RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 PKD1L3Q7Z443 1732 aa29.08■■■□□ 2.24
EPCAM-202ENST00000405271 NEFMP07197 916 aa29.07■■■□□ 2.24
EPCAM-202ENST00000405271 PRKAR2BP31323 418 aa29.07■■■□□ 2.24
EPCAM-202ENST00000405271 CSB-PGBD3P0DP91 1061 aa29.06■■■□□ 2.24
EPCAM-202ENST00000405271 NBPF6Q5VWK0 638 aa29.06■■■□□ 2.24
EPCAM-202ENST00000405271 AEBP1Q8IUX7 1158 aa29.06■■■□□ 2.24
EPCAM-202ENST00000405271 NBPF4Q96M43 638 aa29.06■■■□□ 2.24
EPCAM-202ENST00000405271 BARGINQ6ZT62 677 aa29.04■■■□□ 2.24
EPCAM-202ENST00000405271 TCP11L2Q8N4U5 519 aa29.04■■■□□ 2.24
EPCAM-202ENST00000405271 PLEKHG2Q9H7P9 1386 aa29.04■■■□□ 2.24
EPCAM-202ENST00000405271 CRB1P82279 1406 aa29.04■■■□□ 2.24
EPCAM-202ENST00000405271 NGEFQ8N5V2 710 aa29.03■■■□□ 2.24
EPCAM-202ENST00000405271 ZBED9Q6R2W3 1325 aa29.03■■■□□ 2.24
EPCAM-202ENST00000405271 BRWD3Q6RI45 1802 aa29.01■■■□□ 2.23
EPCAM-202ENST00000405271 CCDC125Q86Z20 511 aa29.01■■■□□ 2.23
EPCAM-202ENST00000405271 NLRP2Q9NX02 1062 aa29.01■■■□□ 2.23
EPCAM-202ENST00000405271 APAF1O14727 1248 aa29■■■□□ 2.23
EPCAM-202ENST00000405271 USHBP1Q8N6Y0 703 aa29■■■□□ 2.23
EPCAM-202ENST00000405271 THRAP3Q9Y2W1 955 aaKnown RBP29■■■□□ 2.23
EPCAM-202ENST00000405271 NCBP3Q53F19 620 aaKnown RBP28.99■■■□□ 2.23
EPCAM-202ENST00000405271 TOM1L2Q6ZVM7 507 aa28.99■■■□□ 2.23
EPCAM-202ENST00000405271 SHANK3Q9BYB0 1731 aa28.98■■■□□ 2.23
EPCAM-202ENST00000405271 FAM182BQ5T319 152 aa28.97■■■□□ 2.23
EPCAM-202ENST00000405271 THSD7AQ9UPZ6 1657 aa28.96■■■□□ 2.23
EPCAM-202ENST00000405271 CARD10Q9BWT7 1032 aa28.96■■■□□ 2.23
EPCAM-202ENST00000405271 MEGF6O75095 1541 aa28.95■■■□□ 2.22
EPCAM-202ENST00000405271 PHACTR3Q96KR7 559 aa28.94■■■□□ 2.22
EPCAM-202ENST00000405271 TMPOP42166 694 aaKnown RBP28.94■■■□□ 2.22
EPCAM-202ENST00000405271 NFE2L2Q16236 605 aa28.93■■■□□ 2.22
EPCAM-202ENST00000405271 RAPGEF4Q8WZA2 1011 aa28.91■■■□□ 2.22
EPCAM-202ENST00000405271 LRRC37A3O60309 1634 aa28.91■■■□□ 2.22
EPCAM-202ENST00000405271 OVOS2A0A0G2JMS6 1433 aa28.91■■■□□ 2.22
EPCAM-202ENST00000405271 SCN11AQ9UI33 1791 aa28.9■■■□□ 2.22
EPCAM-202ENST00000405271 PDE3BQ13370 1112 aa28.9■■■□□ 2.22
EPCAM-202ENST00000405271 CCDC27Q2M243 656 aa28.9■■■□□ 2.22
EPCAM-202ENST00000405271 GAS2L2Q8NHY3 880 aa28.9■■■□□ 2.22
EPCAM-202ENST00000405271 SENP3-EIF4A1A0A087X0R7 540 aa28.89■■■□□ 2.21
EPCAM-202ENST00000405271 RRP7AQ9Y3A4 280 aaKnown RBP28.89■■■□□ 2.21
EPCAM-202ENST00000405271 ADAMTS7Q9UKP4 1686 aa28.88■■■□□ 2.21
EPCAM-202ENST00000405271 TATP17735 454 aaPredicted RBP28.88■■■□□ 2.21
EPCAM-202ENST00000405271 AMOTQ4VCS5 1084 aa28.87■■■□□ 2.21
EPCAM-202ENST00000405271 SALL2Q9Y467 1007 aaPredicted RBP28.87■■■□□ 2.21
EPCAM-202ENST00000405271 DISP2A7MBM2 1401 aa28.87■■■□□ 2.21
EPCAM-202ENST00000405271 ZNF521Q96K83 1311 aa28.87■■■□□ 2.21
EPCAM-202ENST00000405271 RIPK4P57078 832 aa28.86■■■□□ 2.21
EPCAM-202ENST00000405271 LMOD3Q0VAK6 560 aa28.86■■■□□ 2.21
EPCAM-202ENST00000405271 SF3B2Q13435 895 aaKnown RBP28.86■■■□□ 2.21
EPCAM-202ENST00000405271 NEUROD2Q15784 382 aa28.86■■■□□ 2.21
EPCAM-202ENST00000405271 MTHFSDQ2M296 383 aaKnown RBP28.85■■■□□ 2.21
EPCAM-202ENST00000405271 PLEKHO1Q53GL0 409 aaPredicted RBP28.85■■■□□ 2.21
EPCAM-202ENST00000405271 FAM196AQ6ZSG2 479 aa28.85■■■□□ 2.21
EPCAM-202ENST00000405271 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.84■■■□□ 2.211e-7■■□□□ 12.1
EPCAM-202ENST00000405271 IL2RBP14784 551 aa28.84■■■□□ 2.21
EPCAM-202ENST00000405271 DEFB132Q7Z7B7 95 aa28.84■■■□□ 2.21
EPCAM-202ENST00000405271 CDCA7Q9BWT1 371 aaPredicted RBP28.83■■■□□ 2.21
EPCAM-202ENST00000405271 MAP3K5Q99683 1374 aa28.82■■■□□ 2.2
EPCAM-202ENST00000405271 SIPA1L3O60292 1781 aaPredicted RBP28.82■■■□□ 2.2
EPCAM-202ENST00000405271 WWC1Q8IX03 1113 aa28.82■■■□□ 2.2
EPCAM-202ENST00000405271 DDB1Q16531 1140 aa28.81■■■□□ 2.2
EPCAM-202ENST00000405271 TRIM35Q9UPQ4 493 aa28.81■■■□□ 2.2
EPCAM-202ENST00000405271 SPG7Q9UQ90 795 aa28.8■■■□□ 2.2
EPCAM-202ENST00000405271 HTATSF1O43719 755 aaKnown RBP28.78■■■□□ 2.2
EPCAM-202ENST00000405271 CENPBP07199 599 aaPredicted RBP28.78■■■□□ 2.2
EPCAM-202ENST00000405271 ZNF530Q6P9A1 599 aaPredicted RBP28.78■■■□□ 2.2
EPCAM-202ENST00000405271 TRIM37O94972 964 aa28.77■■■□□ 2.2
EPCAM-202ENST00000405271 WDR63Q8IWG1 891 aa28.77■■■□□ 2.2
EPCAM-202ENST00000405271 TNS2Q63HR2 1409 aa28.76■■■□□ 2.2
EPCAM-202ENST00000405271 GNAT3A8MTJ3 354 aa28.76■■■□□ 2.19
EPCAM-202ENST00000405271 AKAP4Q5JQC9 854 aa28.76■■■□□ 2.19
EPCAM-202ENST00000405271 GOLGA2Q08379 1002 aa28.75■■■□□ 2.19
EPCAM-202ENST00000405271 C1orf141Q5JVX7 400 aa28.75■■■□□ 2.19
EPCAM-202ENST00000405271 PCDH11XQ9BZA7 1347 aa28.75■■■□□ 2.19
EPCAM-202ENST00000405271 PCDH11YQ9BZA8 1340 aa28.75■■■□□ 2.19
EPCAM-202ENST00000405271 CALD1Q05682 793 aaKnown RBP28.74■■■□□ 2.19
EPCAM-202ENST00000405271 EXOC5O00471 708 aa28.74■■■□□ 2.19
EPCAM-202ENST00000405271 BAG6P46379 1132 aa28.74■■■□□ 2.19
EPCAM-202ENST00000405271 RTF1Q92541 710 aaKnown RBP28.74■■■□□ 2.19
EPCAM-202ENST00000405271 IL16Q14005 1332 aa28.73■■■□□ 2.19
EPCAM-202ENST00000405271 MARCH10Q8NA82 808 aaPredicted RBP28.73■■■□□ 2.19
EPCAM-202ENST00000405271 ZCRB1Q8TBF4 217 aaKnown RBP28.73■■■□□ 2.19
EPCAM-202ENST00000405271 KDM3BQ7LBC6 1761 aa28.72■■■□□ 2.19
EPCAM-202ENST00000405271 TOGARAM1Q9Y4F4 1720 aa28.72■■■□□ 2.19
EPCAM-202ENST00000405271 ITGB4P16144 1822 aa28.71■■■□□ 2.19
EPCAM-202ENST00000405271 EN1Q05925 392 aaPredicted RBP28.7■■■□□ 2.19
EPCAM-202ENST00000405271 IFNL2Q8IZJ0 200 aa28.7■■■□□ 2.19
EPCAM-202ENST00000405271 SRCAPQ6ZRS2 3230 aa28.69■■■□□ 2.18
EPCAM-202ENST00000405271 E9PSI1 815 aa28.69■■■□□ 2.18
EPCAM-202ENST00000405271 PHKG2P15735 406 aa28.69■■■□□ 2.18
EPCAM-202ENST00000405271 CEMIPQ8WUJ3 1361 aa28.68■■■□□ 2.18
EPCAM-202ENST00000405271 MRC1P22897 1456 aa28.68■■■□□ 2.18
EPCAM-202ENST00000405271 DOT1LQ8TEK3 1739 aa28.68■■■□□ 2.18
EPCAM-202ENST00000405271 APBA3O96018 575 aa28.67■■■□□ 2.18
EPCAM-202ENST00000405271 HSP90AB1P08238 724 aaKnown RBP28.67■■■□□ 2.18
EPCAM-202ENST00000405271 SLFN5Q08AF3 891 aa28.66■■■□□ 2.18
EPCAM-202ENST00000405271 MCM10Q7L590 875 aa28.66■■■□□ 2.18
EPCAM-202ENST00000405271 CDCA7LQ96GN5 454 aa28.66■■■□□ 2.18
EPCAM-202ENST00000405271 KDM6AO15550 1401 aaPredicted RBP28.66■■■□□ 2.18
EPCAM-202ENST00000405271 CYP27B1O15528 508 aa28.65■■■□□ 2.18
EPCAM-202ENST00000405271 DCTN1Q14203 1278 aa28.65■■■□□ 2.18
EPCAM-202ENST00000405271 THUMPD2Q9BTF0 503 aaKnown RBP28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms