RNA–Protein interactions for RNA: ENST00000405444.3

TBC1D1-204, Transcript of TBC1 domain family member 1, humanhuman

TSL 4

Gene TBC1D1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-204ENST00000405444 HSP90AB2PQ58FF8 381 aa23.32■■□□□ 1.32
TBC1D1-204ENST00000405444 PPP1R1BQ9UD71 204 aaPredicted RBP23.32■■□□□ 1.32
TBC1D1-204ENST00000405444 SHANK3Q9BYB0 1731 aa23.32■■□□□ 1.32
TBC1D1-204ENST00000405444 ANKRD26Q9UPS8 1709 aa23.31■■□□□ 1.32
TBC1D1-204ENST00000405444 PAPPAQ13219 1627 aa23.31■■□□□ 1.32
TBC1D1-204ENST00000405444 SLC27A3Q5K4L6 730 aa23.31■■□□□ 1.32
TBC1D1-204ENST00000405444 TATP17735 454 aaPredicted RBP23.3■■□□□ 1.32
TBC1D1-204ENST00000405444 DOT1LQ8TEK3 1739 aa23.28■■□□□ 1.32
TBC1D1-204ENST00000405444 HSPA5P11021 654 aaKnown RBP23.28■■□□□ 1.32
TBC1D1-204ENST00000405444 PCDH11XQ9BZA7 1347 aa23.28■■□□□ 1.32
TBC1D1-204ENST00000405444 PCDH11YQ9BZA8 1340 aa23.28■■□□□ 1.32
TBC1D1-204ENST00000405444 EMILIN1Q9Y6C2 1016 aa23.27■■□□□ 1.32
TBC1D1-204ENST00000405444 WASHC2AQ641Q2 1341 aa23.27■■□□□ 1.32
TBC1D1-204ENST00000405444 NCAPD2Q15021 1401 aa23.26■■□□□ 1.31
TBC1D1-204ENST00000405444 PRIM1P49642 420 aaKnown RBP23.26■■□□□ 1.31
TBC1D1-204ENST00000405444 HMGB2P26583 209 aaKnown RBP23.25■■□□□ 1.31
TBC1D1-204ENST00000405444 USHBP1Q8N6Y0 703 aa23.25■■□□□ 1.31
TBC1D1-204ENST00000405444 SYTL4Q96C24 671 aaPredicted RBP23.25■■□□□ 1.31
TBC1D1-204ENST00000405444 POLR3GLQ9BT43 218 aa23.25■■□□□ 1.31
TBC1D1-204ENST00000405444 MTFR1LQ9H019 292 aa23.25■■□□□ 1.31
TBC1D1-204ENST00000405444 NSD2O96028 1365 aa23.24■■□□□ 1.31
TBC1D1-204ENST00000405444 MAP2P11137 1827 aaKnown RBP23.24■■□□□ 1.31
TBC1D1-204ENST00000405444 LRRC4BQ9NT99 713 aa23.23■■□□□ 1.31
TBC1D1-204ENST00000405444 LY75O60449 1722 aa23.22■■□□□ 1.31
TBC1D1-204ENST00000405444 QSER1Q2KHR3 1735 aa23.22■■□□□ 1.31
TBC1D1-204ENST00000405444 PPM1GO15355 546 aaPredicted RBP23.22■■□□□ 1.31
TBC1D1-204ENST00000405444 ZBTB7AO95365 584 aa23.22■■□□□ 1.31
TBC1D1-204ENST00000405444 PDGFDQ9GZP0 370 aaPredicted RBP23.22■■□□□ 1.31
TBC1D1-204ENST00000405444 PLEKHG2Q9H7P9 1386 aa23.22■■□□□ 1.31
TBC1D1-204ENST00000405444 DCAF8L1A6NGE4 600 aa23.21■■□□□ 1.31
TBC1D1-204ENST00000405444 PKD1L3Q7Z443 1732 aa23.21■■□□□ 1.31
TBC1D1-204ENST00000405444 PTGER2P43116 358 aa23.2■■□□□ 1.3
TBC1D1-204ENST00000405444 AKT1S1Q96B36 256 aa23.2■■□□□ 1.3
TBC1D1-204ENST00000405444 POLKQ9UBT6 870 aa23.2■■□□□ 1.3
TBC1D1-204ENST00000405444 SLC16A10Q8TF71 515 aa23.19■■□□□ 1.3
TBC1D1-204ENST00000405444 PANK3Q9H999 370 aa23.19■■□□□ 1.3
TBC1D1-204ENST00000405444 ZNF827Q17R98 1081 aa23.18■■□□□ 1.3
TBC1D1-204ENST00000405444 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.18■■□□□ 1.39e-8■■■■□ 23.3
TBC1D1-204ENST00000405444 SPG7Q9UQ90 795 aa23.18■■□□□ 1.3
TBC1D1-204ENST00000405444 ATF5Q9Y2D1 282 aaPredicted RBP23.17■■□□□ 1.3
TBC1D1-204ENST00000405444 CYP27B1O15528 508 aa23.15■■□□□ 1.3
TBC1D1-204ENST00000405444 EYA1Q99502 592 aa23.15■■□□□ 1.3
TBC1D1-204ENST00000405444 SGIP1Q9BQI5 828 aa23.15■■□□□ 1.3
TBC1D1-204ENST00000405444 CCNL1Q9UK58 526 aaPredicted RBP23.15■■□□□ 1.3
TBC1D1-204ENST00000405444 NKX1-1Q15270 411 aaPredicted RBP23.14■■□□□ 1.29
TBC1D1-204ENST00000405444 TFCP2L1Q9NZI6 479 aa23.13■■□□□ 1.29
TBC1D1-204ENST00000405444 SMARCC1Q92922 1105 aaPredicted RBP23.12■■□□□ 1.29
TBC1D1-204ENST00000405444 TNNT2P45379 298 aaPredicted RBP23.11■■□□□ 1.29
TBC1D1-204ENST00000405444 EIF4A2Q14240 407 aaKnown RBP23.11■■□□□ 1.29
TBC1D1-204ENST00000405444 KNSTRNQ9Y448 316 aa23.11■■□□□ 1.29
TBC1D1-204ENST00000405444 MAP3K5Q99683 1374 aa23.11■■□□□ 1.29
TBC1D1-204ENST00000405444 PNPLA7Q6ZV29 1317 aa23.1■■□□□ 1.29
TBC1D1-204ENST00000405444 ARXQ96QS3 562 aa23.1■■□□□ 1.29
TBC1D1-204ENST00000405444 COL24A1Q17RW2 1714 aa23.09■■□□□ 1.29
TBC1D1-204ENST00000405444 PALLDQ8WX93 1383 aa23.09■■□□□ 1.29
TBC1D1-204ENST00000405444 IGSF1Q8N6C5 1336 aa23.08■■□□□ 1.29
TBC1D1-204ENST00000405444 TOGARAM1Q9Y4F4 1720 aa23.08■■□□□ 1.29
TBC1D1-204ENST00000405444 ITGB4P16144 1822 aa23.08■■□□□ 1.29
TBC1D1-204ENST00000405444 TUBGCP6Q96RT7 1819 aa23.08■■□□□ 1.29
TBC1D1-204ENST00000405444 MPRIPQ6WCQ1 1025 aa23.08■■□□□ 1.29
TBC1D1-204ENST00000405444 MORC1Q86VD1 984 aa23.08■■□□□ 1.29
TBC1D1-204ENST00000405444 IFNL2Q8IZJ0 200 aa23.08■■□□□ 1.29
TBC1D1-204ENST00000405444 FHDC1Q9C0D6 1143 aaPredicted RBP23.08■■□□□ 1.29
TBC1D1-204ENST00000405444 POLD1P28340 1107 aa23.07■■□□□ 1.28
TBC1D1-204ENST00000405444 KCNQ4P56696 695 aa23.07■■□□□ 1.28
TBC1D1-204ENST00000405444 SYT17Q9BSW7 474 aa23.07■■□□□ 1.28
TBC1D1-204ENST00000405444 C5P01031 1676 aa23.06■■□□□ 1.28
TBC1D1-204ENST00000405444 FLAD1Q8NFF5 587 aa23.05■■□□□ 1.28
TBC1D1-204ENST00000405444 PHKG2P15735 406 aa23.04■■□□□ 1.28
TBC1D1-204ENST00000405444 KIF7Q2M1P5 1343 aa23.04■■□□□ 1.28
TBC1D1-204ENST00000405444 TAF1LQ8IZX4 1826 aa23.03■■□□□ 1.28
TBC1D1-204ENST00000405444 PIGBQ92521 554 aa23.03■■□□□ 1.28
TBC1D1-204ENST00000405444 HSP90AB1P08238 724 aaKnown RBP23.02■■□□□ 1.28
TBC1D1-204ENST00000405444 YY1P25490 414 aa23.02■■□□□ 1.28
TBC1D1-204ENST00000405444 TMOD3Q9NYL9 352 aa23.02■■□□□ 1.28
TBC1D1-204ENST00000405444 AMOTQ4VCS5 1084 aa23.01■■□□□ 1.27
TBC1D1-204ENST00000405444 PLEKHO1Q53GL0 409 aaPredicted RBP23■■□□□ 1.27
TBC1D1-204ENST00000405444 AMER1Q5JTC6 1135 aaPredicted RBP23■■□□□ 1.27
TBC1D1-204ENST00000405444 C4BP0C0L5 1744 aa22.99■■□□□ 1.27
TBC1D1-204ENST00000405444 ERVV-2B6SEH9 535 aa22.98■■□□□ 1.27
TBC1D1-204ENST00000405444 COL23A1Q86Y22 540 aaPredicted RBP22.98■■□□□ 1.27
TBC1D1-204ENST00000405444 MSH5O43196 834 aa22.97■■□□□ 1.27
TBC1D1-204ENST00000405444 DCAF5Q96JK2 942 aa22.97■■□□□ 1.27
TBC1D1-204ENST00000405444 AK7Q96M32 723 aa22.97■■□□□ 1.27
TBC1D1-204ENST00000405444 LOC102724428A0A0B4J2F2 783 aa22.96■■□□□ 1.27
TBC1D1-204ENST00000405444 SIK1P57059 783 aa22.96■■□□□ 1.27
TBC1D1-204ENST00000405444 KDRP35968 1356 aa22.95■■□□□ 1.26
TBC1D1-204ENST00000405444 PER1O15534 1290 aaPredicted RBP22.93■■□□□ 1.26
TBC1D1-204ENST00000405444 IL13P35225 146 aa22.93■■□□□ 1.26
TBC1D1-204ENST00000405444 ZNF530Q6P9A1 599 aaPredicted RBP22.93■■□□□ 1.26
TBC1D1-204ENST00000405444 ZNF831Q5JPB2 1677 aa22.93■■□□□ 1.26
TBC1D1-204ENST00000405444 NPC1L1Q9UHC9 1359 aa22.92■■□□□ 1.26
TBC1D1-204ENST00000405444 SSFA2P28290 1259 aa22.92■■□□□ 1.26
TBC1D1-204ENST00000405444 C1orf141Q5JVX7 400 aa22.92■■□□□ 1.26
TBC1D1-204ENST00000405444 ASAP1Q9ULH1 1129 aa22.92■■□□□ 1.26
TBC1D1-204ENST00000405444 UBR3Q6ZT12 1888 aa22.92■■□□□ 1.26
TBC1D1-204ENST00000405444 SULT6B1Q6IMI4 303 aa22.91■■□□□ 1.26
TBC1D1-204ENST00000405444 ATG3Q9NT62 314 aa22.91■■□□□ 1.26
TBC1D1-204ENST00000405444 ATP6V1AP38606 617 aa22.9■■□□□ 1.26
TBC1D1-204ENST00000405444 AEBP1Q8IUX7 1158 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms