RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 SPG7Q9UQ90 795 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 UGGT1Q9NYU2 1555 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 VPS13CQ709C8 3753 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 A2MP01023 1474 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 ARHGAP31Q2M1Z3 1444 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 NUTM2BA6NNL0 878 aaPredicted RBP4.61□□□□□ -1.67
RGPD4-201ENST00000408999 NUTM2EB1AL46 878 aaPredicted RBP4.61□□□□□ -1.67
RGPD4-201ENST00000408999 CABP4P57796 275 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 TOM1L2Q6ZVM7 507 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 NUTM2AQ8IVF1 878 aaPredicted RBP4.61□□□□□ -1.67
RGPD4-201ENST00000408999 WDR63Q8IWG1 891 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 ADGBQ8N7X0 1667 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 RALGAPBQ86X10 1494 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 SAMD9Q5K651 1589 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 MAST1Q9Y2H9 1570 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 KIF3AQ9Y496 699 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 TRAPPC8Q9Y2L5 1435 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 CDC45O75419 566 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 PHF14O94880 888 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 APPP05067 770 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 VPS53Q5VIR6 699 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.61□□□□□ -1.67
RGPD4-201ENST00000408999 TRIM34Q9BYJ4 488 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 DCHS2Q6V1P9 2916 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 ZKSCAN1P17029 563 aaPredicted RBP4.6□□□□□ -1.67
RGPD4-201ENST00000408999 CEBPAP49715 358 aaPredicted RBP4.6□□□□□ -1.67
RGPD4-201ENST00000408999 ZNF530Q6P9A1 599 aaPredicted RBP4.6□□□□□ -1.67
RGPD4-201ENST00000408999 NEUROD6Q96NK8 337 aa4.6□□□□□ -1.67
RGPD4-201ENST00000408999 PREX1Q8TCU6 1659 aa4.6□□□□□ -1.67
RGPD4-201ENST00000408999 TNRQ92752 1358 aa4.6□□□□□ -1.67
RGPD4-201ENST00000408999 SLC4A2P04920 1241 aa4.6□□□□□ -1.67
RGPD4-201ENST00000408999 SYNE3Q6ZMZ3 975 aa4.6□□□□□ -1.67
RGPD4-201ENST00000408999 NUP160Q12769 1436 aa4.6□□□□□ -1.67
RGPD4-201ENST00000408999 DTNBO60941 627 aa4.6□□□□□ -1.67
RGPD4-201ENST00000408999 PIP4K2BP78356 416 aa4.6□□□□□ -1.67
RGPD4-201ENST00000408999 FOXD4L6Q3SYB3 417 aaPredicted RBP4.6□□□□□ -1.67
RGPD4-201ENST00000408999 FOXD4L3Q6VB84 417 aaPredicted RBP4.6□□□□□ -1.67
RGPD4-201ENST00000408999 RBM33Q96EV2 1170 aaKnown RBP4.6□□□□□ -1.67
RGPD4-201ENST00000408999 PPP6R1Q9UPN7 881 aa4.6□□□□□ -1.67
RGPD4-201ENST00000408999 SETD1AO15047 1707 aaKnown RBP4.6□□□□□ -1.67
RGPD4-201ENST00000408999 BTBD11A6QL63 1104 aa4.6□□□□□ -1.67
RGPD4-201ENST00000408999 AKAP17AQ02040 695 aaKnown RBP4.6□□□□□ -1.67
RGPD4-201ENST00000408999 NME9Q86XW9 330 aa4.6□□□□□ -1.67
RGPD4-201ENST00000408999 DDX54Q8TDD1 881 aaKnown RBP4.6□□□□□ -1.67
RGPD4-201ENST00000408999 MAGI2Q86UL8 1455 aa4.6□□□□□ -1.67
RGPD4-201ENST00000408999 RAD21O60216 631 aa4.59□□□□□ -1.67
RGPD4-201ENST00000408999 GNAI3P08754 354 aa4.59□□□□□ -1.67
RGPD4-201ENST00000408999 SF3A1Q15459 793 aaKnown RBP4.59□□□□□ -1.67
RGPD4-201ENST00000408999 RNF20Q5VTR2 975 aa4.59□□□□□ -1.67
RGPD4-201ENST00000408999 MCTP1Q6DN14 999 aa4.59□□□□□ -1.67
RGPD4-201ENST00000408999 CNTROBQ8N137 903 aa4.59□□□□□ -1.67
RGPD4-201ENST00000408999 ZDHHC9Q9Y397 364 aa4.59□□□□□ -1.67
RGPD4-201ENST00000408999 FCHSD2O94868 740 aa4.59□□□□□ -1.67
RGPD4-201ENST00000408999 IDI1Q13907 227 aa4.59□□□□□ -1.67
RGPD4-201ENST00000408999 CCDC34Q96HJ3 373 aa4.59□□□□□ -1.67
RGPD4-201ENST00000408999 PZPP20742 1482 aa4.59□□□□□ -1.67
RGPD4-201ENST00000408999 WASLO00401 505 aaPredicted RBP4.59□□□□□ -1.67
RGPD4-201ENST00000408999 GNAI2P04899 355 aa4.59□□□□□ -1.67
RGPD4-201ENST00000408999 MYL6BP14649 208 aa4.59□□□□□ -1.67
RGPD4-201ENST00000408999 NFE2L2Q16236 605 aa4.59□□□□□ -1.67
RGPD4-201ENST00000408999 HDGFL1Q5TGJ6 251 aa4.59□□□□□ -1.67
RGPD4-201ENST00000408999 NFXL1Q6ZNB6 911 aa4.59□□□□□ -1.67
RGPD4-201ENST00000408999 DNAJC2Q99543 621 aaKnown RBP4.59□□□□□ -1.67
RGPD4-201ENST00000408999 C14orf93Q9H972 538 aaKnown RBP4.59□□□□□ -1.67
RGPD4-201ENST00000408999 PDZRN3Q9UPQ7 1066 aa4.59□□□□□ -1.67
RGPD4-201ENST00000408999 AMOTL2Q9Y2J4 779 aa4.59□□□□□ -1.67
RGPD4-201ENST00000408999 TARBP1Q13395 1621 aaKnown RBP4.59□□□□□ -1.67
RGPD4-201ENST00000408999 GNAT3A8MTJ3 354 aa4.59□□□□□ -1.68
RGPD4-201ENST00000408999 FYB1O15117 783 aa4.59□□□□□ -1.68
RGPD4-201ENST00000408999 MARCH6O60337 910 aa4.59□□□□□ -1.68
RGPD4-201ENST00000408999 RLBP1P12271 317 aa4.59□□□□□ -1.68
RGPD4-201ENST00000408999 CCT4P50991 539 aaKnown RBP4.59□□□□□ -1.68
RGPD4-201ENST00000408999 KIAA2012Q0VF49 1180 aa4.59□□□□□ -1.68
RGPD4-201ENST00000408999 DNAJC14Q6Y2X3 702 aaPredicted RBP4.59□□□□□ -1.68
RGPD4-201ENST00000408999 CREBRFQ8IUR6 639 aa4.59□□□□□ -1.68
RGPD4-201ENST00000408999 ZNF428Q96B54 188 aa4.59□□□□□ -1.68
RGPD4-201ENST00000408999 C22orf23Q9BZE7 217 aa4.59□□□□□ -1.68
RGPD4-201ENST00000408999 ZHX1Q9UKY1 873 aaPredicted RBP4.59□□□□□ -1.68
RGPD4-201ENST00000408999 CT47B1P0C2W7 299 aaPredicted RBP4.59□□□□□ -1.68
RGPD4-201ENST00000408999 FOSBP53539 338 aa4.59□□□□□ -1.68
RGPD4-201ENST00000408999 PDE3AQ14432 1141 aa4.59□□□□□ -1.68
RGPD4-201ENST00000408999 WASHC4Q2M389 1173 aa4.59□□□□□ -1.68
RGPD4-201ENST00000408999 WWC1Q8IX03 1113 aa4.59□□□□□ -1.68
RGPD4-201ENST00000408999 FSD1Q9BTV5 496 aa4.59□□□□□ -1.68
RGPD4-201ENST00000408999 ATP6V1DQ9Y5K8 247 aa4.59□□□□□ -1.68
RGPD4-201ENST00000408999 ARHGEF12Q9NZN5 1544 aa4.59□□□□□ -1.68
RGPD4-201ENST00000408999 PRAG1Q86YV5 1406 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 ABCC10Q5T3U5 1492 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 TRIM29Q14134 588 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 MVPQ14764 893 aaKnown RBP4.58□□□□□ -1.68
RGPD4-201ENST00000408999 CCDC27Q2M243 656 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 USHBP1Q8N6Y0 703 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 KCNH5Q8NCM2 988 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 GCC1Q96CN9 775 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 CCDC61Q9Y6R9 512 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 NSD2O96028 1365 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 SURF6O75683 361 aaKnown RBP4.58□□□□□ -1.68
RGPD4-201ENST00000408999 TMPOP42166 694 aaKnown RBP4.58□□□□□ -1.68
RGPD4-201ENST00000408999 TTC39AQ5SRH9 613 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 CERS3Q8IU89 383 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms