RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.35■□□□□ 0.53
VPREB1-202ENST00000403807 SPG7Q9UQ90 795 aa18.35■□□□□ 0.53
VPREB1-202ENST00000403807 MEGF6O75095 1541 aa18.34■□□□□ 0.53
VPREB1-202ENST00000403807 OVOS2A0A0G2JMS6 1433 aa18.34■□□□□ 0.53
VPREB1-202ENST00000403807 AEBP1Q8IUX7 1158 aa18.34■□□□□ 0.53
VPREB1-202ENST00000403807 HMOX1P09601 288 aa18.33■□□□□ 0.52
VPREB1-202ENST00000403807 PLEKHO1Q53GL0 409 aaPredicted RBP18.33■□□□□ 0.52
VPREB1-202ENST00000403807 COL3A1P02461 1466 aaPredicted RBP18.33■□□□□ 0.52
VPREB1-202ENST00000403807 WNK3Q9BYP7 1800 aa18.33■□□□□ 0.52
VPREB1-202ENST00000403807 LRRC37A3O60309 1634 aa18.32■□□□□ 0.52
VPREB1-202ENST00000403807 SF3B2Q13435 895 aaKnown RBP18.32■□□□□ 0.52
VPREB1-202ENST00000403807 AMOTQ4VCS5 1084 aa18.32■□□□□ 0.52
VPREB1-202ENST00000403807 KDRP35968 1356 aa18.31■□□□□ 0.52
VPREB1-202ENST00000403807 PLEKHG2Q9H7P9 1386 aa18.31■□□□□ 0.52
VPREB1-202ENST00000403807 PCDH11XQ9BZA7 1347 aa18.31■□□□□ 0.52
VPREB1-202ENST00000403807 PCDH11YQ9BZA8 1340 aa18.31■□□□□ 0.52
VPREB1-202ENST00000403807 U2AF1L5P0DN76 240 aaPredicted RBP18.31■□□□□ 0.52
VPREB1-202ENST00000403807 U2AF1Q01081 240 aaKnown RBP eCLIP18.31■□□□□ 0.52
VPREB1-202ENST00000403807 TRIM37O94972 964 aa18.3■□□□□ 0.52
VPREB1-202ENST00000403807 BCL9O00512 1426 aa18.29■□□□□ 0.52
VPREB1-202ENST00000403807 FCHSD2O94868 740 aa18.28■□□□□ 0.52
VPREB1-202ENST00000403807 IFNL2Q8IZJ0 200 aa18.28■□□□□ 0.52
VPREB1-202ENST00000403807 RGPD1P0DJD0 1748 aa18.27■□□□□ 0.52
VPREB1-202ENST00000403807 CYP27B1O15528 508 aa18.27■□□□□ 0.52
VPREB1-202ENST00000403807 ACSBG1Q96GR2 724 aa18.26■□□□□ 0.51
VPREB1-202ENST00000403807 BCL11BQ9C0K0 894 aaPredicted RBP18.26■□□□□ 0.51
VPREB1-202ENST00000403807 PNNQ9H307 717 aaKnown RBP18.26■□□□□ 0.51
VPREB1-202ENST00000403807 PHKG2P15735 406 aa18.25■□□□□ 0.51
VPREB1-202ENST00000403807 NKX1-1Q15270 411 aaPredicted RBP18.25■□□□□ 0.51
VPREB1-202ENST00000403807 C1orf141Q5JVX7 400 aa18.25■□□□□ 0.51
VPREB1-202ENST00000403807 ZNF530Q6P9A1 599 aaPredicted RBP18.25■□□□□ 0.51
VPREB1-202ENST00000403807 RSPH6AQ9H0K4 717 aa18.25■□□□□ 0.51
VPREB1-202ENST00000403807 APBA3O96018 575 aa18.24■□□□□ 0.51
VPREB1-202ENST00000403807 NEFMP07197 916 aa18.24■□□□□ 0.51
VPREB1-202ENST00000403807 HSP90AB1P08238 724 aaKnown RBP18.24■□□□□ 0.51
VPREB1-202ENST00000403807 PRKAR2BP31323 418 aa18.24■□□□□ 0.51
VPREB1-202ENST00000403807 BAG6P46379 1132 aa18.24■□□□□ 0.51
VPREB1-202ENST00000403807 WDR43Q15061 677 aaKnown RBP eCLIP18.23■□□□□ 0.51
VPREB1-202ENST00000403807 KCNQ2O43526 872 aa18.22■□□□□ 0.51
VPREB1-202ENST00000403807 PRIM1P49642 420 aaKnown RBP18.22■□□□□ 0.51
VPREB1-202ENST00000403807 MTHFSDQ2M296 383 aaKnown RBP18.22■□□□□ 0.51
VPREB1-202ENST00000403807 SYTL4Q96C24 671 aaPredicted RBP18.22■□□□□ 0.51
VPREB1-202ENST00000403807 AKAP4Q5JQC9 854 aa18.21■□□□□ 0.51
VPREB1-202ENST00000403807 GAS2L2Q8NHY3 880 aa18.21■□□□□ 0.51
VPREB1-202ENST00000403807 DCAF5Q96JK2 942 aa18.2■□□□□ 0.5
VPREB1-202ENST00000403807 PHACTR3Q96KR7 559 aa18.2■□□□□ 0.5
VPREB1-202ENST00000403807 PKD1L3Q7Z443 1732 aa18.2■□□□□ 0.5
VPREB1-202ENST00000403807 EP400Q96L91 3159 aa18.19■□□□□ 0.5
VPREB1-202ENST00000403807 PTF1AQ7RTS3 328 aa18.19■□□□□ 0.5
VPREB1-202ENST00000403807 DEFB132Q7Z7B7 95 aa18.19■□□□□ 0.5
VPREB1-202ENST00000403807 PLSCR1O15162 318 aa18.18■□□□□ 0.5
VPREB1-202ENST00000403807 EN1Q05925 392 aaPredicted RBP18.18■□□□□ 0.5
VPREB1-202ENST00000403807 SHANK3Q9BYB0 1731 aa18.18■□□□□ 0.5
VPREB1-202ENST00000403807 ERVV-2B6SEH9 535 aa18.17■□□□□ 0.5
VPREB1-202ENST00000403807 DIEXFQ68CQ4 756 aaKnown RBP18.17■□□□□ 0.5
VPREB1-202ENST00000403807 MPRIPQ6WCQ1 1025 aa18.17■□□□□ 0.5
VPREB1-202ENST00000403807 MRS2Q9HD23 443 aa18.17■□□□□ 0.5
VPREB1-202ENST00000403807 ADAMTS8Q9UP79 889 aa18.17■□□□□ 0.5
VPREB1-202ENST00000403807 CCDC184Q52MB2 194 aa18.16■□□□□ 0.5
VPREB1-202ENST00000403807 PLEKHF1Q96S99 279 aa18.16■□□□□ 0.5
VPREB1-202ENST00000403807 MAPK8IP3Q9UPT6 1336 aa18.16■□□□□ 0.5
VPREB1-202ENST00000403807 GNAT3A8MTJ3 354 aa18.15■□□□□ 0.5
VPREB1-202ENST00000403807 CAMKK2Q96RR4 588 aa18.15■□□□□ 0.5
VPREB1-202ENST00000403807 TMOD3Q9NYL9 352 aa18.15■□□□□ 0.5
VPREB1-202ENST00000403807 KAT6BQ8WYB5 2073 aa18.14■□□□□ 0.5
VPREB1-202ENST00000403807 SBF2Q86WG5 1849 aa18.14■□□□□ 0.5
VPREB1-202ENST00000403807 CABP4P57796 275 aa18.14■□□□□ 0.49
VPREB1-202ENST00000403807 EZH2Q15910 746 aaKnown RBP18.14■□□□□ 0.49
VPREB1-202ENST00000403807 RNMTO43148 476 aaKnown RBP18.13■□□□□ 0.49
VPREB1-202ENST00000403807 PIGBQ92521 554 aa18.13■□□□□ 0.49
VPREB1-202ENST00000403807 LGR6Q9HBX8 967 aa18.13■□□□□ 0.49
VPREB1-202ENST00000403807 PNISRQ8TF01 805 aaKnown RBP18.12■□□□□ 0.49
VPREB1-202ENST00000403807 RTF1Q92541 710 aaKnown RBP18.12■□□□□ 0.49
VPREB1-202ENST00000403807 RUNDC1Q96C34 613 aa18.12■□□□□ 0.49
VPREB1-202ENST00000403807 NHSQ6T4R5 1651 aa18.12■□□□□ 0.49
VPREB1-202ENST00000403807 HTATSF1O43719 755 aaKnown RBP18.11■□□□□ 0.49
VPREB1-202ENST00000403807 NFE2L2Q16236 605 aa18.11■□□□□ 0.49
VPREB1-202ENST00000403807 CCDC146Q8IYE0 955 aa18.11■□□□□ 0.49
VPREB1-202ENST00000403807 NFATC2IPQ8NCF5 419 aa18.11■□□□□ 0.49
VPREB1-202ENST00000403807 SMARCC1Q92922 1105 aaPredicted RBP18.11■□□□□ 0.49
VPREB1-202ENST00000403807 MAP3K5Q99683 1374 aa18.11■□□□□ 0.49
VPREB1-202ENST00000403807 KDM6AO15550 1401 aaPredicted RBP18.1■□□□□ 0.49
VPREB1-202ENST00000403807 TNS1Q9HBL0 1735 aaKnown RBP18.09■□□□□ 0.49
VPREB1-202ENST00000403807 TXNRD1Q16881 649 aa18.09■□□□□ 0.49
VPREB1-202ENST00000403807 IL17REQ8NFR9 667 aa18.09■□□□□ 0.49
VPREB1-202ENST00000403807 SLC52A2Q9HAB3 445 aa18.09■□□□□ 0.49
VPREB1-202ENST00000403807 DOT1LQ8TEK3 1739 aa18.09■□□□□ 0.49
VPREB1-202ENST00000403807 TEFQ10587 303 aa18.08■□□□□ 0.48
VPREB1-202ENST00000403807 PROM2Q8N271 834 aa18.08■□□□□ 0.48
VPREB1-202ENST00000403807 CCER2I3L3R5 266 aa18.07■□□□□ 0.48
VPREB1-202ENST00000403807 TMPOP42166 694 aaKnown RBP18.07■□□□□ 0.48
VPREB1-202ENST00000403807 RIPK4P57078 832 aa18.07■□□□□ 0.48
VPREB1-202ENST00000403807 HMGB2P26583 209 aaKnown RBP18.06■□□□□ 0.48
VPREB1-202ENST00000403807 SLC27A3Q5K4L6 730 aa18.06■□□□□ 0.48
VPREB1-202ENST00000403807 ATG3Q9NT62 314 aa18.06■□□□□ 0.48
VPREB1-202ENST00000403807 ASAP1Q9ULH1 1129 aa18.06■□□□□ 0.48
VPREB1-202ENST00000403807 NBPF14Q5TI25 921 aa18.05■□□□□ 0.48
VPREB1-202ENST00000403807 MCM10Q7L590 875 aa18.05■□□□□ 0.48
VPREB1-202ENST00000403807 BTAF1O14981 1849 aa18.05■□□□□ 0.48
VPREB1-202ENST00000403807 PALLDQ8WX93 1383 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms