RNA–Protein interactions for RNA: ENST00000409057.5

PBRM1-205, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-205ENST00000409057 JAKMIP1Q96N16 626 aaKnown RBP12.64□□□□□ -0.39
PBRM1-205ENST00000409057 NUDT16Q96DE0 195 aaKnown RBP12.63□□□□□ -0.39
PBRM1-205ENST00000409057 TSPYL1Q9H0U9 437 aa12.63□□□□□ -0.39
PBRM1-205ENST00000409057 NKTRP30414 1462 aaKnown RBP12.63□□□□□ -0.39
PBRM1-205ENST00000409057 ABCC11Q96J66 1382 aa12.63□□□□□ -0.39
PBRM1-205ENST00000409057 KIF2AO00139 706 aaPredicted RBP12.63□□□□□ -0.39
PBRM1-205ENST00000409057 PDCL3Q9H2J4 239 aa12.63□□□□□ -0.39
PBRM1-205ENST00000409057 KRT32Q14532 448 aa12.63□□□□□ -0.39
PBRM1-205ENST00000409057 TNPO1Q92973 898 aaKnown RBP12.63□□□□□ -0.39
PBRM1-205ENST00000409057 UPF3BQ9BZI7 483 aaKnown RBP12.63□□□□□ -0.39
PBRM1-205ENST00000409057 KDM4AO75164 1064 aa12.62□□□□□ -0.39
PBRM1-205ENST00000409057 MAP4K4O95819 1239 aaPredicted RBP12.62□□□□□ -0.39
PBRM1-205ENST00000409057 LRPPRCP42704 1394 aaKnown RBP12.62□□□□□ -0.39
PBRM1-205ENST00000409057 CCDC158Q5M9N0 1113 aa12.62□□□□□ -0.39
PBRM1-205ENST00000409057 TAF3Q5VWG9 929 aa12.62□□□□□ -0.39
PBRM1-205ENST00000409057 EXOC6BQ9Y2D4 811 aa12.62□□□□□ -0.39
PBRM1-205ENST00000409057 FAM177BA6PVY3 158 aa12.62□□□□□ -0.39
PBRM1-205ENST00000409057 KIF6Q6ZMV9 814 aa12.62□□□□□ -0.39
PBRM1-205ENST00000409057 UBXN4Q92575 508 aa12.62□□□□□ -0.39
PBRM1-205ENST00000409057 ALDH1L2Q3SY69 923 aa12.61□□□□□ -0.39
PBRM1-205ENST00000409057 CWC27Q6UX04 472 aaKnown RBP12.61□□□□□ -0.39
PBRM1-205ENST00000409057 CCDC43Q96MW1 224 aaKnown RBP12.61□□□□□ -0.39
PBRM1-205ENST00000409057 RBM42Q9BTD8 480 aaKnown RBP12.61□□□□□ -0.39
PBRM1-205ENST00000409057 DUSP27Q5VZP5 1158 aa12.61□□□□□ -0.39
PBRM1-205ENST00000409057 AACSQ86V21 672 aa12.61□□□□□ -0.39
PBRM1-205ENST00000409057 TRIM22Q8IYM9 498 aa12.61□□□□□ -0.39
PBRM1-205ENST00000409057 CCDC183Q5T5S1 534 aa12.61□□□□□ -0.39
PBRM1-205ENST00000409057 CUL7Q14999 1698 aa12.61□□□□□ -0.39
PBRM1-205ENST00000409057 FAM177A1Q8N128 213 aaPredicted RBP12.6□□□□□ -0.39
PBRM1-205ENST00000409057 SMTNL1A8MU46 457 aa12.6□□□□□ -0.39
PBRM1-205ENST00000409057 MCM5P33992 734 aa12.6□□□□□ -0.39
PBRM1-205ENST00000409057 CNNM1Q9NRU3 951 aa12.6□□□□□ -0.39
PBRM1-205ENST00000409057 SSFA2P28290 1259 aa12.6□□□□□ -0.39
PBRM1-205ENST00000409057 CABP4P57796 275 aa12.6□□□□□ -0.39
PBRM1-205ENST00000409057 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.6□□□□□ -0.391e-6■■■■■ 30.9
PBRM1-205ENST00000409057 ADGRF5Q8IZF2 1346 aa12.6□□□□□ -0.39
PBRM1-205ENST00000409057 TTC39AQ5SRH9 613 aa12.6□□□□□ -0.39
PBRM1-205ENST00000409057 MYL6BP14649 208 aa12.59□□□□□ -0.39
PBRM1-205ENST00000409057 XPCQ01831 940 aaPredicted RBP12.59□□□□□ -0.39
PBRM1-205ENST00000409057 LUC7LQ9NQ29 371 aaKnown RBP12.59□□□□□ -0.39
PBRM1-205ENST00000409057 CTDP1Q9Y5B0 961 aaPredicted RBP12.59□□□□□ -0.39
PBRM1-205ENST00000409057 PTPN14Q15678 1187 aa12.59□□□□□ -0.39
PBRM1-205ENST00000409057 ODF2Q5BJF6 829 aa12.59□□□□□ -0.39
PBRM1-205ENST00000409057 WAPLQ7Z5K2 1190 aa12.59□□□□□ -0.39
PBRM1-205ENST00000409057 SCAND2PQ9GZW5 306 aaPredicted RBP12.59□□□□□ -0.39
PBRM1-205ENST00000409057 KIAA0754O94854 1291 aa12.59□□□□□ -0.39
PBRM1-205ENST00000409057 MCM10Q7L590 875 aa12.59□□□□□ -0.39
PBRM1-205ENST00000409057 SPG7Q9UQ90 795 aa12.59□□□□□ -0.39
PBRM1-205ENST00000409057 CASTP20810 708 aaKnown RBP12.59□□□□□ -0.39
PBRM1-205ENST00000409057 STRN4Q9NRL3 753 aa12.59□□□□□ -0.39
PBRM1-205ENST00000409057 MTMR7Q9Y216 660 aa12.59□□□□□ -0.39
PBRM1-205ENST00000409057 STIM1Q13586 685 aa12.58□□□□□ -0.4
PBRM1-205ENST00000409057 HSP90AB2PQ58FF8 381 aa12.58□□□□□ -0.4
PBRM1-205ENST00000409057 PLEKHH1Q9ULM0 1364 aa12.58□□□□□ -0.4
PBRM1-205ENST00000409057 BTBD11A6QL63 1104 aa12.58□□□□□ -0.4
PBRM1-205ENST00000409057 GNAT3A8MTJ3 354 aa12.58□□□□□ -0.4
PBRM1-205ENST00000409057 CDKL5O76039 1030 aa12.58□□□□□ -0.4
PBRM1-205ENST00000409057 MX1P20591 662 aa12.58□□□□□ -0.4
PBRM1-205ENST00000409057 MIS18AQ9NYP9 233 aa12.58□□□□□ -0.4
PBRM1-205ENST00000409057 GOLGA6L10A6NI86 522 aa12.58□□□□□ -0.4
PBRM1-205ENST00000409057 TMCO3Q6UWJ1 677 aa12.58□□□□□ -0.4
PBRM1-205ENST00000409057 SFPQP23246 707 aaKnown RBP eCLIP12.58□□□□□ -0.4
PBRM1-205ENST00000409057 CALRP27797 417 aaKnown RBP12.58□□□□□ -0.4
PBRM1-205ENST00000409057 TXLNBQ8N3L3 684 aa12.58□□□□□ -0.4
PBRM1-205ENST00000409057 TBC1D32Q96NH3 1257 aa12.58□□□□□ -0.4
PBRM1-205ENST00000409057 CTNNA3Q9UI47 895 aa12.58□□□□□ -0.4
PBRM1-205ENST00000409057 KIF18AQ8NI77 898 aa12.57□□□□□ -0.4
PBRM1-205ENST00000409057 CDK5RAP3Q96JB5 506 aa12.57□□□□□ -0.4
PBRM1-205ENST00000409057 FERMT3Q86UX7 667 aa12.57□□□□□ -0.4
PBRM1-205ENST00000409057 SLC3A2P08195 630 aaKnown RBP12.57□□□□□ -0.4
PBRM1-205ENST00000409057 CCDC181Q5TID7 509 aa12.57□□□□□ -0.4
PBRM1-205ENST00000409057 KIF1BPQ96EK5 621 aa12.57□□□□□ -0.4
PBRM1-205ENST00000409057 CEP126Q9P2H0 1117 aa12.57□□□□□ -0.4
PBRM1-205ENST00000409057 SKIDA1Q1XH10 827 aa12.57□□□□□ -0.4
PBRM1-205ENST00000409057 TOM1L2Q6ZVM7 507 aa12.57□□□□□ -0.4
PBRM1-205ENST00000409057 DHX29Q7Z478 1369 aaKnown RBP12.56□□□□□ -0.4
PBRM1-205ENST00000409057 GLRX3O76003 335 aaKnown RBP12.56□□□□□ -0.4
PBRM1-205ENST00000409057 ERLIN2O94905 339 aa12.56□□□□□ -0.4
PBRM1-205ENST00000409057 TRIM27P14373 513 aa12.56□□□□□ -0.4
PBRM1-205ENST00000409057 CCDC57Q2TAC2 916 aa12.56□□□□□ -0.4
PBRM1-205ENST00000409057 NME9Q86XW9 330 aa12.56□□□□□ -0.4
PBRM1-205ENST00000409057 CCAR1Q8IX12 1150 aaKnown RBP12.56□□□□□ -0.4
PBRM1-205ENST00000409057 NACAP1Q9BZK3 213 aa12.56□□□□□ -0.4
PBRM1-205ENST00000409057 SH2B1Q9NRF2 756 aaPredicted RBP12.56□□□□□ -0.4
PBRM1-205ENST00000409057 USP8P40818 1118 aa12.56□□□□□ -0.4
PBRM1-205ENST00000409057 CAMK4Q16566 473 aa12.56□□□□□ -0.4
PBRM1-205ENST00000409057 BMP2KLQ5H9B9 411 aa12.56□□□□□ -0.4
PBRM1-205ENST00000409057 NUTM1Q86Y26 1132 aa12.56□□□□□ -0.4
PBRM1-205ENST00000409057 CBX1P83916 185 aa12.56□□□□□ -0.4
PBRM1-205ENST00000409057 KLHL40Q2TBA0 621 aa12.56□□□□□ -0.4
PBRM1-205ENST00000409057 CCDC83Q8IWF9 413 aa12.56□□□□□ -0.4
PBRM1-205ENST00000409057 DDX54Q8TDD1 881 aaKnown RBP12.56□□□□□ -0.4
PBRM1-205ENST00000409057 EMILIN1Q9Y6C2 1016 aa12.56□□□□□ -0.4
PBRM1-205ENST00000409057 SCAF11Q99590 1463 aaKnown RBP12.56□□□□□ -0.4
PBRM1-205ENST00000409057 IQCEQ6IPM2 695 aa12.56□□□□□ -0.4
PBRM1-205ENST00000409057 DEF6Q9H4E7 631 aa12.56□□□□□ -0.4
PBRM1-205ENST00000409057 KIF14Q15058 1648 aa12.55□□□□□ -0.4
PBRM1-205ENST00000409057 ERICH4A6NGS2 130 aa12.55□□□□□ -0.4
PBRM1-205ENST00000409057 CFAP100Q494V2 611 aa12.55□□□□□ -0.4
PBRM1-205ENST00000409057 ANKLE2Q86XL3 938 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms