RNA–Protein interactions for RNA: ENST00000407004.7

ILF3-202, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 1 (best) BASIC

Gene ILF3, Length 3,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-202ENST00000407004 PARP4Q9UKK3 1724 aaKnown RBP15.31■□□□□ 0.04
ILF3-202ENST00000407004 COG3Q96JB2 828 aa15.3■□□□□ 0.04
ILF3-202ENST00000407004 FLT4P35916 1363 aa15.29■□□□□ 0.04
ILF3-202ENST00000407004 GOLGA6L3A6NEY3 463 aa15.29■□□□□ 0.04
ILF3-202ENST00000407004 PANK2Q9BZ23 570 aa15.29■□□□□ 0.04
ILF3-202ENST00000407004 TEX2Q8IWB9 1127 aa15.28■□□□□ 0.04
ILF3-202ENST00000407004 LRRC59Q96AG4 307 aaKnown RBP15.28■□□□□ 0.04
ILF3-202ENST00000407004 JCADQ9P266 1359 aa15.28■□□□□ 0.04
ILF3-202ENST00000407004 SPATA31A6Q5VVP1 1343 aa15.28■□□□□ 0.04
ILF3-202ENST00000407004 NCLP19338 710 aaKnown RBP15.28■□□□□ 0.04
ILF3-202ENST00000407004 SOX12O15370 315 aa15.27■□□□□ 0.04
ILF3-202ENST00000407004 NGEFQ8N5V2 710 aa15.27■□□□□ 0.03
ILF3-202ENST00000407004 XRCC6P12956 609 aaKnown RBP eCLIP15.27■□□□□ 0.03
ILF3-202ENST00000407004 AEBP1Q8IUX7 1158 aa15.27■□□□□ 0.03
ILF3-202ENST00000407004 MORC1Q86VD1 984 aa15.26■□□□□ 0.03
ILF3-202ENST00000407004 KDRP35968 1356 aa15.26■□□□□ 0.03
ILF3-202ENST00000407004 RGPD5Q99666 1765 aa15.26■□□□□ 0.03
ILF3-202ENST00000407004 IGSF3O75054 1194 aa15.25■□□□□ 0.03
ILF3-202ENST00000407004 NME9Q86XW9 330 aa15.25■□□□□ 0.03
ILF3-202ENST00000407004 LRRC37A3O60309 1634 aa15.25■□□□□ 0.03
ILF3-202ENST00000407004 PMFBP1Q8TBY8 1022 aa15.25■□□□□ 0.03
ILF3-202ENST00000407004 PDCL3Q9H2J4 239 aa15.25■□□□□ 0.03
ILF3-202ENST00000407004 SLIT2O94813 1529 aa15.25■□□□□ 0.03
ILF3-202ENST00000407004 ILDR1Q86SU0 546 aaPredicted RBP15.24■□□□□ 0.03
ILF3-202ENST00000407004 FAM161AQ3B820 660 aa15.24■□□□□ 0.03
ILF3-202ENST00000407004 ARHGEF25Q86VW2 580 aa15.24■□□□□ 0.03
ILF3-202ENST00000407004 CRBNQ96SW2 442 aa15.23■□□□□ 0.03
ILF3-202ENST00000407004 SENP3Q9H4L4 574 aaPredicted RBP15.23■□□□□ 0.03
ILF3-202ENST00000407004 POLKQ9UBT6 870 aa15.23■□□□□ 0.03
ILF3-202ENST00000407004 BCCIPQ9P287 314 aaKnown RBP eCLIP15.23■□□□□ 0.03
ILF3-202ENST00000407004 LRP6O75581 1613 aa15.23■□□□□ 0.03
ILF3-202ENST00000407004 TRIM44Q96DX7 344 aaPredicted RBP15.22■□□□□ 0.03
ILF3-202ENST00000407004 OVOS2A0A0G2JMS6 1433 aa15.22■□□□□ 0.03
ILF3-202ENST00000407004 CALD1Q05682 793 aaKnown RBP15.22■□□□□ 0.03
ILF3-202ENST00000407004 IP6K1Q92551 441 aa15.22■□□□□ 0.03
ILF3-202ENST00000407004 FBXO41Q8TF61 875 aa15.21■□□□□ 0.03
ILF3-202ENST00000407004 RBM33Q96EV2 1170 aaKnown RBP15.21■□□□□ 0.03
ILF3-202ENST00000407004 SHANK3Q9BYB0 1731 aa15.21■□□□□ 0.03
ILF3-202ENST00000407004 FOXO3O43524 673 aa15.21■□□□□ 0.03
ILF3-202ENST00000407004 PNISRQ8TF01 805 aaKnown RBP15.21■□□□□ 0.02
ILF3-202ENST00000407004 ABTB2Q8N961 1025 aa15.2■□□□□ 0.02
ILF3-202ENST00000407004 COL5A2P05997 1499 aaPredicted RBP15.2■□□□□ 0.02
ILF3-202ENST00000407004 ESPNB1AK53 854 aa15.2■□□□□ 0.02
ILF3-202ENST00000407004 MYH16Q9H6N6 1097 aa15.2■□□□□ 0.02
ILF3-202ENST00000407004 THSD7AQ9UPZ6 1657 aa15.2■□□□□ 0.02
ILF3-202ENST00000407004 HSP90B1P14625 803 aaKnown RBP15.19■□□□□ 0.02
ILF3-202ENST00000407004 ANP32BQ92688 251 aaKnown RBP15.19■□□□□ 0.02
ILF3-202ENST00000407004 CFAP53Q96M91 514 aa15.19■□□□□ 0.02
ILF3-202ENST00000407004 ZNF526Q8TF50 670 aaPredicted RBP15.19■□□□□ 0.02
ILF3-202ENST00000407004 GGNBP2Q9H3C7 697 aa15.19■□□□□ 0.02
ILF3-202ENST00000407004 CICQ96RK0 1608 aaPredicted RBP15.18■□□□□ 0.02
ILF3-202ENST00000407004 GCP02774 474 aa15.18■□□□□ 0.02
ILF3-202ENST00000407004 SPRYD3Q8NCJ5 442 aa15.18■□□□□ 0.02
ILF3-202ENST00000407004 IGSF1Q8N6C5 1336 aa15.18■□□□□ 0.02
ILF3-202ENST00000407004 RGPD2P0DJD1 1756 aa15.18■□□□□ 0.02
ILF3-202ENST00000407004 APPP05067 770 aa15.18■□□□□ 0.02
ILF3-202ENST00000407004 IL13P35225 146 aa15.18■□□□□ 0.02
ILF3-202ENST00000407004 FAM43BQ6ZT52 329 aaPredicted RBP15.18■□□□□ 0.02
ILF3-202ENST00000407004 MAP3K19Q56UN5 1328 aa15.18■□□□□ 0.02
ILF3-202ENST00000407004 NLRP6P59044 892 aa15.17■□□□□ 0.02
ILF3-202ENST00000407004 BECN1Q14457 450 aa15.17■□□□□ 0.02
ILF3-202ENST00000407004 UBAP1LF5GYI3 381 aa15.17■□□□□ 0.02
ILF3-202ENST00000407004 TPM2P07951 284 aa15.17■□□□□ 0.02
ILF3-202ENST00000407004 KCNA4P22459 653 aa15.17■□□□□ 0.02
ILF3-202ENST00000407004 SIPA1L3O60292 1781 aaPredicted RBP15.17■□□□□ 0.02
ILF3-202ENST00000407004 MYCNP04198 464 aaPredicted RBP15.16■□□□□ 0.02
ILF3-202ENST00000407004 CC2D1BQ5T0F9 858 aaKnown RBP15.16■□□□□ 0.02
ILF3-202ENST00000407004 DISP2A7MBM2 1401 aa15.16■□□□□ 0.02
ILF3-202ENST00000407004 HOXC9P31274 260 aa15.16■□□□□ 0.02
ILF3-202ENST00000407004 FAM13BQ9NYF5 915 aa15.16■□□□□ 0.02
ILF3-202ENST00000407004 C8orf34Q49A92 452 aa15.15■□□□□ 0.02
ILF3-202ENST00000407004 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.15■□□□□ 0.02
ILF3-202ENST00000407004 CHMP4CQ96CF2 233 aa15.15■□□□□ 0.02
ILF3-202ENST00000407004 KIAA1211Q6ZU35 1233 aa15.15■□□□□ 0.02
ILF3-202ENST00000407004 CDCA7LQ96GN5 454 aa15.15■□□□□ 0.02
ILF3-202ENST00000407004 VIRMAQ69YN4 1812 aaKnown RBP15.14■□□□□ 0.01
ILF3-202ENST00000407004 ZBTB22O15209 634 aa15.14■□□□□ 0.01
ILF3-202ENST00000407004 CCDC9Q9Y3X0 531 aaKnown RBP15.14■□□□□ 0.01
ILF3-202ENST00000407004 MTHFSP49914 203 aa15.14■□□□□ 0.01
ILF3-202ENST00000407004 ZNF831Q5JPB2 1677 aa15.13■□□□□ 0.01
ILF3-202ENST00000407004 TMEM51Q9NW97 253 aa15.13■□□□□ 0.01
ILF3-202ENST00000407004 MRC1P22897 1456 aa15.13■□□□□ 0.01
ILF3-202ENST00000407004 ZBTB9Q96C00 473 aa15.13■□□□□ 0.01
ILF3-202ENST00000407004 NUTM2FA1L443 756 aa15.13■□□□□ 0.01
ILF3-202ENST00000407004 CCDC27Q2M243 656 aa15.13■□□□□ 0.01
ILF3-202ENST00000407004 RNF216Q9NWF9 866 aaPredicted RBP15.13■□□□□ 0.01
ILF3-202ENST00000407004 DLG5Q8TDM6 1919 aa15.12■□□□□ 0.01
ILF3-202ENST00000407004 PAPPAQ13219 1627 aa15.12■□□□□ 0.01
ILF3-202ENST00000407004 PHF23Q9BUL5 403 aaPredicted RBP15.12■□□□□ 0.01
ILF3-202ENST00000407004 ZNF592Q92610 1267 aa15.12■□□□□ 0.01
ILF3-202ENST00000407004 ZRANB1Q9UGI0 708 aa15.12■□□□□ 0.01
ILF3-202ENST00000407004 BCL9O00512 1426 aa15.12■□□□□ 0.01
ILF3-202ENST00000407004 FCHSD2O94868 740 aa15.12■□□□□ 0.01
ILF3-202ENST00000407004 FAM193AP78312 1265 aa15.11■□□□□ 0.01
ILF3-202ENST00000407004 DIAPH1O60610 1272 aaKnown RBP15.11■□□□□ 0.01
ILF3-202ENST00000407004 CRB1P82279 1406 aa15.11■□□□□ 0.01
ILF3-202ENST00000407004 SCN11AQ9UI33 1791 aa15.1■□□□□ 0.01
ILF3-202ENST00000407004 DNTTIP2Q5QJE6 756 aaKnown RBP15.1■□□□□ 0.01
ILF3-202ENST00000407004 PLEKHF1Q96S99 279 aa15.1■□□□□ 0.01
ILF3-202ENST00000407004 ERBB3P21860 1342 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms