RNA–Protein interactions for RNA: ENST00000407293.5

KRTCAP3-202, Transcript of keratinocyte associated protein 3, humanhuman

TSL 2 BASIC

Gene KRTCAP3, Length 942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-202ENST00000407293 MEGF6O75095 1541 aa24.96■■□□□ 1.59
KRTCAP3-202ENST00000407293 NBPF6Q5VWK0 638 aa24.95■■□□□ 1.58
KRTCAP3-202ENST00000407293 NBPF4Q96M43 638 aa24.95■■□□□ 1.58
KRTCAP3-202ENST00000407293 NSD2O96028 1365 aa24.94■■□□□ 1.58
KRTCAP3-202ENST00000407293 TMF1P82094 1093 aa24.94■■□□□ 1.58
KRTCAP3-202ENST00000407293 PNPLA7Q6ZV29 1317 aa24.93■■□□□ 1.58
KRTCAP3-202ENST00000407293 SLC16A10Q8TF71 515 aa24.93■■□□□ 1.58
KRTCAP3-202ENST00000407293 RTL1A6NKG5 1358 aa24.93■■□□□ 1.58
KRTCAP3-202ENST00000407293 MAP3K5Q99683 1374 aa24.93■■□□□ 1.58
KRTCAP3-202ENST00000407293 USHBP1Q8N6Y0 703 aa24.92■■□□□ 1.58
KRTCAP3-202ENST00000407293 TFCP2L1Q9NZI6 479 aa24.92■■□□□ 1.58
KRTCAP3-202ENST00000407293 SHANK3Q9BYB0 1731 aa24.92■■□□□ 1.58
KRTCAP3-202ENST00000407293 ZNF784Q8NCA9 323 aaPredicted RBP24.91■■□□□ 1.58
KRTCAP3-202ENST00000407293 DOT1LQ8TEK3 1739 aa24.91■■□□□ 1.58
KRTCAP3-202ENST00000407293 USP47Q96K76 1375 aa24.91■■□□□ 1.58
KRTCAP3-202ENST00000407293 HSP90AB2PQ58FF8 381 aa24.88■■□□□ 1.57
KRTCAP3-202ENST00000407293 QSER1Q2KHR3 1735 aa24.88■■□□□ 1.57
KRTCAP3-202ENST00000407293 CGNL1Q0VF96 1302 aa24.87■■□□□ 1.57
KRTCAP3-202ENST00000407293 LY75O60449 1722 aa24.87■■□□□ 1.57
KRTCAP3-202ENST00000407293 POLD1P28340 1107 aa24.87■■□□□ 1.57
KRTCAP3-202ENST00000407293 RAPGEF4Q8WZA2 1011 aa24.87■■□□□ 1.57
KRTCAP3-202ENST00000407293 CCNL1Q9UK58 526 aaPredicted RBP24.87■■□□□ 1.57
KRTCAP3-202ENST00000407293 KLHL34Q8N239 644 aa24.86■■□□□ 1.57
KRTCAP3-202ENST00000407293 TUBGCP6Q96RT7 1819 aa24.85■■□□□ 1.57
KRTCAP3-202ENST00000407293 SMG6Q86US8 1419 aaKnown RBP24.85■■□□□ 1.57
KRTCAP3-202ENST00000407293 INSRP06213 1382 aa24.84■■□□□ 1.57
KRTCAP3-202ENST00000407293 TATP17735 454 aaPredicted RBP24.84■■□□□ 1.57
KRTCAP3-202ENST00000407293 GPR162Q16538 588 aa24.84■■□□□ 1.57
KRTCAP3-202ENST00000407293 COL24A1Q17RW2 1714 aa24.83■■□□□ 1.57
KRTCAP3-202ENST00000407293 CARD14Q9BXL6 1004 aa24.83■■□□□ 1.57
KRTCAP3-202ENST00000407293 CDCA8Q53HL2 280 aa24.82■■□□□ 1.56
KRTCAP3-202ENST00000407293 GOLGB1Q14789 3259 aaKnown RBP24.82■■□□□ 1.56
KRTCAP3-202ENST00000407293 CHD4Q14839 1912 aa24.82■■□□□ 1.56
KRTCAP3-202ENST00000407293 COL23A1Q86Y22 540 aaPredicted RBP24.81■■□□□ 1.56
KRTCAP3-202ENST00000407293 FLT4P35916 1363 aa24.8■■□□□ 1.56
KRTCAP3-202ENST00000407293 MSH5O43196 834 aa24.79■■□□□ 1.56
KRTCAP3-202ENST00000407293 NLGN2Q8NFZ4 835 aa24.79■■□□□ 1.56
KRTCAP3-202ENST00000407293 PCDH11XQ9BZA7 1347 aa24.79■■□□□ 1.56
KRTCAP3-202ENST00000407293 PCDH11YQ9BZA8 1340 aa24.79■■□□□ 1.56
KRTCAP3-202ENST00000407293 KIF24Q5T7B8 1368 aa24.79■■□□□ 1.56
KRTCAP3-202ENST00000407293 KIF20BQ96Q89 1820 aa24.78■■□□□ 1.56
KRTCAP3-202ENST00000407293 EMILIN1Q9Y6C2 1016 aa24.78■■□□□ 1.56
KRTCAP3-202ENST00000407293 CYP27B1O15528 508 aa24.77■■□□□ 1.56
KRTCAP3-202ENST00000407293 PELP1Q8IZL8 1130 aaKnown RBP24.77■■□□□ 1.56
KRTCAP3-202ENST00000407293 MPRIPQ6WCQ1 1025 aa24.76■■□□□ 1.55
KRTCAP3-202ENST00000407293 NSD3Q9BZ95 1437 aa24.75■■□□□ 1.55
KRTCAP3-202ENST00000407293 MSL1Q68DK7 614 aa24.74■■□□□ 1.55
KRTCAP3-202ENST00000407293 PALLDQ8WX93 1383 aa24.73■■□□□ 1.55
KRTCAP3-202ENST00000407293 PPM1GO15355 546 aaPredicted RBP24.72■■□□□ 1.55
KRTCAP3-202ENST00000407293 C5P01031 1676 aa24.7■■□□□ 1.54
KRTCAP3-202ENST00000407293 YBX3P16989 372 aaKnown RBP eCLIP24.68■■□□□ 1.54
KRTCAP3-202ENST00000407293 NKX1-1Q15270 411 aaPredicted RBP24.68■■□□□ 1.54
KRTCAP3-202ENST00000407293 PIGBQ92521 554 aa24.68■■□□□ 1.54
KRTCAP3-202ENST00000407293 TOGARAM1Q9Y4F4 1720 aa24.68■■□□□ 1.54
KRTCAP3-202ENST00000407293 NCAPD2Q15021 1401 aa24.68■■□□□ 1.54
KRTCAP3-202ENST00000407293 WASHC2AQ641Q2 1341 aa24.67■■□□□ 1.54
KRTCAP3-202ENST00000407293 C1QTNF8P60827 252 aa24.67■■□□□ 1.54
KRTCAP3-202ENST00000407293 AMIGO3Q86WK7 504 aa24.67■■□□□ 1.54
KRTCAP3-202ENST00000407293 FLAD1Q8NFF5 587 aa24.67■■□□□ 1.54
KRTCAP3-202ENST00000407293 SMARCC1Q92922 1105 aaPredicted RBP24.67■■□□□ 1.54
KRTCAP3-202ENST00000407293 EYA1Q99502 592 aa24.67■■□□□ 1.54
KRTCAP3-202ENST00000407293 ITGB4P16144 1822 aa24.66■■□□□ 1.54
KRTCAP3-202ENST00000407293 TAF1LQ8IZX4 1826 aa24.66■■□□□ 1.54
KRTCAP3-202ENST00000407293 HMGB2P26583 209 aaKnown RBP24.66■■□□□ 1.54
KRTCAP3-202ENST00000407293 SPG7Q9UQ90 795 aa24.66■■□□□ 1.54
KRTCAP3-202ENST00000407293 PKD1L3Q7Z443 1732 aa24.66■■□□□ 1.54
KRTCAP3-202ENST00000407293 TIMELESSQ9UNS1 1208 aa24.65■■□□□ 1.54
KRTCAP3-202ENST00000407293 GRIN3BO60391 1043 aa24.64■■□□□ 1.54
KRTCAP3-202ENST00000407293 SMIM5Q71RC9 77 aa24.64■■□□□ 1.54
KRTCAP3-202ENST00000407293 POLKQ9UBT6 870 aa24.64■■□□□ 1.54
KRTCAP3-202ENST00000407293 AK7Q96M32 723 aa24.63■■□□□ 1.53
KRTCAP3-202ENST00000407293 ANKRD26Q9UPS8 1709 aa24.63■■□□□ 1.53
KRTCAP3-202ENST00000407293 C4BP0C0L5 1744 aa24.62■■□□□ 1.53
KRTCAP3-202ENST00000407293 CD2APQ9Y5K6 639 aa24.62■■□□□ 1.53
KRTCAP3-202ENST00000407293 MAP2P11137 1827 aaKnown RBP24.62■■□□□ 1.53
KRTCAP3-202ENST00000407293 SENP3-EIF4A1A0A087X0R7 540 aa24.61■■□□□ 1.53
KRTCAP3-202ENST00000407293 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.61■■□□□ 1.53
KRTCAP3-202ENST00000407293 LOC102724428A0A0B4J2F2 783 aa24.6■■□□□ 1.53
KRTCAP3-202ENST00000407293 PHF14O94880 888 aa24.6■■□□□ 1.53
KRTCAP3-202ENST00000407293 SIK1P57059 783 aa24.6■■□□□ 1.53
KRTCAP3-202ENST00000407293 POLR3GLQ9BT43 218 aa24.6■■□□□ 1.53
KRTCAP3-202ENST00000407293 CLSPNQ9HAW4 1339 aa24.6■■□□□ 1.53
KRTCAP3-202ENST00000407293 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.59■■□□□ 1.53
KRTCAP3-202ENST00000407293 TNNT2P45379 298 aaPredicted RBP24.59■■□□□ 1.53
KRTCAP3-202ENST00000407293 LINC00116Q8NCU8 138 aa24.59■■□□□ 1.53
KRTCAP3-202ENST00000407293 ASAP1Q9ULH1 1129 aa24.59■■□□□ 1.53
KRTCAP3-202ENST00000407293 PHKG2P15735 406 aa24.58■■□□□ 1.53
KRTCAP3-202ENST00000407293 TMOD3Q9NYL9 352 aa24.58■■□□□ 1.53
KRTCAP3-202ENST00000407293 GIGYF1O75420 1035 aaPredicted RBP24.57■■□□□ 1.52
KRTCAP3-202ENST00000407293 EIF4A2Q14240 407 aaKnown RBP24.57■■□□□ 1.52
KRTCAP3-202ENST00000407293 IFNL2Q8IZJ0 200 aa24.57■■□□□ 1.52
KRTCAP3-202ENST00000407293 PCGF6Q9BYE7 350 aa24.57■■□□□ 1.52
KRTCAP3-202ENST00000407293 UBR3Q6ZT12 1888 aa24.55■■□□□ 1.52
KRTCAP3-202ENST00000407293 SSFA2P28290 1259 aa24.55■■□□□ 1.52
KRTCAP3-202ENST00000407293 ITPK1Q13572 414 aa24.55■■□□□ 1.52
KRTCAP3-202ENST00000407293 ATG3Q9NT62 314 aa24.54■■□□□ 1.52
KRTCAP3-202ENST00000407293 ATP6V1AP38606 617 aa24.53■■□□□ 1.52
KRTCAP3-202ENST00000407293 GNPATO15228 680 aa24.51■■□□□ 1.51
KRTCAP3-202ENST00000407293 PANK3Q9H999 370 aa24.5■■□□□ 1.51
KRTCAP3-202ENST00000407293 WWC3Q9ULE0 1092 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms