RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 NBPF6Q5VWK0 638 aa6.03□□□□□ -1.44
SCN3A-203ENST00000409101 NBPF5PQ86XG9 351 aaPredicted RBP6.03□□□□□ -1.44
SCN3A-203ENST00000409101 NBPF4Q96M43 638 aa6.03□□□□□ -1.44
SCN3A-203ENST00000409101 CCDC69A6NI79 296 aa6.02□□□□□ -1.44
SCN3A-203ENST00000409101 MCM10Q7L590 875 aa6.02□□□□□ -1.44
SCN3A-203ENST00000409101 DZIP1Q86YF9 867 aaKnown RBP6.02□□□□□ -1.44
SCN3A-203ENST00000409101 PANK1Q8TE04 598 aa6.02□□□□□ -1.44
SCN3A-203ENST00000409101 ZNF287Q9HBT7 754 aa6.02□□□□□ -1.44
SCN3A-203ENST00000409101 GPATCH8Q9UKJ3 1502 aaKnown RBP6.02□□□□□ -1.44
SCN3A-203ENST00000409101 ANKRD18BA2A2Z9 1011 aa6.02□□□□□ -1.45
SCN3A-203ENST00000409101 SLC5A1P13866 664 aa6.02□□□□□ -1.45
SCN3A-203ENST00000409101 WDR63Q8IWG1 891 aa6.02□□□□□ -1.45
SCN3A-203ENST00000409101 TDO2P48775 406 aa6.02□□□□□ -1.45
SCN3A-203ENST00000409101 AACSQ86V21 672 aa6.02□□□□□ -1.45
SCN3A-203ENST00000409101 MIS18AQ9NYP9 233 aa6.02□□□□□ -1.45
SCN3A-203ENST00000409101 POLR3DP05423 398 aaPredicted RBP6.02□□□□□ -1.45
SCN3A-203ENST00000409101 GRM1Q13255 1194 aa6.02□□□□□ -1.45
SCN3A-203ENST00000409101 SMC3Q9UQE7 1217 aa6.02□□□□□ -1.45
SCN3A-203ENST00000409101 CDC45O75419 566 aa6.02□□□□□ -1.45
SCN3A-203ENST00000409101 IL2RBP14784 551 aa6.02□□□□□ -1.45
SCN3A-203ENST00000409101 LNPKQ9C0E8 428 aa6.02□□□□□ -1.45
SCN3A-203ENST00000409101 A0A0U1RQG5 324 aaPredicted RBP6.02□□□□□ -1.45
SCN3A-203ENST00000409101 IFIT5Q13325 482 aaKnown RBP6.02□□□□□ -1.45
SCN3A-203ENST00000409101 EMILIN1Q9Y6C2 1016 aa6.02□□□□□ -1.45
SCN3A-203ENST00000409101 SETDB2Q96T68 719 aa6.01□□□□□ -1.45
SCN3A-203ENST00000409101 CDC5LQ99459 802 aaKnown RBP6.01□□□□□ -1.45
SCN3A-203ENST00000409101 CDCA7Q9BWT1 371 aaPredicted RBP6.01□□□□□ -1.45
SCN3A-203ENST00000409101 LRRCC1Q9C099 1032 aa6.01□□□□□ -1.45
SCN3A-203ENST00000409101 HYPKQ9NX55 129 aa6.01□□□□□ -1.45
SCN3A-203ENST00000409101 UGGT2Q9NYU1 1516 aa6.01□□□□□ -1.45
SCN3A-203ENST00000409101 KRT18P05783 430 aaKnown RBP6.01□□□□□ -1.45
SCN3A-203ENST00000409101 CT47B1P0C2W7 299 aaPredicted RBP6.01□□□□□ -1.45
SCN3A-203ENST00000409101 DUSP27Q5VZP5 1158 aa6.01□□□□□ -1.45
SCN3A-203ENST00000409101 C1orf115Q9H7X2 142 aa6.01□□□□□ -1.45
SCN3A-203ENST00000409101 HDAC9Q9UKV0 1011 aa6.01□□□□□ -1.45
SCN3A-203ENST00000409101 SCAF11Q99590 1463 aaKnown RBP6.01□□□□□ -1.45
SCN3A-203ENST00000409101 PPIP5K1Q6PFW1 1433 aa6.01□□□□□ -1.45
SCN3A-203ENST00000409101 GPTP24298 496 aa6.01□□□□□ -1.45
SCN3A-203ENST00000409101 CABLES1Q8TDN4 633 aa6.01□□□□□ -1.45
SCN3A-203ENST00000409101 ABCF2Q9UG63 623 aa6.01□□□□□ -1.45
SCN3A-203ENST00000409101 TRAPPC8Q9Y2L5 1435 aa6.01□□□□□ -1.45
SCN3A-203ENST00000409101 USP21Q9UK80 565 aa6.01□□□□□ -1.45
SCN3A-203ENST00000409101 EPS15P42566 896 aa6.01□□□□□ -1.45
SCN3A-203ENST00000409101 AIDAQ96BJ3 306 aa6.01□□□□□ -1.45
SCN3A-203ENST00000409101 MYCNP04198 464 aaPredicted RBP6□□□□□ -1.45
SCN3A-203ENST00000409101 LMOD1P29536 600 aaPredicted RBP6□□□□□ -1.45
SCN3A-203ENST00000409101 ZNF76P36508 570 aa6□□□□□ -1.45
SCN3A-203ENST00000409101 BAG6P46379 1132 aa6□□□□□ -1.45
SCN3A-203ENST00000409101 FOXD4L6Q3SYB3 417 aaPredicted RBP6□□□□□ -1.45
SCN3A-203ENST00000409101 FOXD4L3Q6VB84 417 aaPredicted RBP6□□□□□ -1.45
SCN3A-203ENST00000409101 NUP153P49790 1475 aaKnown RBP6□□□□□ -1.45
SCN3A-203ENST00000409101 ZFYVE16Q7Z3T8 1539 aa6□□□□□ -1.45
SCN3A-203ENST00000409101 CTTNBP2Q8WZ74 1663 aa6□□□□□ -1.45
SCN3A-203ENST00000409101 SRGAP3O43295 1099 aa6□□□□□ -1.45
SCN3A-203ENST00000409101 IDH1O75874 414 aaKnown RBP6□□□□□ -1.45
SCN3A-203ENST00000409101 WDR78Q5VTH9 848 aa6□□□□□ -1.45
SCN3A-203ENST00000409101 BTG4Q9NY30 223 aa6□□□□□ -1.45
SCN3A-203ENST00000409101 RTCBQ9Y3I0 505 aaKnown RBP6□□□□□ -1.45
SCN3A-203ENST00000409101 GOLGA6L19H0YKK7 550 aa6□□□□□ -1.45
SCN3A-203ENST00000409101 KCNA6P17658 529 aa6□□□□□ -1.45
SCN3A-203ENST00000409101 NF2P35240 595 aa6□□□□□ -1.45
SCN3A-203ENST00000409101 IFT57Q9NWB7 429 aa6□□□□□ -1.45
SCN3A-203ENST00000409101 PBRM1Q86U86 1689 aa6□□□□□ -1.45
SCN3A-203ENST00000409101 VPS37CA5D8V6 355 aaPredicted RBP6□□□□□ -1.45
SCN3A-203ENST00000409101 NUP133Q8WUM0 1156 aa6□□□□□ -1.45
SCN3A-203ENST00000409101 ZBTB3Q9H5J0 574 aa6□□□□□ -1.45
SCN3A-203ENST00000409101 NSD2O96028 1365 aa6□□□□□ -1.45
SCN3A-203ENST00000409101 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6□□□□□ -1.45
SCN3A-203ENST00000409101 BECN2A8MW95 431 aa6□□□□□ -1.45
SCN3A-203ENST00000409101 BICD2Q8TD16 824 aa6□□□□□ -1.45
SCN3A-203ENST00000409101 GCC1Q96CN9 775 aa6□□□□□ -1.45
SCN3A-203ENST00000409101 UBAC1Q9BSL1 405 aa6□□□□□ -1.45
SCN3A-203ENST00000409101 NYXQ9GZU5 481 aa6□□□□□ -1.45
SCN3A-203ENST00000409101 GZF1Q9H116 711 aaPredicted RBP6□□□□□ -1.45
SCN3A-203ENST00000409101 MAP3K1Q13233 1512 aa6□□□□□ -1.45
SCN3A-203ENST00000409101 SNRPA1P09661 255 aaKnown RBP5.99□□□□□ -1.45
SCN3A-203ENST00000409101 GLIPR1L2Q4G1C9 344 aa5.99□□□□□ -1.45
SCN3A-203ENST00000409101 CEP170Q5SW79 1584 aa5.99□□□□□ -1.45
SCN3A-203ENST00000409101 TXLNAP40222 546 aa5.99□□□□□ -1.45
SCN3A-203ENST00000409101 ATF7IPQ6VMQ6 1270 aa5.99□□□□□ -1.45
SCN3A-203ENST00000409101 TRIM22Q8IYM9 498 aa5.99□□□□□ -1.45
SCN3A-203ENST00000409101 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.99□□□□□ -1.45
SCN3A-203ENST00000409101 CTNNA3Q9UI47 895 aa5.99□□□□□ -1.45
SCN3A-203ENST00000409101 NUP160Q12769 1436 aa5.99□□□□□ -1.45
SCN3A-203ENST00000409101 TRPM2O94759 1503 aa5.99□□□□□ -1.45
SCN3A-203ENST00000409101 CFAP74Q9C0B2 1584 aa5.99□□□□□ -1.45
SCN3A-203ENST00000409101 IBSPP21815 317 aaPredicted RBP5.99□□□□□ -1.45
SCN3A-203ENST00000409101 TMPOP42166 694 aaKnown RBP5.99□□□□□ -1.45
SCN3A-203ENST00000409101 TNIP1Q15025 636 aa5.99□□□□□ -1.45
SCN3A-203ENST00000409101 CCDC152Q4G0S7 254 aa5.99□□□□□ -1.45
SCN3A-203ENST00000409101 CT47A1Q5JQC4 288 aaPredicted RBP5.99□□□□□ -1.45
SCN3A-203ENST00000409101 JDP2Q8WYK2 163 aa5.99□□□□□ -1.45
SCN3A-203ENST00000409101 CWC25Q9NXE8 425 aaPredicted RBP5.99□□□□□ -1.45
SCN3A-203ENST00000409101 MAP4K4O95819 1239 aaPredicted RBP5.98□□□□□ -1.45
SCN3A-203ENST00000409101 CHMP4BP1P59074 171 aa5.98□□□□□ -1.45
SCN3A-203ENST00000409101 ODF2Q5BJF6 829 aa5.98□□□□□ -1.45
SCN3A-203ENST00000409101 MKNK2Q9HBH9 465 aa5.98□□□□□ -1.45
SCN3A-203ENST00000409101 PCDH11XQ9BZA7 1347 aa5.98□□□□□ -1.45
SCN3A-203ENST00000409101 PCDH11YQ9BZA8 1340 aa5.98□□□□□ -1.45
SCN3A-203ENST00000409101 TRAPPC3LQ5T215 181 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms