RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 FBLN1P23142 703 aa29.57■■■□□ 2.32
RHBDD3-202ENST00000406335 ANKRD36BQ8N2N9 1353 aa29.56■■■□□ 2.32
RHBDD3-202ENST00000406335 PAPPAQ13219 1627 aa29.56■■■□□ 2.32
RHBDD3-202ENST00000406335 KAT6BQ8WYB5 2073 aa29.54■■■□□ 2.32
RHBDD3-202ENST00000406335 SLC24A1O60721 1099 aa29.53■■■□□ 2.32
RHBDD3-202ENST00000406335 GIGYF1O75420 1035 aaPredicted RBP29.53■■■□□ 2.32
RHBDD3-202ENST00000406335 USP54Q70EL1 1684 aa29.53■■■□□ 2.32
RHBDD3-202ENST00000406335 ST20-MTHFSA0A0A6YYL1 179 aa29.52■■■□□ 2.32
RHBDD3-202ENST00000406335 UTRNP46939 3433 aa29.52■■■□□ 2.32
RHBDD3-202ENST00000406335 USP47Q96K76 1375 aa29.52■■■□□ 2.32
RHBDD3-202ENST00000406335 NLGN2Q8NFZ4 835 aa29.51■■■□□ 2.31
RHBDD3-202ENST00000406335 RAPGEF4Q8WZA2 1011 aa29.51■■■□□ 2.31
RHBDD3-202ENST00000406335 RRS1Q15050 365 aaKnown RBP29.49■■■□□ 2.31
RHBDD3-202ENST00000406335 GRIN3BO60391 1043 aa29.48■■■□□ 2.31
RHBDD3-202ENST00000406335 USHBP1Q8N6Y0 703 aa29.48■■■□□ 2.31
RHBDD3-202ENST00000406335 TATP17735 454 aaPredicted RBP29.47■■■□□ 2.31
RHBDD3-202ENST00000406335 NBPF6Q5VWK0 638 aa29.47■■■□□ 2.31
RHBDD3-202ENST00000406335 NBPF4Q96M43 638 aa29.47■■■□□ 2.31
RHBDD3-202ENST00000406335 MSL1Q68DK7 614 aa29.46■■■□□ 2.31
RHBDD3-202ENST00000406335 COL23A1Q86Y22 540 aaPredicted RBP29.46■■■□□ 2.31
RHBDD3-202ENST00000406335 HMGB2P26583 209 aaKnown RBP29.45■■■□□ 2.31
RHBDD3-202ENST00000406335 TESK2Q96S53 571 aa29.45■■■□□ 2.31
RHBDD3-202ENST00000406335 GGNBP2Q9H3C7 697 aa29.45■■■□□ 2.31
RHBDD3-202ENST00000406335 SMG6Q86US8 1419 aaKnown RBP29.45■■■□□ 2.3
RHBDD3-202ENST00000406335 CGNL1Q0VF96 1302 aa29.44■■■□□ 2.3
RHBDD3-202ENST00000406335 CLSPNQ9HAW4 1339 aa29.43■■■□□ 2.3
RHBDD3-202ENST00000406335 NSD2O96028 1365 aa29.42■■■□□ 2.3
RHBDD3-202ENST00000406335 MEGF6O75095 1541 aa29.41■■■□□ 2.3
RHBDD3-202ENST00000406335 CHD4Q14839 1912 aa29.41■■■□□ 2.3
RHBDD3-202ENST00000406335 TMF1P82094 1093 aa29.4■■■□□ 2.3
RHBDD3-202ENST00000406335 MPRIPQ6WCQ1 1025 aa29.4■■■□□ 2.3
RHBDD3-202ENST00000406335 FAM208AQ9UK61 1670 aaKnown RBP29.4■■■□□ 2.3
RHBDD3-202ENST00000406335 RTL1A6NKG5 1358 aa29.39■■■□□ 2.3
RHBDD3-202ENST00000406335 FYB1O15117 783 aa29.39■■■□□ 2.3
RHBDD3-202ENST00000406335 YBX3P16989 372 aaKnown RBP eCLIP29.38■■■□□ 2.29
RHBDD3-202ENST00000406335 FLAD1Q8NFF5 587 aa29.38■■■□□ 2.29
RHBDD3-202ENST00000406335 PCDH11XQ9BZA7 1347 aa29.37■■■□□ 2.29
RHBDD3-202ENST00000406335 PCDH11YQ9BZA8 1340 aa29.37■■■□□ 2.29
RHBDD3-202ENST00000406335 HSP90AB2PQ58FF8 381 aa29.36■■■□□ 2.29
RHBDD3-202ENST00000406335 DOT1LQ8TEK3 1739 aa29.35■■■□□ 2.29
RHBDD3-202ENST00000406335 AK7Q96M32 723 aa29.33■■■□□ 2.29
RHBDD3-202ENST00000406335 QSER1Q2KHR3 1735 aa29.32■■■□□ 2.28
RHBDD3-202ENST00000406335 PALLDQ8WX93 1383 aa29.32■■■□□ 2.28
RHBDD3-202ENST00000406335 TIMELESSQ9UNS1 1208 aa29.32■■■□□ 2.28
RHBDD3-202ENST00000406335 CD2APQ9Y5K6 639 aa29.32■■■□□ 2.28
RHBDD3-202ENST00000406335 CCER1Q8TC90 406 aaPredicted RBP29.31■■■□□ 2.28
RHBDD3-202ENST00000406335 SMARCC1Q92922 1105 aaPredicted RBP29.31■■■□□ 2.28
RHBDD3-202ENST00000406335 PPM1GO15355 546 aaPredicted RBP29.3■■■□□ 2.28
RHBDD3-202ENST00000406335 CDCA8Q53HL2 280 aa29.3■■■□□ 2.28
RHBDD3-202ENST00000406335 PHF14O94880 888 aa29.29■■■□□ 2.28
RHBDD3-202ENST00000406335 INSRP06213 1382 aa29.28■■■□□ 2.28
RHBDD3-202ENST00000406335 GPBP1L1Q9HC44 474 aaPredicted RBP29.27■■■□□ 2.28
RHBDD3-202ENST00000406335 LY75O60449 1722 aa29.27■■■□□ 2.28
RHBDD3-202ENST00000406335 FLT4P35916 1363 aa29.26■■■□□ 2.28
RHBDD3-202ENST00000406335 CYP27B1O15528 508 aa29.25■■■□□ 2.27
RHBDD3-202ENST00000406335 RGPD2P0DJD1 1756 aa29.24■■■□□ 2.27
RHBDD3-202ENST00000406335 ZNF526Q8TF50 670 aaPredicted RBP29.24■■■□□ 2.27
RHBDD3-202ENST00000406335 WWC3Q9ULE0 1092 aa29.24■■■□□ 2.27
RHBDD3-202ENST00000406335 SPG7Q9UQ90 795 aa29.24■■■□□ 2.27
RHBDD3-202ENST00000406335 TUBGCP6Q96RT7 1819 aa29.22■■■□□ 2.27
RHBDD3-202ENST00000406335 ATP10DQ9P241 1426 aa29.21■■■□□ 2.27
RHBDD3-202ENST00000406335 COL24A1Q17RW2 1714 aa29.21■■■□□ 2.27
RHBDD3-202ENST00000406335 PIGBQ92521 554 aa29.21■■■□□ 2.27
RHBDD3-202ENST00000406335 EMILIN1Q9Y6C2 1016 aa29.21■■■□□ 2.27
RHBDD3-202ENST00000406335 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.2■■■□□ 2.26
RHBDD3-202ENST00000406335 KIF24Q5T7B8 1368 aa29.2■■■□□ 2.26
RHBDD3-202ENST00000406335 SHANK3Q9BYB0 1731 aa29.2■■■□□ 2.26
RHBDD3-202ENST00000406335 SMIM5Q71RC9 77 aa29.19■■■□□ 2.26
RHBDD3-202ENST00000406335 TMOD3Q9NYL9 352 aa29.18■■■□□ 2.26
RHBDD3-202ENST00000406335 GOLGB1Q14789 3259 aaKnown RBP29.17■■■□□ 2.26
RHBDD3-202ENST00000406335 IGSF1Q8N6C5 1336 aa29.17■■■□□ 2.26
RHBDD3-202ENST00000406335 LOC102724428A0A0B4J2F2 783 aa29.16■■■□□ 2.26
RHBDD3-202ENST00000406335 SIK1P57059 783 aa29.16■■■□□ 2.26
RHBDD3-202ENST00000406335 NSD3Q9BZ95 1437 aa29.16■■■□□ 2.26
RHBDD3-202ENST00000406335 SSFA2P28290 1259 aa29.14■■■□□ 2.26
RHBDD3-202ENST00000406335 ATP6V1AP38606 617 aa29.14■■■□□ 2.26
RHBDD3-202ENST00000406335 AMIGO3Q86WK7 504 aa29.14■■■□□ 2.26
RHBDD3-202ENST00000406335 C5P01031 1676 aa29.13■■■□□ 2.25
RHBDD3-202ENST00000406335 CARD14Q9BXL6 1004 aa29.13■■■□□ 2.25
RHBDD3-202ENST00000406335 GNPATO15228 680 aa29.12■■■□□ 2.25
RHBDD3-202ENST00000406335 NKX1-1Q15270 411 aaPredicted RBP29.12■■■□□ 2.25
RHBDD3-202ENST00000406335 LINC00116Q8NCU8 138 aa29.12■■■□□ 2.25
RHBDD3-202ENST00000406335 IFFO2Q5TF58 517 aa29.11■■■□□ 2.25
RHBDD3-202ENST00000406335 IFNL2Q8IZJ0 200 aa29.1■■■□□ 2.25
RHBDD3-202ENST00000406335 POLR3GLQ9BT43 218 aa29.1■■■□□ 2.25
RHBDD3-202ENST00000406335 EYA1Q99502 592 aa29.09■■■□□ 2.25
RHBDD3-202ENST00000406335 ASAP1Q9ULH1 1129 aa29.09■■■□□ 2.25
RHBDD3-202ENST00000406335 C4BP0C0L5 1744 aa29.08■■■□□ 2.25
RHBDD3-202ENST00000406335 WASHC2AQ641Q2 1341 aa29.07■■■□□ 2.24
RHBDD3-202ENST00000406335 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.07■■■□□ 2.24
RHBDD3-202ENST00000406335 HSPA6P17066 643 aa29.06■■■□□ 2.24
RHBDD3-202ENST00000406335 PHKG2P15735 406 aa29.05■■■□□ 2.24
RHBDD3-202ENST00000406335 TNNT2P45379 298 aaPredicted RBP29.05■■■□□ 2.24
RHBDD3-202ENST00000406335 ITPK1Q13572 414 aa29.05■■■□□ 2.24
RHBDD3-202ENST00000406335 KIF20BQ96Q89 1820 aa29.05■■■□□ 2.24
RHBDD3-202ENST00000406335 MMP10P09238 476 aa29.04■■■□□ 2.24
RHBDD3-202ENST00000406335 TRAPPC3LQ5T215 181 aa29.04■■■□□ 2.24
RHBDD3-202ENST00000406335 RBM42Q9BTD8 480 aaKnown RBP29.03■■■□□ 2.24
RHBDD3-202ENST00000406335 RTCBQ9Y3I0 505 aaKnown RBP29.03■■■□□ 2.24
RHBDD3-202ENST00000406335 ATG3Q9NT62 314 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms