RNA–Protein interactions for RNA: ENST00000409036.5

RAPGEF4-204, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 5 BASIC

Gene RAPGEF4, Length 3,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-204ENST00000409036 PLEKHG5O94827 1062 aa7.94□□□□□ -1.14
RAPGEF4-204ENST00000409036 EIF4A2Q14240 407 aaKnown RBP7.94□□□□□ -1.14
RAPGEF4-204ENST00000409036 L1TD1Q5T7N2 865 aaKnown RBP7.94□□□□□ -1.14
RAPGEF4-204ENST00000409036 PHF8Q9UPP1 1060 aa7.94□□□□□ -1.14
RAPGEF4-204ENST00000409036 GOLGA6L3A6NEY3 463 aa7.94□□□□□ -1.14
RAPGEF4-204ENST00000409036 TRPM3Q9HCF6 1732 aaPredicted RBP7.94□□□□□ -1.14
RAPGEF4-204ENST00000409036 NCAPD2Q15021 1401 aa7.93□□□□□ -1.14
RAPGEF4-204ENST00000409036 ATF7IPQ6VMQ6 1270 aa7.93□□□□□ -1.14
RAPGEF4-204ENST00000409036 SOX12O15370 315 aa7.93□□□□□ -1.14
RAPGEF4-204ENST00000409036 EXOSC9Q06265 439 aaKnown RBP7.93□□□□□ -1.14
RAPGEF4-204ENST00000409036 API5Q9BZZ5 524 aaKnown RBP7.93□□□□□ -1.14
RAPGEF4-204ENST00000409036 FAM208AQ9UK61 1670 aaKnown RBP7.93□□□□□ -1.14
RAPGEF4-204ENST00000409036 GOLGA6L22H0YM25 854 aa7.93□□□□□ -1.14
RAPGEF4-204ENST00000409036 HDAC1Q13547 482 aaPredicted RBP7.92□□□□□ -1.14
RAPGEF4-204ENST00000409036 MAP3K19Q56UN5 1328 aa7.92□□□□□ -1.14
RAPGEF4-204ENST00000409036 MED1Q15648 1581 aaPredicted RBP7.91□□□□□ -1.14
RAPGEF4-204ENST00000409036 LTN1O94822 1766 aa7.91□□□□□ -1.14
RAPGEF4-204ENST00000409036 AMPHP49418 695 aa7.91□□□□□ -1.14
RAPGEF4-204ENST00000409036 PTPRCP08575 1304 aa7.91□□□□□ -1.14
RAPGEF4-204ENST00000409036 ARID3AQ99856 593 aa7.91□□□□□ -1.14
RAPGEF4-204ENST00000409036 USP19O94966 1318 aa7.9□□□□□ -1.14
RAPGEF4-204ENST00000409036 RRS1Q15050 365 aaKnown RBP7.9□□□□□ -1.14
RAPGEF4-204ENST00000409036 ALS2Q96Q42 1657 aa7.9□□□□□ -1.14
RAPGEF4-204ENST00000409036 N4BP2Q86UW6 1770 aaPredicted RBP7.9□□□□□ -1.14
RAPGEF4-204ENST00000409036 CRB1P82279 1406 aa7.9□□□□□ -1.15
RAPGEF4-204ENST00000409036 CHL1O00533 1208 aa7.9□□□□□ -1.15
RAPGEF4-204ENST00000409036 HOXC9P31274 260 aa7.9□□□□□ -1.15
RAPGEF4-204ENST00000409036 NLRP6P59044 892 aa7.9□□□□□ -1.15
RAPGEF4-204ENST00000409036 PSME1Q06323 249 aa7.9□□□□□ -1.15
RAPGEF4-204ENST00000409036 SSH1Q8WYL5 1049 aa7.9□□□□□ -1.15
RAPGEF4-204ENST00000409036 IP6K1Q92551 441 aa7.9□□□□□ -1.15
RAPGEF4-204ENST00000409036 LMO7Q8WWI1 1683 aa7.9□□□□□ -1.15
RAPGEF4-204ENST00000409036 NCKAP5LQ9HCH0 1330 aa7.9□□□□□ -1.15
RAPGEF4-204ENST00000409036 VAMP4O75379 141 aa7.89□□□□□ -1.15
RAPGEF4-204ENST00000409036 SULT6B1Q6IMI4 303 aa7.89□□□□□ -1.15
RAPGEF4-204ENST00000409036 MRPL50Q8N5N7 158 aaKnown RBP7.89□□□□□ -1.15
RAPGEF4-204ENST00000409036 RTF1Q92541 710 aaKnown RBP7.89□□□□□ -1.15
RAPGEF4-204ENST00000409036 ZRANB1Q9UGI0 708 aa7.89□□□□□ -1.15
RAPGEF4-204ENST00000409036 PDZRN3Q9UPQ7 1066 aa7.89□□□□□ -1.15
RAPGEF4-204ENST00000409036 C1orf167Q5SNV9 1468 aa7.89□□□□□ -1.15
RAPGEF4-204ENST00000409036 ABCC4O15439 1325 aa7.89□□□□□ -1.15
RAPGEF4-204ENST00000409036 PXDNLA1KZ92 1463 aa7.89□□□□□ -1.15
RAPGEF4-204ENST00000409036 PHACTR3Q96KR7 559 aa7.89□□□□□ -1.15
RAPGEF4-204ENST00000409036 LNPKQ9C0E8 428 aa7.89□□□□□ -1.15
RAPGEF4-204ENST00000409036 C19orf44Q9H6X5 657 aa7.89□□□□□ -1.15
RAPGEF4-204ENST00000409036 HMOX1P09601 288 aa7.89□□□□□ -1.15
RAPGEF4-204ENST00000409036 TSR2Q969E8 191 aaKnown RBP7.89□□□□□ -1.15
RAPGEF4-204ENST00000409036 MBIPQ9NS73 344 aa7.89□□□□□ -1.15
RAPGEF4-204ENST00000409036 IGHDP01880 384 aa7.88□□□□□ -1.15
RAPGEF4-204ENST00000409036 TRIM27P14373 513 aa7.88□□□□□ -1.15
RAPGEF4-204ENST00000409036 TWISTNBQ3B726 338 aaPredicted RBP7.88□□□□□ -1.15
RAPGEF4-204ENST00000409036 ANKRD45Q5TZF3 282 aa7.88□□□□□ -1.15
RAPGEF4-204ENST00000409036 MAP3K5Q99683 1374 aa7.88□□□□□ -1.15
RAPGEF4-204ENST00000409036 FOXD4L5Q5VV16 416 aaPredicted RBP7.88□□□□□ -1.15
RAPGEF4-204ENST00000409036 ABTB2Q8N961 1025 aa7.88□□□□□ -1.15
RAPGEF4-204ENST00000409036 FOXD4L4Q8WXT5 416 aaPredicted RBP7.88□□□□□ -1.15
RAPGEF4-204ENST00000409036 CACNA1FO60840 1977 aa7.88□□□□□ -1.15
RAPGEF4-204ENST00000409036 HOXB7P09629 217 aa7.88□□□□□ -1.15
RAPGEF4-204ENST00000409036 PRKCSHP14314 528 aaPredicted RBP7.87□□□□□ -1.15
RAPGEF4-204ENST00000409036 PLCB2Q00722 1185 aa7.87□□□□□ -1.15
RAPGEF4-204ENST00000409036 GCC1Q96CN9 775 aa7.87□□□□□ -1.15
RAPGEF4-204ENST00000409036 NOB1Q9ULX3 412 aaKnown RBP7.87□□□□□ -1.15
RAPGEF4-204ENST00000409036 C22orf23Q9BZE7 217 aa7.87□□□□□ -1.15
RAPGEF4-204ENST00000409036 PTMAP06454 111 aaKnown RBP7.87□□□□□ -1.15
RAPGEF4-204ENST00000409036 AMOTQ4VCS5 1084 aa7.87□□□□□ -1.15
RAPGEF4-204ENST00000409036 MSH6P52701 1360 aa7.87□□□□□ -1.15
RAPGEF4-204ENST00000409036 ADAMTS7Q9UKP4 1686 aa7.87□□□□□ -1.15
RAPGEF4-204ENST00000409036 HSP90AB2PQ58FF8 381 aa7.86□□□□□ -1.15
RAPGEF4-204ENST00000409036 IBTKQ9P2D0 1353 aaPredicted RBP7.86□□□□□ -1.15
RAPGEF4-204ENST00000409036 GNAT3A8MTJ3 354 aa7.86□□□□□ -1.15
RAPGEF4-204ENST00000409036 ZBTB40Q9NUA8 1239 aa7.86□□□□□ -1.15
RAPGEF4-204ENST00000409036 DNTTIP2Q5QJE6 756 aaKnown RBP7.86□□□□□ -1.15
RAPGEF4-204ENST00000409036 NOL8Q76FK4 1167 aaKnown RBP7.86□□□□□ -1.15
RAPGEF4-204ENST00000409036 SMC5Q8IY18 1101 aa7.86□□□□□ -1.15
RAPGEF4-204ENST00000409036 CADPS2Q86UW7 1296 aa7.86□□□□□ -1.15
RAPGEF4-204ENST00000409036 PROSER2Q86WR7 435 aaPredicted RBP7.86□□□□□ -1.15
RAPGEF4-204ENST00000409036 GBP4Q96PP9 640 aa7.86□□□□□ -1.15
RAPGEF4-204ENST00000409036 EYA1Q99502 592 aa7.86□□□□□ -1.15
RAPGEF4-204ENST00000409036 FOXD4L6Q3SYB3 417 aaPredicted RBP7.85□□□□□ -1.15
RAPGEF4-204ENST00000409036 INTS3Q68E01 1043 aaKnown RBP7.85□□□□□ -1.15
RAPGEF4-204ENST00000409036 FOXD4L3Q6VB84 417 aaPredicted RBP7.85□□□□□ -1.15
RAPGEF4-204ENST00000409036 RLBP1P12271 317 aa7.85□□□□□ -1.15
RAPGEF4-204ENST00000409036 KDM3BQ7LBC6 1761 aa7.85□□□□□ -1.15
RAPGEF4-204ENST00000409036 CEMIPQ8WUJ3 1361 aa7.85□□□□□ -1.15
RAPGEF4-204ENST00000409036 SEC24BO95487 1268 aa7.85□□□□□ -1.15
RAPGEF4-204ENST00000409036 C8orf34Q49A92 452 aa7.85□□□□□ -1.15
RAPGEF4-204ENST00000409036 ESCO1Q5FWF5 840 aa7.85□□□□□ -1.15
RAPGEF4-204ENST00000409036 TNNQ9UQP3 1299 aa7.85□□□□□ -1.15
RAPGEF4-204ENST00000409036 NPHP3Q7Z494 1330 aa7.84□□□□□ -1.15
RAPGEF4-204ENST00000409036 CRYBG1Q9Y4K1 1723 aa7.84□□□□□ -1.15
RAPGEF4-204ENST00000409036 TNS3Q68CZ2 1445 aa7.84□□□□□ -1.15
RAPGEF4-204ENST00000409036 NUTM2FA1L443 756 aa7.84□□□□□ -1.15
RAPGEF4-204ENST00000409036 ATF3P18847 181 aa7.84□□□□□ -1.15
RAPGEF4-204ENST00000409036 MSNP26038 577 aaKnown RBP7.84□□□□□ -1.15
RAPGEF4-204ENST00000409036 C14orf37Q86TY3 774 aa7.84□□□□□ -1.15
RAPGEF4-204ENST00000409036 C1orf115Q9H7X2 142 aa7.84□□□□□ -1.15
RAPGEF4-204ENST00000409036 CHMP5Q9NZZ3 219 aa7.84□□□□□ -1.15
RAPGEF4-204ENST00000409036 TRAK2O60296 914 aa7.84□□□□□ -1.16
RAPGEF4-204ENST00000409036 PLEKHO1Q53GL0 409 aaPredicted RBP7.84□□□□□ -1.16
RAPGEF4-204ENST00000409036 TMEM57Q8N5G2 664 aa7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms