RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 PLEKHO1Q53GL0 409 aaPredicted RBP20.82■□□□□ 0.92
CDPF1-204ENST00000404744 BARGINQ6ZT62 677 aa20.82■□□□□ 0.92
CDPF1-204ENST00000404744 PLEKHF1Q96S99 279 aa20.82■□□□□ 0.92
CDPF1-204ENST00000404744 FAM98CQ17RN3 349 aaKnown RBP20.81■□□□□ 0.92
CDPF1-204ENST00000404744 AMOTQ4VCS5 1084 aa20.81■□□□□ 0.92
CDPF1-204ENST00000404744 SPG7Q9UQ90 795 aa20.8■□□□□ 0.92
CDPF1-204ENST00000404744 EXOC5O00471 708 aa20.78■□□□□ 0.92
CDPF1-204ENST00000404744 RBM6P78332 1123 aaKnown RBP20.78■□□□□ 0.92
CDPF1-204ENST00000404744 PHACTR3Q96KR7 559 aa20.78■□□□□ 0.92
CDPF1-204ENST00000404744 GAS2L2Q8NHY3 880 aa20.78■□□□□ 0.92
CDPF1-204ENST00000404744 ZCRB1Q8TBF4 217 aaKnown RBP20.78■□□□□ 0.92
CDPF1-204ENST00000404744 MEGF6O75095 1541 aa20.77■□□□□ 0.92
CDPF1-204ENST00000404744 PLEKHG2Q9H7P9 1386 aa20.77■□□□□ 0.92
CDPF1-204ENST00000404744 APAF1O14727 1248 aa20.77■□□□□ 0.92
CDPF1-204ENST00000404744 RXRBP28702 533 aa20.77■□□□□ 0.92
CDPF1-204ENST00000404744 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.77■□□□□ 0.92
CDPF1-204ENST00000404744 DDB1Q16531 1140 aa20.76■□□□□ 0.91
CDPF1-204ENST00000404744 MTHFSDQ2M296 383 aaKnown RBP20.76■□□□□ 0.91
CDPF1-204ENST00000404744 OVOS2A0A0G2JMS6 1433 aa20.76■□□□□ 0.91
CDPF1-204ENST00000404744 PARP4Q9UKK3 1724 aaKnown RBP20.76■□□□□ 0.91
CDPF1-204ENST00000404744 DISP2A7MBM2 1401 aa20.75■□□□□ 0.91
CDPF1-204ENST00000404744 NEUROD2Q15784 382 aa20.75■□□□□ 0.91
CDPF1-204ENST00000404744 ZNF530Q6P9A1 599 aaPredicted RBP20.75■□□□□ 0.91
CDPF1-204ENST00000404744 GLI3P10071 1580 aa20.74■□□□□ 0.91
CDPF1-204ENST00000404744 NFE2L2Q16236 605 aa20.74■□□□□ 0.91
CDPF1-204ENST00000404744 C1orf141Q5JVX7 400 aa20.74■□□□□ 0.91
CDPF1-204ENST00000404744 TMPOP42166 694 aaKnown RBP20.73■□□□□ 0.91
CDPF1-204ENST00000404744 DDX54Q8TDD1 881 aaKnown RBP20.73■□□□□ 0.91
CDPF1-204ENST00000404744 RRP7AQ9Y3A4 280 aaKnown RBP20.73■□□□□ 0.91
CDPF1-204ENST00000404744 PCDH11XQ9BZA7 1347 aa20.72■□□□□ 0.91
CDPF1-204ENST00000404744 PCDH11YQ9BZA8 1340 aa20.72■□□□□ 0.91
CDPF1-204ENST00000404744 ONECUT3O60422 494 aaPredicted RBP20.72■□□□□ 0.91
CDPF1-204ENST00000404744 RIPK4P57078 832 aa20.72■□□□□ 0.91
CDPF1-204ENST00000404744 IFNL2Q8IZJ0 200 aa20.72■□□□□ 0.91
CDPF1-204ENST00000404744 WNK3Q9BYP7 1800 aa20.71■□□□□ 0.91
CDPF1-204ENST00000404744 SENP3-EIF4A1A0A087X0R7 540 aa20.71■□□□□ 0.91
CDPF1-204ENST00000404744 HNRNPUQ00839 825 aaKnown RBP eCLIP20.71■□□□□ 0.91
CDPF1-204ENST00000404744 PDE3BQ13370 1112 aa20.71■□□□□ 0.91
CDPF1-204ENST00000404744 AKAP4Q5JQC9 854 aa20.71■□□□□ 0.91
CDPF1-204ENST00000404744 SEPT12Q8IYM1 358 aa20.71■□□□□ 0.91
CDPF1-204ENST00000404744 SALL2Q9Y467 1007 aaPredicted RBP20.71■□□□□ 0.91
CDPF1-204ENST00000404744 LMOD3Q0VAK6 560 aa20.7■□□□□ 0.9
CDPF1-204ENST00000404744 RTF1Q92541 710 aaKnown RBP20.7■□□□□ 0.9
CDPF1-204ENST00000404744 GNAT3A8MTJ3 354 aa20.69■□□□□ 0.9
CDPF1-204ENST00000404744 NGEFQ8N5V2 710 aa20.69■□□□□ 0.9
CDPF1-204ENST00000404744 HSP90AB1P08238 724 aaKnown RBP20.68■□□□□ 0.9
CDPF1-204ENST00000404744 PHKG2P15735 406 aa20.68■□□□□ 0.9
CDPF1-204ENST00000404744 TNS2Q63HR2 1409 aa20.68■□□□□ 0.9
CDPF1-204ENST00000404744 YTHDC1Q96MU7 727 aaKnown RBP20.68■□□□□ 0.9
CDPF1-204ENST00000404744 PKD1L3Q7Z443 1732 aa20.67■□□□□ 0.9
CDPF1-204ENST00000404744 MAP3K5Q99683 1374 aa20.67■□□□□ 0.9
CDPF1-204ENST00000404744 CYP27B1O15528 508 aa20.67■□□□□ 0.9
CDPF1-204ENST00000404744 HTATSF1O43719 755 aaKnown RBP20.67■□□□□ 0.9
CDPF1-204ENST00000404744 THSD7AQ9UPZ6 1657 aa20.65■□□□□ 0.9
CDPF1-204ENST00000404744 NCBP3Q53F19 620 aaKnown RBP20.65■□□□□ 0.9
CDPF1-204ENST00000404744 LRRC37A3O60309 1634 aa20.64■□□□□ 0.9
CDPF1-204ENST00000404744 MPRIPQ6WCQ1 1025 aa20.63■□□□□ 0.89
CDPF1-204ENST00000404744 DCAF5Q96JK2 942 aa20.63■□□□□ 0.89
CDPF1-204ENST00000404744 CCDC27Q2M243 656 aa20.63■□□□□ 0.89
CDPF1-204ENST00000404744 MARCH10Q8NA82 808 aaPredicted RBP20.63■□□□□ 0.89
CDPF1-204ENST00000404744 MCM10Q7L590 875 aa20.62■□□□□ 0.89
CDPF1-204ENST00000404744 KRT27Q7Z3Y8 459 aa20.62■□□□□ 0.89
CDPF1-204ENST00000404744 TRIM35Q9UPQ4 493 aa20.62■□□□□ 0.89
CDPF1-204ENST00000404744 RNMTO43148 476 aaKnown RBP20.61■□□□□ 0.89
CDPF1-204ENST00000404744 CALD1Q05682 793 aaKnown RBP20.61■□□□□ 0.89
CDPF1-204ENST00000404744 DCTN1Q14203 1278 aa20.61■□□□□ 0.89
CDPF1-204ENST00000404744 NKX1-1Q15270 411 aaPredicted RBP20.61■□□□□ 0.89
CDPF1-204ENST00000404744 WWC1Q8IX03 1113 aa20.61■□□□□ 0.89
CDPF1-204ENST00000404744 TEFQ10587 303 aa20.59■□□□□ 0.89
CDPF1-204ENST00000404744 IL17REQ8NFR9 667 aa20.59■□□□□ 0.89
CDPF1-204ENST00000404744 LGR6Q9HBX8 967 aa20.59■□□□□ 0.89
CDPF1-204ENST00000404744 SHANK3Q9BYB0 1731 aa20.59■□□□□ 0.89
CDPF1-204ENST00000404744 DLG5Q8TDM6 1919 aa20.59■□□□□ 0.89
CDPF1-204ENST00000404744 RGS12O14924 1447 aa20.59■□□□□ 0.89
CDPF1-204ENST00000404744 CABP4P57796 275 aa20.57■□□□□ 0.88
CDPF1-204ENST00000404744 WDR63Q8IWG1 891 aa20.57■□□□□ 0.88
CDPF1-204ENST00000404744 THUMPD2Q9BTF0 503 aaKnown RBP20.57■□□□□ 0.88
CDPF1-204ENST00000404744 ZBED9Q6R2W3 1325 aa20.56■□□□□ 0.88
CDPF1-204ENST00000404744 ERVV-2B6SEH9 535 aa20.56■□□□□ 0.88
CDPF1-204ENST00000404744 FAM182BQ5T319 152 aa20.55■□□□□ 0.88
CDPF1-204ENST00000404744 SYTL4Q96C24 671 aaPredicted RBP20.55■□□□□ 0.88
CDPF1-204ENST00000404744 KDM6AO15550 1401 aaPredicted RBP20.55■□□□□ 0.88
CDPF1-204ENST00000404744 FAM196AQ6ZSG2 479 aa20.54■□□□□ 0.88
CDPF1-204ENST00000404744 LAS1LQ9Y4W2 734 aaKnown RBP20.54■□□□□ 0.88
CDPF1-204ENST00000404744 CEMIPQ8WUJ3 1361 aa20.54■□□□□ 0.88
CDPF1-204ENST00000404744 GOLGA2Q08379 1002 aa20.53■□□□□ 0.88
CDPF1-204ENST00000404744 ACSBG1Q96GR2 724 aa20.53■□□□□ 0.88
CDPF1-204ENST00000404744 SLC52A2Q9HAB3 445 aa20.53■□□□□ 0.88
CDPF1-204ENST00000404744 TMOD3Q9NYL9 352 aa20.53■□□□□ 0.88
CDPF1-204ENST00000404744 TAF7Q15545 349 aaPredicted RBP20.53■□□□□ 0.88
CDPF1-204ENST00000404744 NFATC2IPQ8NCF5 419 aa20.53■□□□□ 0.88
CDPF1-204ENST00000404744 BRWD3Q6RI45 1802 aa20.53■□□□□ 0.88
CDPF1-204ENST00000404744 PRIM1P49642 420 aaKnown RBP20.52■□□□□ 0.87
CDPF1-204ENST00000404744 IL16Q14005 1332 aa20.52■□□□□ 0.87
CDPF1-204ENST00000404744 ZNF521Q96K83 1311 aa20.52■□□□□ 0.87
CDPF1-204ENST00000404744 SCN11AQ9UI33 1791 aa20.51■□□□□ 0.87
CDPF1-204ENST00000404744 GNAI1P63096 354 aa20.51■□□□□ 0.87
CDPF1-204ENST00000404744 BTBD11A6QL63 1104 aa20.5■□□□□ 0.87
CDPF1-204ENST00000404744 IFT57Q9NWB7 429 aa20.5■□□□□ 0.87
CDPF1-204ENST00000404744 CFAP44Q96MT7 982 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms