RNA–Protein interactions for RNA: ENST00000404525.5

LTBP1-202, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,092 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-202ENST00000404525 RRS1Q15050 365 aaKnown RBP9.74□□□□□ -0.85
LTBP1-202ENST00000404525 TCP11L2Q8N4U5 519 aa9.74□□□□□ -0.85
LTBP1-202ENST00000404525 GPS2Q13227 327 aa9.74□□□□□ -0.85
LTBP1-202ENST00000404525 TSR1Q2NL82 804 aaKnown RBP9.74□□□□□ -0.85
LTBP1-202ENST00000404525 SMC5Q8IY18 1101 aa9.74□□□□□ -0.85
LTBP1-202ENST00000404525 SPINK5Q9NQ38 1064 aaPredicted RBP9.74□□□□□ -0.85
LTBP1-202ENST00000404525 ANKRD36BQ8N2N9 1353 aa9.74□□□□□ -0.85
LTBP1-202ENST00000404525 TPM1P09493 284 aa9.74□□□□□ -0.85
LTBP1-202ENST00000404525 SYTL4Q96C24 671 aaPredicted RBP9.74□□□□□ -0.85
LTBP1-202ENST00000404525 COL17A1Q9UMD9 1497 aaPredicted RBP9.73□□□□□ -0.85
LTBP1-202ENST00000404525 ZC3H6P61129 1189 aaKnown RBP9.73□□□□□ -0.85
LTBP1-202ENST00000404525 SULT6B1Q6IMI4 303 aa9.73□□□□□ -0.85
LTBP1-202ENST00000404525 WDR63Q8IWG1 891 aa9.73□□□□□ -0.85
LTBP1-202ENST00000404525 INO80Q9ULG1 1556 aaPredicted RBP9.73□□□□□ -0.85
LTBP1-202ENST00000404525 SSFA2P28290 1259 aa9.73□□□□□ -0.85
LTBP1-202ENST00000404525 SPG7Q9UQ90 795 aa9.73□□□□□ -0.85
LTBP1-202ENST00000404525 DIP2CQ9Y2E4 1556 aa9.73□□□□□ -0.85
LTBP1-202ENST00000404525 PRPF40AO75400 957 aaKnown RBP9.73□□□□□ -0.85
LTBP1-202ENST00000404525 GAS2L3Q86XJ1 694 aa9.73□□□□□ -0.85
LTBP1-202ENST00000404525 TESK2Q96S53 571 aa9.73□□□□□ -0.85
LTBP1-202ENST00000404525 PPP1R9BQ96SB3 815 aa9.73□□□□□ -0.85
LTBP1-202ENST00000404525 TSPYL4Q9UJ04 414 aa9.73□□□□□ -0.85
LTBP1-202ENST00000404525 PRDM15P57071 1507 aaPredicted RBP9.73□□□□□ -0.85
LTBP1-202ENST00000404525 PLEKHG1Q9ULL1 1385 aa9.72□□□□□ -0.85
LTBP1-202ENST00000404525 ZNF521Q96K83 1311 aa9.72□□□□□ -0.85
LTBP1-202ENST00000404525 FOXD4L6Q3SYB3 417 aaPredicted RBP9.72□□□□□ -0.85
LTBP1-202ENST00000404525 FOXD4L3Q6VB84 417 aaPredicted RBP9.72□□□□□ -0.85
LTBP1-202ENST00000404525 TMX4Q9H1E5 349 aaPredicted RBP9.72□□□□□ -0.85
LTBP1-202ENST00000404525 CREBRFQ8IUR6 639 aa9.72□□□□□ -0.85
LTBP1-202ENST00000404525 LTKP29376 864 aa9.72□□□□□ -0.85
LTBP1-202ENST00000404525 UBAP1LF5GYI3 381 aa9.72□□□□□ -0.85
LTBP1-202ENST00000404525 RNF214Q8ND24 703 aa9.72□□□□□ -0.85
LTBP1-202ENST00000404525 SIRT1Q96EB6 747 aa9.72□□□□□ -0.85
LTBP1-202ENST00000404525 CEP89Q96ST8 783 aa9.72□□□□□ -0.85
LTBP1-202ENST00000404525 NOL7Q9UMY1 257 aaKnown RBP9.71□□□□□ -0.85
LTBP1-202ENST00000404525 MYOM2P54296 1465 aa9.71□□□□□ -0.85
LTBP1-202ENST00000404525 FCHSD2O94868 740 aa9.71□□□□□ -0.86
LTBP1-202ENST00000404525 BAG4O95429 457 aaKnown RBP9.71□□□□□ -0.86
LTBP1-202ENST00000404525 NEXNQ0ZGT2 675 aa9.71□□□□□ -0.86
LTBP1-202ENST00000404525 TPD52L1Q16890 204 aaPredicted RBP9.71□□□□□ -0.86
LTBP1-202ENST00000404525 RNF20Q5VTR2 975 aa9.71□□□□□ -0.86
LTBP1-202ENST00000404525 INTS3Q68E01 1043 aaKnown RBP9.71□□□□□ -0.86
LTBP1-202ENST00000404525 ZNF771Q7L3S4 317 aaPredicted RBP9.71□□□□□ -0.86
LTBP1-202ENST00000404525 TRMT2AQ8IZ69 625 aaKnown RBP9.71□□□□□ -0.86
LTBP1-202ENST00000404525 ABCC11Q96J66 1382 aa9.71□□□□□ -0.86
LTBP1-202ENST00000404525 ZKSCAN5Q9Y2L8 839 aa9.71□□□□□ -0.86
LTBP1-202ENST00000404525 AKAP17AQ02040 695 aaKnown RBP9.7□□□□□ -0.86
LTBP1-202ENST00000404525 RABEP1Q15276 862 aa9.7□□□□□ -0.86
LTBP1-202ENST00000404525 CCDC70Q6NSX1 233 aa9.7□□□□□ -0.86
LTBP1-202ENST00000404525 CCDC94Q9BW85 323 aaPredicted RBP9.7□□□□□ -0.86
LTBP1-202ENST00000404525 C9orf78Q9NZ63 289 aaPredicted RBP9.7□□□□□ -0.86
LTBP1-202ENST00000404525 SYNE3Q6ZMZ3 975 aa9.7□□□□□ -0.86
LTBP1-202ENST00000404525 NPHP4O75161 1426 aaPredicted RBP9.7□□□□□ -0.86
LTBP1-202ENST00000404525 TTC21BQ7Z4L5 1316 aa9.7□□□□□ -0.86
LTBP1-202ENST00000404525 LMTK3Q96Q04 1460 aa9.7□□□□□ -0.86
LTBP1-202ENST00000404525 ARHGEF40Q8TER5 1519 aa9.7□□□□□ -0.86
LTBP1-202ENST00000404525 CDC45O75419 566 aa9.7□□□□□ -0.86
LTBP1-202ENST00000404525 PHF23Q9BUL5 403 aaPredicted RBP9.7□□□□□ -0.86
LTBP1-202ENST00000404525 PIK3C2GO75747 1445 aa9.7□□□□□ -0.86
LTBP1-202ENST00000404525 AGLP35573 1532 aa9.7□□□□□ -0.86
LTBP1-202ENST00000404525 MBD3O95983 291 aa9.7□□□□□ -0.86
LTBP1-202ENST00000404525 ZSCAN23Q3MJ62 389 aa9.7□□□□□ -0.86
LTBP1-202ENST00000404525 HSP90AB4PQ58FF6 505 aa9.7□□□□□ -0.86
LTBP1-202ENST00000404525 RLBP1P12271 317 aa9.69□□□□□ -0.86
LTBP1-202ENST00000404525 CWC22Q9HCG8 908 aaKnown RBP9.69□□□□□ -0.86
LTBP1-202ENST00000404525 IPO7O95373 1038 aaKnown RBP9.69□□□□□ -0.86
LTBP1-202ENST00000404525 CT47B1P0C2W7 299 aaPredicted RBP9.69□□□□□ -0.86
LTBP1-202ENST00000404525 EIF2S2P20042 333 aaKnown RBP9.69□□□□□ -0.86
LTBP1-202ENST00000404525 ZNF530Q6P9A1 599 aaPredicted RBP9.69□□□□□ -0.86
LTBP1-202ENST00000404525 CHD1LQ86WJ1 897 aa9.69□□□□□ -0.86
LTBP1-202ENST00000404525 ANO2Q9NQ90 1003 aa9.69□□□□□ -0.86
LTBP1-202ENST00000404525 DDX58O95786 925 aaKnown RBP9.69□□□□□ -0.86
LTBP1-202ENST00000404525 IFIT2P09913 472 aaKnown RBP9.69□□□□□ -0.86
LTBP1-202ENST00000404525 GTF2E1P29083 439 aaPredicted RBP9.69□□□□□ -0.86
LTBP1-202ENST00000404525 CBX1P83916 185 aa9.69□□□□□ -0.86
LTBP1-202ENST00000404525 ASXL1Q8IXJ9 1541 aa9.69□□□□□ -0.86
LTBP1-202ENST00000404525 ABCA6Q8N139 1617 aa9.68□□□□□ -0.86
LTBP1-202ENST00000404525 MARCH6O60337 910 aa9.68□□□□□ -0.86
LTBP1-202ENST00000404525 TSPY26PQ9H489 355 aa9.68□□□□□ -0.86
LTBP1-202ENST00000404525 SPHKAPQ2M3C7 1700 aa9.68□□□□□ -0.86
LTBP1-202ENST00000404525 LMTK2Q8IWU2 1503 aa9.68□□□□□ -0.86
LTBP1-202ENST00000404525 RBM25P49756 843 aaKnown RBP9.68□□□□□ -0.86
LTBP1-202ENST00000404525 HDAC1Q13547 482 aaPredicted RBP9.68□□□□□ -0.86
LTBP1-202ENST00000404525 FKBP5Q13451 457 aaPredicted RBP9.68□□□□□ -0.86
LTBP1-202ENST00000404525 ATF7IPQ6VMQ6 1270 aa9.68□□□□□ -0.86
LTBP1-202ENST00000404525 ANKRD20A12PQ8NF67 263 aa9.68□□□□□ -0.86
LTBP1-202ENST00000404525 MAP3K4Q9Y6R4 1608 aa9.68□□□□□ -0.86
LTBP1-202ENST00000404525 PES1O00541 588 aaKnown RBP9.67□□□□□ -0.86
LTBP1-202ENST00000404525 ZNF500O60304 480 aaPredicted RBP9.67□□□□□ -0.86
LTBP1-202ENST00000404525 HOOK1Q9UJC3 728 aaKnown RBP9.67□□□□□ -0.86
LTBP1-202ENST00000404525 CEP152O94986 1710 aa9.67□□□□□ -0.86
LTBP1-202ENST00000404525 KIDINS220Q9ULH0 1771 aa9.67□□□□□ -0.86
LTBP1-202ENST00000404525 SYCE3A1L190 88 aa9.67□□□□□ -0.86
LTBP1-202ENST00000404525 TRIM29Q14134 588 aa9.67□□□□□ -0.86
LTBP1-202ENST00000404525 CPLX1O14810 134 aa9.67□□□□□ -0.86
LTBP1-202ENST00000404525 SETQ01105 290 aaPredicted RBP9.67□□□□□ -0.86
LTBP1-202ENST00000404525 CCAR2Q8N163 923 aaKnown RBP9.67□□□□□ -0.86
LTBP1-202ENST00000404525 BICD2Q8TD16 824 aa9.67□□□□□ -0.86
LTBP1-202ENST00000404525 SMC3Q9UQE7 1217 aa9.67□□□□□ -0.86
LTBP1-202ENST00000404525 TNNQ9UQP3 1299 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms