RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 RBM33Q96EV2 1170 aaKnown RBP18.53■□□□□ 0.56
ATG4B-206ENST00000405546 PREX1Q8TCU6 1659 aa18.52■□□□□ 0.56
ATG4B-206ENST00000405546 LTKP29376 864 aa18.52■□□□□ 0.56
ATG4B-206ENST00000405546 JARID2Q92833 1246 aaPredicted RBP18.52■□□□□ 0.56
ATG4B-206ENST00000405546 GBP4Q96PP9 640 aa18.52■□□□□ 0.56
ATG4B-206ENST00000405546 NLRP6P59044 892 aa18.52■□□□□ 0.56
ATG4B-206ENST00000405546 BMP2KLQ5H9B9 411 aa18.52■□□□□ 0.56
ATG4B-206ENST00000405546 TPM2P07951 284 aa18.51■□□□□ 0.55
ATG4B-206ENST00000405546 CAVIN1Q6NZI2 390 aaKnown RBP18.51■□□□□ 0.55
ATG4B-206ENST00000405546 AMOTL2Q9Y2J4 779 aa18.51■□□□□ 0.55
ATG4B-206ENST00000405546 USP32Q8NFA0 1604 aa18.51■□□□□ 0.55
ATG4B-206ENST00000405546 OTUD7AQ8TE49 926 aaPredicted RBP18.5■□□□□ 0.55
ATG4B-206ENST00000405546 ZNF853P0CG23 659 aa18.5■□□□□ 0.55
ATG4B-206ENST00000405546 MEIS3Q99687 375 aa18.5■□□□□ 0.55
ATG4B-206ENST00000405546 MCTP1Q6DN14 999 aa18.5■□□□□ 0.55
ATG4B-206ENST00000405546 HAP1P54257 671 aaPredicted RBP18.49■□□□□ 0.55
ATG4B-206ENST00000405546 RICTORQ6R327 1708 aa18.49■□□□□ 0.55
ATG4B-206ENST00000405546 TNRQ92752 1358 aa18.48■□□□□ 0.55
ATG4B-206ENST00000405546 CDC45O75419 566 aa18.48■□□□□ 0.55
ATG4B-206ENST00000405546 TSC1Q92574 1164 aa18.48■□□□□ 0.55
ATG4B-206ENST00000405546 RBM27Q9P2N5 1060 aaKnown RBP18.48■□□□□ 0.55
ATG4B-206ENST00000405546 ROBO2Q9HCK4 1378 aa18.48■□□□□ 0.55
ATG4B-206ENST00000405546 ADGRB2O60241 1585 aa18.48■□□□□ 0.55
ATG4B-206ENST00000405546 ZSCAN30Q86W11 494 aa18.48■□□□□ 0.55
ATG4B-206ENST00000405546 RNF214Q8ND24 703 aa18.48■□□□□ 0.55
ATG4B-206ENST00000405546 STK31Q9BXU1 1019 aa18.48■□□□□ 0.55
ATG4B-206ENST00000405546 FOXD4L6Q3SYB3 417 aaPredicted RBP18.47■□□□□ 0.55
ATG4B-206ENST00000405546 FOXD4L3Q6VB84 417 aaPredicted RBP18.47■□□□□ 0.55
ATG4B-206ENST00000405546 LMOD2Q6P5Q4 547 aa18.47■□□□□ 0.55
ATG4B-206ENST00000405546 GAS2L2Q8NHY3 880 aa18.47■□□□□ 0.55
ATG4B-206ENST00000405546 MED14O60244 1454 aa18.47■□□□□ 0.55
ATG4B-206ENST00000405546 FKBP5Q13451 457 aaPredicted RBP18.47■□□□□ 0.55
ATG4B-206ENST00000405546 ATP7BP35670 1465 aa18.46■□□□□ 0.55
ATG4B-206ENST00000405546 UQCRHLA0A096LP55 91 aa18.46■□□□□ 0.55
ATG4B-206ENST00000405546 UQCRHP07919 91 aa18.46■□□□□ 0.55
ATG4B-206ENST00000405546 MTHFSDQ2M296 383 aaKnown RBP18.46■□□□□ 0.55
ATG4B-206ENST00000405546 G2E3Q7L622 706 aa18.46■□□□□ 0.55
ATG4B-206ENST00000405546 ABCC4O15439 1325 aa18.45■□□□□ 0.54
ATG4B-206ENST00000405546 FAM177BA6PVY3 158 aa18.45■□□□□ 0.54
ATG4B-206ENST00000405546 TSHZ3Q63HK5 1081 aa18.45■□□□□ 0.54
ATG4B-206ENST00000405546 CASC1Q6TDU7 716 aa18.45■□□□□ 0.54
ATG4B-206ENST00000405546 PLEKHM2Q8IWE5 1019 aa18.45■□□□□ 0.54
ATG4B-206ENST00000405546 EXOC6BQ9Y2D4 811 aa18.45■□□□□ 0.54
ATG4B-206ENST00000405546 MAP3K19Q56UN5 1328 aa18.44■□□□□ 0.54
ATG4B-206ENST00000405546 PKP1Q13835 747 aa18.44■□□□□ 0.54
ATG4B-206ENST00000405546 USHBP1Q8N6Y0 703 aa18.44■□□□□ 0.54
ATG4B-206ENST00000405546 CPS1P31327 1500 aa18.44■□□□□ 0.54
ATG4B-206ENST00000405546 MAP2P11137 1827 aaKnown RBP18.44■□□□□ 0.54
ATG4B-206ENST00000405546 NOL8Q76FK4 1167 aaKnown RBP18.44■□□□□ 0.54
ATG4B-206ENST00000405546 CHL1O00533 1208 aa18.43■□□□□ 0.54
ATG4B-206ENST00000405546 ABTB2Q8N961 1025 aa18.43■□□□□ 0.54
ATG4B-206ENST00000405546 CPSF1Q10570 1443 aaKnown RBP18.43■□□□□ 0.54
ATG4B-206ENST00000405546 CLTCQ00610 1675 aaKnown RBP18.43■□□□□ 0.54
ATG4B-206ENST00000405546 EIF2S2P20042 333 aaKnown RBP18.43■□□□□ 0.54
ATG4B-206ENST00000405546 RBM25P49756 843 aaKnown RBP18.43■□□□□ 0.54
ATG4B-206ENST00000405546 CCDC173Q0VFZ6 552 aa18.43■□□□□ 0.54
ATG4B-206ENST00000405546 GSPT1P15170 499 aaKnown RBP18.43■□□□□ 0.54
ATG4B-206ENST00000405546 BRPF1P55201 1214 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-206ENST00000405546 RAB3GAP1Q15042 981 aa18.42■□□□□ 0.54
ATG4B-206ENST00000405546 DCTPP1Q9H773 170 aa18.42■□□□□ 0.54
ATG4B-206ENST00000405546 TRIM6-TRIM34B2RNG4 842 aa18.42■□□□□ 0.54
ATG4B-206ENST00000405546 GOLGA6L22H0YM25 854 aa18.41■□□□□ 0.54
ATG4B-206ENST00000405546 HMMRO75330 724 aa18.41■□□□□ 0.54
ATG4B-206ENST00000405546 OFD1O75665 1012 aa18.41■□□□□ 0.54
ATG4B-206ENST00000405546 TMEM2Q9UHN6 1383 aa18.41■□□□□ 0.54
ATG4B-206ENST00000405546 K7ELQ4 463 aaPredicted RBP18.41■□□□□ 0.54
ATG4B-206ENST00000405546 CEP85Q6P2H3 762 aa18.41■□□□□ 0.54
ATG4B-206ENST00000405546 RILPL2Q969X0 211 aa18.41■□□□□ 0.54
ATG4B-206ENST00000405546 EYA1Q99502 592 aa18.41■□□□□ 0.54
ATG4B-206ENST00000405546 AATKQ6ZMQ8 1374 aa18.4■□□□□ 0.54
ATG4B-206ENST00000405546 RPAP2Q8IXW5 612 aaPredicted RBP18.4■□□□□ 0.54
ATG4B-206ENST00000405546 ANKRD44Q8N8A2 993 aa18.4■□□□□ 0.54
ATG4B-206ENST00000405546 RBSNQ9H1K0 784 aa18.4■□□□□ 0.54
ATG4B-206ENST00000405546 DNTTIP2Q5QJE6 756 aaKnown RBP18.4■□□□□ 0.54
ATG4B-206ENST00000405546 PRDM4Q9UKN5 801 aa18.4■□□□□ 0.54
ATG4B-206ENST00000405546 INTS3Q68E01 1043 aaKnown RBP18.39■□□□□ 0.53
ATG4B-206ENST00000405546 PRPF40AO75400 957 aaKnown RBP18.39■□□□□ 0.53
ATG4B-206ENST00000405546 BAG4O95429 457 aaKnown RBP18.39■□□□□ 0.53
ATG4B-206ENST00000405546 SDSP20132 328 aa18.39■□□□□ 0.53
ATG4B-206ENST00000405546 TTC22Q5TAA0 569 aa18.39■□□□□ 0.53
ATG4B-206ENST00000405546 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.39■□□□□ 0.53
ATG4B-206ENST00000405546 PRIM1P49642 420 aaKnown RBP18.38■□□□□ 0.53
ATG4B-206ENST00000405546 MSH6P52701 1360 aa18.38■□□□□ 0.53
ATG4B-206ENST00000405546 TRHP20396 242 aaPredicted RBP18.38■□□□□ 0.53
ATG4B-206ENST00000405546 CDK12Q9NYV4 1490 aaPredicted RBP18.37■□□□□ 0.53
ATG4B-206ENST00000405546 PLEKHG3A1L390 1219 aa18.36■□□□□ 0.53
ATG4B-206ENST00000405546 SKOR2Q2VWA4 1001 aaPredicted RBP18.36■□□□□ 0.53
ATG4B-206ENST00000405546 PTMAP06454 111 aaKnown RBP18.36■□□□□ 0.53
ATG4B-206ENST00000405546 SNX21Q969T3 373 aa18.36■□□□□ 0.53
ATG4B-206ENST00000405546 KIF2CQ99661 725 aa18.36■□□□□ 0.53
ATG4B-206ENST00000405546 AK9Q5TCS8 1911 aa18.35■□□□□ 0.53
ATG4B-206ENST00000405546 PTCH1Q13635 1447 aa18.35■□□□□ 0.53
ATG4B-206ENST00000405546 GNAI2P04899 355 aa18.35■□□□□ 0.53
ATG4B-206ENST00000405546 DDIT3P35638 169 aa18.35■□□□□ 0.53
ATG4B-206ENST00000405546 ZSCAN23Q3MJ62 389 aa18.34■□□□□ 0.53
ATG4B-206ENST00000405546 ZNF830Q96NB3 372 aaPredicted RBP18.34■□□□□ 0.53
ATG4B-206ENST00000405546 BCL11BQ9C0K0 894 aaPredicted RBP18.34■□□□□ 0.53
ATG4B-206ENST00000405546 IL1RAPL2Q9NP60 686 aa18.34■□□□□ 0.53
ATG4B-206ENST00000405546 PIK3R4Q99570 1358 aa18.34■□□□□ 0.53
ATG4B-206ENST00000405546 SYCE3A1L190 88 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms