RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 DIAPH1O60610 1272 aaKnown RBP19.67■□□□□ 0.74
CDPF1-203ENST00000404583 TRIM37O94972 964 aa19.67■□□□□ 0.74
CDPF1-203ENST00000404583 SBF2Q86WG5 1849 aa19.67■□□□□ 0.74
CDPF1-203ENST00000404583 SHANK3Q9BYB0 1731 aa19.66■□□□□ 0.74
CDPF1-203ENST00000404583 RGPD1P0DJD0 1748 aa19.65■□□□□ 0.74
CDPF1-203ENST00000404583 COL3A1P02461 1466 aaPredicted RBP19.64■□□□□ 0.74
CDPF1-203ENST00000404583 SULT6B1Q6IMI4 303 aa19.64■□□□□ 0.73
CDPF1-203ENST00000404583 AEBP1Q8IUX7 1158 aa19.64■□□□□ 0.73
CDPF1-203ENST00000404583 RALBP1Q15311 655 aa19.63■□□□□ 0.73
CDPF1-203ENST00000404583 CFAP53Q96M91 514 aa19.63■□□□□ 0.73
CDPF1-203ENST00000404583 TNS1Q9HBL0 1735 aaKnown RBP19.63■□□□□ 0.73
CDPF1-203ENST00000404583 BCL9O00512 1426 aa19.61■□□□□ 0.73
CDPF1-203ENST00000404583 EN1Q05925 392 aaPredicted RBP19.61■□□□□ 0.73
CDPF1-203ENST00000404583 ACSBG1Q96GR2 724 aa19.61■□□□□ 0.73
CDPF1-203ENST00000404583 PKD1L3Q7Z443 1732 aa19.61■□□□□ 0.73
CDPF1-203ENST00000404583 U2SURPO15042 1029 aaKnown RBP19.6■□□□□ 0.73
CDPF1-203ENST00000404583 HMOX1P09601 288 aa19.6■□□□□ 0.73
CDPF1-203ENST00000404583 PTF1AQ7RTS3 328 aa19.6■□□□□ 0.73
CDPF1-203ENST00000404583 KDRP35968 1356 aa19.6■□□□□ 0.73
CDPF1-203ENST00000404583 BAG6P46379 1132 aa19.59■□□□□ 0.73
CDPF1-203ENST00000404583 SPG7Q9UQ90 795 aa19.59■□□□□ 0.73
CDPF1-203ENST00000404583 PCDH11XQ9BZA7 1347 aa19.59■□□□□ 0.73
CDPF1-203ENST00000404583 PCDH11YQ9BZA8 1340 aa19.59■□□□□ 0.73
CDPF1-203ENST00000404583 PSDA5PKW4 1024 aaPredicted RBP19.59■□□□□ 0.73
CDPF1-203ENST00000404583 CYP27B1O15528 508 aa19.59■□□□□ 0.73
CDPF1-203ENST00000404583 KCNQ2O43526 872 aa19.59■□□□□ 0.73
CDPF1-203ENST00000404583 APBA3O96018 575 aa19.59■□□□□ 0.73
CDPF1-203ENST00000404583 BCL11BQ9C0K0 894 aaPredicted RBP19.58■□□□□ 0.72
CDPF1-203ENST00000404583 PRKRIP1Q9H875 184 aaPredicted RBP19.58■□□□□ 0.72
CDPF1-203ENST00000404583 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.58■□□□□ 0.72
CDPF1-203ENST00000404583 PLEKHO1Q53GL0 409 aaPredicted RBP19.56■□□□□ 0.72
CDPF1-203ENST00000404583 MYBBP1AQ9BQG0 1328 aaKnown RBP19.55■□□□□ 0.72
CDPF1-203ENST00000404583 NUDCQ9Y266 331 aa19.55■□□□□ 0.72
CDPF1-203ENST00000404583 NHSQ6T4R5 1651 aa19.55■□□□□ 0.72
CDPF1-203ENST00000404583 DOT1LQ8TEK3 1739 aa19.54■□□□□ 0.72
CDPF1-203ENST00000404583 EZH2Q15910 746 aaKnown RBP19.54■□□□□ 0.72
CDPF1-203ENST00000404583 IFNL2Q8IZJ0 200 aa19.54■□□□□ 0.72
CDPF1-203ENST00000404583 PHKG2P15735 406 aa19.53■□□□□ 0.72
CDPF1-203ENST00000404583 PRIM1P49642 420 aaKnown RBP19.53■□□□□ 0.72
CDPF1-203ENST00000404583 AMOTQ4VCS5 1084 aa19.53■□□□□ 0.72
CDPF1-203ENST00000404583 PLEKHG2Q9H7P9 1386 aa19.53■□□□□ 0.72
CDPF1-203ENST00000404583 U2AF1L5P0DN76 240 aaPredicted RBP19.52■□□□□ 0.72
CDPF1-203ENST00000404583 U2AF1Q01081 240 aaKnown RBP eCLIP19.52■□□□□ 0.72
CDPF1-203ENST00000404583 SYTL4Q96C24 671 aaPredicted RBP19.52■□□□□ 0.72
CDPF1-203ENST00000404583 NKX1-1Q15270 411 aaPredicted RBP19.51■□□□□ 0.71
CDPF1-203ENST00000404583 ZNF530Q6P9A1 599 aaPredicted RBP19.51■□□□□ 0.71
CDPF1-203ENST00000404583 CAMKK2Q96RR4 588 aa19.51■□□□□ 0.71
CDPF1-203ENST00000404583 BTAF1O14981 1849 aa19.51■□□□□ 0.71
CDPF1-203ENST00000404583 PLSCR1O15162 318 aa19.5■□□□□ 0.71
CDPF1-203ENST00000404583 TOGARAM1Q9Y4F4 1720 aa19.5■□□□□ 0.71
CDPF1-203ENST00000404583 ITGB4P16144 1822 aa19.49■□□□□ 0.71
CDPF1-203ENST00000404583 RSPH6AQ9H0K4 717 aa19.49■□□□□ 0.71
CDPF1-203ENST00000404583 PRKAR2BP31323 418 aa19.48■□□□□ 0.71
CDPF1-203ENST00000404583 R3HDM1Q15032 1099 aaKnown RBP19.48■□□□□ 0.71
CDPF1-203ENST00000404583 MTHFSDQ2M296 383 aaKnown RBP19.48■□□□□ 0.71
CDPF1-203ENST00000404583 C1orf141Q5JVX7 400 aa19.48■□□□□ 0.71
CDPF1-203ENST00000404583 FCHSD2O94868 740 aa19.46■□□□□ 0.71
CDPF1-203ENST00000404583 MPRIPQ6WCQ1 1025 aa19.46■□□□□ 0.71
CDPF1-203ENST00000404583 RREB1Q92766 1687 aa19.46■□□□□ 0.71
CDPF1-203ENST00000404583 LRP5O75197 1615 aa19.45■□□□□ 0.7
CDPF1-203ENST00000404583 ANP32CO43423 234 aa19.45■□□□□ 0.7
CDPF1-203ENST00000404583 HSP90AB1P08238 724 aaKnown RBP19.45■□□□□ 0.7
CDPF1-203ENST00000404583 AKAP4Q5JQC9 854 aa19.45■□□□□ 0.7
CDPF1-203ENST00000404583 PHACTR3Q96KR7 559 aa19.45■□□□□ 0.7
CDPF1-203ENST00000404583 NUP188Q5SRE5 1749 aa19.45■□□□□ 0.7
CDPF1-203ENST00000404583 RGPD3A6NKT7 1758 aaPredicted RBP19.45■□□□□ 0.7
CDPF1-203ENST00000404583 RGPD4Q7Z3J3 1758 aa19.45■□□□□ 0.7
CDPF1-203ENST00000404583 PROM2Q8N271 834 aa19.44■□□□□ 0.7
CDPF1-203ENST00000404583 DCAF5Q96JK2 942 aa19.44■□□□□ 0.7
CDPF1-203ENST00000404583 VIRMAQ69YN4 1812 aaKnown RBP19.43■□□□□ 0.7
CDPF1-203ENST00000404583 KDM6AO15550 1401 aaPredicted RBP19.43■□□□□ 0.7
CDPF1-203ENST00000404583 PIGBQ92521 554 aa19.42■□□□□ 0.7
CDPF1-203ENST00000404583 TXNRD1Q16881 649 aa19.42■□□□□ 0.7
CDPF1-203ENST00000404583 SCN11AQ9UI33 1791 aa19.41■□□□□ 0.7
CDPF1-203ENST00000404583 ERVV-2B6SEH9 535 aa19.41■□□□□ 0.7
CDPF1-203ENST00000404583 GAS2L2Q8NHY3 880 aa19.41■□□□□ 0.7
CDPF1-203ENST00000404583 LGR6Q9HBX8 967 aa19.41■□□□□ 0.7
CDPF1-203ENST00000404583 TMOD3Q9NYL9 352 aa19.41■□□□□ 0.7
CDPF1-203ENST00000404583 CCDC184Q52MB2 194 aa19.4■□□□□ 0.7
CDPF1-203ENST00000404583 CABP4P57796 275 aa19.39■□□□□ 0.69
CDPF1-203ENST00000404583 PLEKHF1Q96S99 279 aa19.39■□□□□ 0.69
CDPF1-203ENST00000404583 RNMTO43148 476 aaKnown RBP19.38■□□□□ 0.69
CDPF1-203ENST00000404583 LY75O60449 1722 aa19.38■□□□□ 0.69
CDPF1-203ENST00000404583 GNAT3A8MTJ3 354 aa19.37■□□□□ 0.69
CDPF1-203ENST00000404583 WDR43Q15061 677 aaKnown RBP eCLIP19.37■□□□□ 0.69
CDPF1-203ENST00000404583 NFATC2IPQ8NCF5 419 aa19.37■□□□□ 0.69
CDPF1-203ENST00000404583 PNNQ9H307 717 aaKnown RBP19.37■□□□□ 0.69
CDPF1-203ENST00000404583 ASAP1Q9ULH1 1129 aa19.37■□□□□ 0.69
CDPF1-203ENST00000404583 MAP3K5Q99683 1374 aa19.36■□□□□ 0.69
CDPF1-203ENST00000404583 NEFMP07197 916 aa19.36■□□□□ 0.69
CDPF1-203ENST00000404583 KCNQ4P56696 695 aa19.36■□□□□ 0.69
CDPF1-203ENST00000404583 LRRC4BQ9NT99 713 aa19.36■□□□□ 0.69
CDPF1-203ENST00000404583 IL17REQ8NFR9 667 aa19.35■□□□□ 0.69
CDPF1-203ENST00000404583 ADAMTS8Q9UP79 889 aa19.35■□□□□ 0.69
CDPF1-203ENST00000404583 ADAMTS7Q9UKP4 1686 aa19.35■□□□□ 0.69
CDPF1-203ENST00000404583 PALLDQ8WX93 1383 aa19.35■□□□□ 0.69
CDPF1-203ENST00000404583 NBPF14Q5TI25 921 aa19.34■□□□□ 0.69
CDPF1-203ENST00000404583 SMARCC1Q92922 1105 aaPredicted RBP19.34■□□□□ 0.69
CDPF1-203ENST00000404583 ATG3Q9NT62 314 aa19.34■□□□□ 0.69
CDPF1-203ENST00000404583 DLG5Q8TDM6 1919 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms