RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 TTC21BQ7Z4L5 1316 aa14.45□□□□□ -0.1
RPAIN-204ENST00000405578 MSH5O43196 834 aa14.45□□□□□ -0.1
RPAIN-204ENST00000405578 EDC4Q6P2E9 1401 aaKnown RBP14.45□□□□□ -0.1
RPAIN-204ENST00000405578 ARHGEF25Q86VW2 580 aa14.45□□□□□ -0.1
RPAIN-204ENST00000405578 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.45□□□□□ -0.1
RPAIN-204ENST00000405578 PANK3Q9H999 370 aa14.45□□□□□ -0.1
RPAIN-204ENST00000405578 LRRC4BQ9NT99 713 aa14.45□□□□□ -0.1
RPAIN-204ENST00000405578 ZNF316A6NFI3 1004 aaPredicted RBP14.44□□□□□ -0.1
RPAIN-204ENST00000405578 YBX3P16989 372 aaKnown RBP eCLIP14.44□□□□□ -0.1
RPAIN-204ENST00000405578 SLC16A10Q8TF71 515 aa14.44□□□□□ -0.1
RPAIN-204ENST00000405578 KNSTRNQ9Y448 316 aa14.44□□□□□ -0.1
RPAIN-204ENST00000405578 LY75O60449 1722 aa14.44□□□□□ -0.1
RPAIN-204ENST00000405578 AKT1S1Q96B36 256 aa14.43□□□□□ -0.1
RPAIN-204ENST00000405578 DOT1LQ8TEK3 1739 aa14.43□□□□□ -0.1
RPAIN-204ENST00000405578 CGNL1Q0VF96 1302 aa14.42□□□□□ -0.1
RPAIN-204ENST00000405578 PNPLA7Q6ZV29 1317 aa14.42□□□□□ -0.1
RPAIN-204ENST00000405578 GRIN3BO60391 1043 aa14.42□□□□□ -0.1
RPAIN-204ENST00000405578 HSPA6P17066 643 aa14.42□□□□□ -0.1
RPAIN-204ENST00000405578 KCNH5Q8NCM2 988 aa14.42□□□□□ -0.1
RPAIN-204ENST00000405578 CD163L1Q9NR16 1453 aa14.42□□□□□ -0.1
RPAIN-204ENST00000405578 NSD3Q9BZ95 1437 aa14.41□□□□□ -0.1
RPAIN-204ENST00000405578 COG3Q96JB2 828 aa14.4□□□□□ -0.1
RPAIN-204ENST00000405578 GPBP1L1Q9HC44 474 aaPredicted RBP14.4□□□□□ -0.1
RPAIN-204ENST00000405578 MON2Q7Z3U7 1717 aa14.4□□□□□ -0.1
RPAIN-204ENST00000405578 ZNF526Q8TF50 670 aaPredicted RBP14.39□□□□□ -0.11
RPAIN-204ENST00000405578 CARD14Q9BXL6 1004 aa14.39□□□□□ -0.11
RPAIN-204ENST00000405578 USP54Q70EL1 1684 aa14.39□□□□□ -0.11
RPAIN-204ENST00000405578 NME9Q86XW9 330 aa14.38□□□□□ -0.11
RPAIN-204ENST00000405578 TFCP2L1Q9NZI6 479 aa14.38□□□□□ -0.11
RPAIN-204ENST00000405578 ADCY9O60503 1353 aa14.37□□□□□ -0.11
RPAIN-204ENST00000405578 IL2RBP14784 551 aa14.37□□□□□ -0.11
RPAIN-204ENST00000405578 KCNQ4P56696 695 aa14.37□□□□□ -0.11
RPAIN-204ENST00000405578 SLC27A3Q5K4L6 730 aa14.37□□□□□ -0.11
RPAIN-204ENST00000405578 NLRP2Q9NX02 1062 aa14.37□□□□□ -0.11
RPAIN-204ENST00000405578 ERBB3P21860 1342 aa14.37□□□□□ -0.11
RPAIN-204ENST00000405578 USP31Q70CQ4 1352 aa14.36□□□□□ -0.11
RPAIN-204ENST00000405578 FYB1O15117 783 aa14.36□□□□□ -0.11
RPAIN-204ENST00000405578 DDX10Q13206 875 aaKnown RBP14.36□□□□□ -0.11
RPAIN-204ENST00000405578 FAM208AQ9UK61 1670 aaKnown RBP14.36□□□□□ -0.11
RPAIN-204ENST00000405578 NSD2O96028 1365 aa14.35□□□□□ -0.11
RPAIN-204ENST00000405578 GGNBP2Q9H3C7 697 aa14.35□□□□□ -0.11
RPAIN-204ENST00000405578 C5P01031 1676 aa14.34□□□□□ -0.11
RPAIN-204ENST00000405578 PER1O15534 1290 aaPredicted RBP14.33□□□□□ -0.12
RPAIN-204ENST00000405578 MSL1Q68DK7 614 aa14.33□□□□□ -0.12
RPAIN-204ENST00000405578 TAF1LQ8IZX4 1826 aa14.33□□□□□ -0.12
RPAIN-204ENST00000405578 RGPD2P0DJD1 1756 aa14.32□□□□□ -0.12
RPAIN-204ENST00000405578 MORC1Q86VD1 984 aa14.32□□□□□ -0.12
RPAIN-204ENST00000405578 AMER1Q5JTC6 1135 aaPredicted RBP14.31□□□□□ -0.12
RPAIN-204ENST00000405578 COL23A1Q86Y22 540 aaPredicted RBP14.31□□□□□ -0.12
RPAIN-204ENST00000405578 DDX54Q8TDD1 881 aaKnown RBP14.31□□□□□ -0.12
RPAIN-204ENST00000405578 SYTL4Q96C24 671 aaPredicted RBP14.31□□□□□ -0.12
RPAIN-204ENST00000405578 CC2D1BQ5T0F9 858 aaKnown RBP14.3□□□□□ -0.12
RPAIN-204ENST00000405578 ANKRD24Q8TF21 1146 aa14.3□□□□□ -0.12
RPAIN-204ENST00000405578 NPC1L1Q9UHC9 1359 aa14.3□□□□□ -0.12
RPAIN-204ENST00000405578 WDR90Q96KV7 1748 aa14.29□□□□□ -0.12
RPAIN-204ENST00000405578 CCNL1Q9UK58 526 aaPredicted RBP14.29□□□□□ -0.12
RPAIN-204ENST00000405578 KIF3CO14782 793 aa14.28□□□□□ -0.12
RPAIN-204ENST00000405578 PRIM1P49642 420 aaKnown RBP14.28□□□□□ -0.12
RPAIN-204ENST00000405578 CNGB1Q14028 1251 aaPredicted RBP14.28□□□□□ -0.12
RPAIN-204ENST00000405578 CD2APQ9Y5K6 639 aa14.28□□□□□ -0.12
RPAIN-204ENST00000405578 WWC3Q9ULE0 1092 aa14.27□□□□□ -0.13
RPAIN-204ENST00000405578 TOGARAM1Q9Y4F4 1720 aa14.27□□□□□ -0.13
RPAIN-204ENST00000405578 TNNT2P45379 298 aaPredicted RBP14.26□□□□□ -0.13
RPAIN-204ENST00000405578 AMPHP49418 695 aa14.26□□□□□ -0.13
RPAIN-204ENST00000405578 APLP1P51693 650 aa14.26□□□□□ -0.13
RPAIN-204ENST00000405578 CICQ96RK0 1608 aaPredicted RBP14.26□□□□□ -0.13
RPAIN-204ENST00000405578 UBR3Q6ZT12 1888 aa14.25□□□□□ -0.13
RPAIN-204ENST00000405578 IGSF1Q8N6C5 1336 aa14.24□□□□□ -0.13
RPAIN-204ENST00000405578 C4BP0C0L5 1744 aa14.24□□□□□ -0.13
RPAIN-204ENST00000405578 PPM1GO15355 546 aaPredicted RBP14.23□□□□□ -0.13
RPAIN-204ENST00000405578 CAPN15O75808 1086 aa14.23□□□□□ -0.13
RPAIN-204ENST00000405578 RRS1Q15050 365 aaKnown RBP14.23□□□□□ -0.13
RPAIN-204ENST00000405578 DNAJC5GQ8N7S2 189 aa14.23□□□□□ -0.13
RPAIN-204ENST00000405578 LTV1Q96GA3 475 aaPredicted RBP14.23□□□□□ -0.13
RPAIN-204ENST00000405578 KIF24Q5T7B8 1368 aa14.22□□□□□ -0.13
RPAIN-204ENST00000405578 MAP3K19Q56UN5 1328 aa14.22□□□□□ -0.13
RPAIN-204ENST00000405578 MEGF6O75095 1541 aa14.22□□□□□ -0.13
RPAIN-204ENST00000405578 RALBP1Q15311 655 aa14.22□□□□□ -0.13
RPAIN-204ENST00000405578 IP6K1Q92551 441 aa14.22□□□□□ -0.13
RPAIN-204ENST00000405578 ITGB4P16144 1822 aa14.21□□□□□ -0.13
RPAIN-204ENST00000405578 N4BP2Q86UW6 1770 aaPredicted RBP14.21□□□□□ -0.13
RPAIN-204ENST00000405578 KIAA1551Q9HCM1 1747 aa14.21□□□□□ -0.14
RPAIN-204ENST00000405578 RTL1A6NKG5 1358 aa14.21□□□□□ -0.14
RPAIN-204ENST00000405578 FBLN1P23142 703 aa14.2□□□□□ -0.14
RPAIN-204ENST00000405578 POLKQ9UBT6 870 aa14.2□□□□□ -0.14
RPAIN-204ENST00000405578 FLT4P35916 1363 aa14.2□□□□□ -0.14
RPAIN-204ENST00000405578 ANP32CO43423 234 aa14.19□□□□□ -0.14
RPAIN-204ENST00000405578 HOXC9P31274 260 aa14.19□□□□□ -0.14
RPAIN-204ENST00000405578 COL13A1Q5TAT6 717 aaPredicted RBP14.19□□□□□ -0.14
RPAIN-204ENST00000405578 ZCRB1Q8TBF4 217 aaKnown RBP14.19□□□□□ -0.14
RPAIN-204ENST00000405578 EMILIN1Q9Y6C2 1016 aa14.19□□□□□ -0.14
RPAIN-204ENST00000405578 KIF13BQ9NQT8 1826 aa14.19□□□□□ -0.14
RPAIN-204ENST00000405578 KIF20BQ96Q89 1820 aa14.18□□□□□ -0.14
RPAIN-204ENST00000405578 SMG6Q86US8 1419 aaKnown RBP14.18□□□□□ -0.14
RPAIN-204ENST00000405578 TOMM70O94826 608 aa14.18□□□□□ -0.14
RPAIN-204ENST00000405578 FLAD1Q8NFF5 587 aa14.18□□□□□ -0.14
RPAIN-204ENST00000405578 CFAP53Q96M91 514 aa14.18□□□□□ -0.14
RPAIN-204ENST00000405578 BRCA1P38398 1863 aaKnown RBP14.16□□□□□ -0.14
RPAIN-204ENST00000405578 PKD1L3Q7Z443 1732 aa14.16□□□□□ -0.14
RPAIN-204ENST00000405578 PPP2R1AP30153 589 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms