RNA–Protein interactions for RNA: ENST00000405727.6

ARFIP1-203, Transcript of ADP ribosylation factor interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene ARFIP1, Length 1,601 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFIP1-203ENST00000405727 RTF1Q92541 710 aaKnown RBP18.28■□□□□ 0.52
ARFIP1-203ENST00000405727 LRRC37A3O60309 1634 aa18.28■□□□□ 0.52
ARFIP1-203ENST00000405727 BCAR3O75815 825 aa18.27■□□□□ 0.52
ARFIP1-203ENST00000405727 CRB1P82279 1406 aa18.27■□□□□ 0.52
ARFIP1-203ENST00000405727 CFAP44Q96MT7 982 aa18.27■□□□□ 0.52
ARFIP1-203ENST00000405727 GNAT3A8MTJ3 354 aa18.27■□□□□ 0.51
ARFIP1-203ENST00000405727 UBAP1LF5GYI3 381 aa18.27■□□□□ 0.51
ARFIP1-203ENST00000405727 HTATSF1O43719 755 aaKnown RBP18.27■□□□□ 0.51
ARFIP1-203ENST00000405727 CT47B1P0C2W7 299 aaPredicted RBP18.27■□□□□ 0.51
ARFIP1-203ENST00000405727 RARSP54136 660 aaKnown RBP18.27■□□□□ 0.51
ARFIP1-203ENST00000405727 MBIPQ9NS73 344 aa18.27■□□□□ 0.51
ARFIP1-203ENST00000405727 COL5A2P05997 1499 aaPredicted RBP18.25■□□□□ 0.51
ARFIP1-203ENST00000405727 PLEKHO1Q53GL0 409 aaPredicted RBP18.25■□□□□ 0.51
ARFIP1-203ENST00000405727 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.25■□□□□ 0.51
ARFIP1-203ENST00000405727 AMOTQ4VCS5 1084 aa18.24■□□□□ 0.51
ARFIP1-203ENST00000405727 ZNF530Q6P9A1 599 aaPredicted RBP18.23■□□□□ 0.51
ARFIP1-203ENST00000405727 PPP4R2Q9NY27 417 aa18.23■□□□□ 0.51
ARFIP1-203ENST00000405727 WDR17Q8IZU2 1322 aa18.23■□□□□ 0.51
ARFIP1-203ENST00000405727 MEGF6O75095 1541 aa18.22■□□□□ 0.51
ARFIP1-203ENST00000405727 CHL1O00533 1208 aa18.22■□□□□ 0.51
ARFIP1-203ENST00000405727 C20orf194Q5TEA3 1177 aa18.22■□□□□ 0.51
ARFIP1-203ENST00000405727 RAPGEF4Q8WZA2 1011 aa18.22■□□□□ 0.51
ARFIP1-203ENST00000405727 COL14A1Q05707 1796 aaKnown RBP18.22■□□□□ 0.51
ARFIP1-203ENST00000405727 IL17REQ8NFR9 667 aa18.21■□□□□ 0.51
ARFIP1-203ENST00000405727 BCL2L13Q9BXK5 485 aa18.21■□□□□ 0.51
ARFIP1-203ENST00000405727 TATP17735 454 aaPredicted RBP18.2■□□□□ 0.5
ARFIP1-203ENST00000405727 AKAP4Q5JQC9 854 aa18.2■□□□□ 0.5
ARFIP1-203ENST00000405727 EXOC6Q8TAG9 804 aa18.2■□□□□ 0.5
ARFIP1-203ENST00000405727 VIRMAQ69YN4 1812 aaKnown RBP18.19■□□□□ 0.5
ARFIP1-203ENST00000405727 C1orf141Q5JVX7 400 aa18.19■□□□□ 0.5
ARFIP1-203ENST00000405727 TOM1L2Q6ZVM7 507 aa18.19■□□□□ 0.5
ARFIP1-203ENST00000405727 TSPYL6Q8N831 410 aa18.19■□□□□ 0.5
ARFIP1-203ENST00000405727 CERKQ8TCT0 537 aa18.19■□□□□ 0.5
ARFIP1-203ENST00000405727 CRBNQ96SW2 442 aa18.19■□□□□ 0.5
ARFIP1-203ENST00000405727 PKD1L3Q7Z443 1732 aa18.19■□□□□ 0.5
ARFIP1-203ENST00000405727 CEMIPQ8WUJ3 1361 aa18.18■□□□□ 0.5
ARFIP1-203ENST00000405727 PLEKHG2Q9H7P9 1386 aa18.18■□□□□ 0.5
ARFIP1-203ENST00000405727 CANXP27824 592 aaKnown RBP18.18■□□□□ 0.5
ARFIP1-203ENST00000405727 C8orf58Q8NAV2 365 aa18.18■□□□□ 0.5
ARFIP1-203ENST00000405727 SSH1Q8WYL5 1049 aa18.18■□□□□ 0.5
ARFIP1-203ENST00000405727 STRN4Q9NRL3 753 aa18.18■□□□□ 0.5
ARFIP1-203ENST00000405727 SMC4Q9NTJ3 1288 aa18.18■□□□□ 0.5
ARFIP1-203ENST00000405727 MIS18AQ9NYP9 233 aa18.18■□□□□ 0.5
ARFIP1-203ENST00000405727 PARP4Q9UKK3 1724 aaKnown RBP18.18■□□□□ 0.5
ARFIP1-203ENST00000405727 VAMP4O75379 141 aa18.17■□□□□ 0.5
ARFIP1-203ENST00000405727 EVA1CP58658 441 aa18.17■□□□□ 0.5
ARFIP1-203ENST00000405727 FRAT1Q92837 279 aaPredicted RBP18.17■□□□□ 0.5
ARFIP1-203ENST00000405727 TSPYL4Q9UJ04 414 aa18.17■□□□□ 0.5
ARFIP1-203ENST00000405727 TWISTNBQ3B726 338 aaPredicted RBP18.16■□□□□ 0.5
ARFIP1-203ENST00000405727 LARP1Q6PKG0 1096 aaKnown RBP18.16■□□□□ 0.5
ARFIP1-203ENST00000405727 CARD10Q9BWT7 1032 aa18.16■□□□□ 0.5
ARFIP1-203ENST00000405727 ELL2O00472 640 aaPredicted RBP18.16■□□□□ 0.5
ARFIP1-203ENST00000405727 ZNF428Q96B54 188 aa18.16■□□□□ 0.5
ARFIP1-203ENST00000405727 LGR6Q9HBX8 967 aa18.16■□□□□ 0.5
ARFIP1-203ENST00000405727 BTG4Q9NY30 223 aa18.16■□□□□ 0.5
ARFIP1-203ENST00000405727 SPG7Q9UQ90 795 aa18.16■□□□□ 0.5
ARFIP1-203ENST00000405727 OVOS2A0A0G2JMS6 1433 aa18.15■□□□□ 0.5
ARFIP1-203ENST00000405727 ADAMTS7Q9UKP4 1686 aa18.15■□□□□ 0.5
ARFIP1-203ENST00000405727 ALDH1L2Q3SY69 923 aa18.15■□□□□ 0.5
ARFIP1-203ENST00000405727 MPRIPQ6WCQ1 1025 aa18.15■□□□□ 0.5
ARFIP1-203ENST00000405727 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.15■□□□□ 0.51e-6■■■□□ 16.8
ARFIP1-203ENST00000405727 PLCH1Q4KWH8 1693 aa18.14■□□□□ 0.5
ARFIP1-203ENST00000405727 TAF7Q15545 349 aaPredicted RBP18.14■□□□□ 0.49
ARFIP1-203ENST00000405727 KRT24Q2M2I5 525 aa18.14■□□□□ 0.49
ARFIP1-203ENST00000405727 RNMTO43148 476 aaKnown RBP18.13■□□□□ 0.49
ARFIP1-203ENST00000405727 PDE3AQ14432 1141 aa18.13■□□□□ 0.49
ARFIP1-203ENST00000405727 B4GALNT3Q6L9W6 998 aa18.13■□□□□ 0.49
ARFIP1-203ENST00000405727 BABAM1Q9NWV8 329 aa18.13■□□□□ 0.49
ARFIP1-203ENST00000405727 ADAMTS2O95450 1211 aa18.12■□□□□ 0.49
ARFIP1-203ENST00000405727 KDM3BQ7LBC6 1761 aa18.12■□□□□ 0.49
ARFIP1-203ENST00000405727 PHKG2P15735 406 aa18.12■□□□□ 0.49
ARFIP1-203ENST00000405727 SIPA1L3O60292 1781 aaPredicted RBP18.11■□□□□ 0.49
ARFIP1-203ENST00000405727 SCN11AQ9UI33 1791 aa18.11■□□□□ 0.49
ARFIP1-203ENST00000405727 NUTM2BA6NNL0 878 aaPredicted RBP18.11■□□□□ 0.49
ARFIP1-203ENST00000405727 NUTM2EB1AL46 878 aaPredicted RBP18.11■□□□□ 0.49
ARFIP1-203ENST00000405727 TEFQ10587 303 aa18.11■□□□□ 0.49
ARFIP1-203ENST00000405727 ZKSCAN2Q63HK3 967 aa18.11■□□□□ 0.49
ARFIP1-203ENST00000405727 NUTM2AQ8IVF1 878 aaPredicted RBP18.11■□□□□ 0.49
ARFIP1-203ENST00000405727 PANK1Q8TE04 598 aa18.11■□□□□ 0.49
ARFIP1-203ENST00000405727 TNNQ9UQP3 1299 aa18.11■□□□□ 0.49
ARFIP1-203ENST00000405727 MRPL50Q8N5N7 158 aaKnown RBP18.1■□□□□ 0.49
ARFIP1-203ENST00000405727 NRAPQ86VF7 1730 aa18.1■□□□□ 0.49
ARFIP1-203ENST00000405727 KDM6AO15550 1401 aaPredicted RBP18.1■□□□□ 0.49
ARFIP1-203ENST00000405727 KIF16BQ96L93 1317 aa18.1■□□□□ 0.49
ARFIP1-203ENST00000405727 TCERG1O14776 1098 aaKnown RBP18.09■□□□□ 0.49
ARFIP1-203ENST00000405727 IL2RBP14784 551 aa18.09■□□□□ 0.49
ARFIP1-203ENST00000405727 BRPF1P55201 1214 aaPredicted RBP18.09■□□□□ 0.49
ARFIP1-203ENST00000405727 IFNL2Q8IZJ0 200 aa18.09■□□□□ 0.49
ARFIP1-203ENST00000405727 NOB1Q9ULX3 412 aaKnown RBP18.09■□□□□ 0.49
ARFIP1-203ENST00000405727 JCADQ9P266 1359 aa18.09■□□□□ 0.49
ARFIP1-203ENST00000405727 CYP27B1O15528 508 aa18.09■□□□□ 0.49
ARFIP1-203ENST00000405727 CCDC136Q96JN2 1154 aa18.09■□□□□ 0.49
ARFIP1-203ENST00000405727 SHANK3Q9BYB0 1731 aa18.08■□□□□ 0.49
ARFIP1-203ENST00000405727 RLBP1P12271 317 aa18.08■□□□□ 0.48
ARFIP1-203ENST00000405727 ZCRB1Q8TBF4 217 aaKnown RBP18.08■□□□□ 0.48
ARFIP1-203ENST00000405727 ATF7IPQ6VMQ6 1270 aa18.07■□□□□ 0.48
ARFIP1-203ENST00000405727 USP35Q9P2H5 1018 aa18.07■□□□□ 0.48
ARFIP1-203ENST00000405727 BTBD11A6QL63 1104 aa18.06■□□□□ 0.48
ARFIP1-203ENST00000405727 IPO8O15397 1037 aaKnown RBP18.06■□□□□ 0.48
ARFIP1-203ENST00000405727 TRIM27P14373 513 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 1839.5 ms