RNA–Protein interactions for RNA: ENST00000403538.1

TPT1P4-201, Transcript of tumor protein, translationally-controlled 1 pseudogene 4, humanhuman

BASIC

Gene TPT1P4, Length 519 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1P4-201ENST00000403538 PLEKHG3A1L390 1219 aa12.15□□□□□ -0.46
TPT1P4-201ENST00000403538 MTHFSP49914 203 aa12.15□□□□□ -0.46
TPT1P4-201ENST00000403538 TXNDC2Q86VQ3 553 aa12.15□□□□□ -0.46
TPT1P4-201ENST00000403538 DUSP27Q5VZP5 1158 aa12.14□□□□□ -0.47
TPT1P4-201ENST00000403538 BCL2L12Q9HB09 334 aa12.14□□□□□ -0.47
TPT1P4-201ENST00000403538 AKAP12Q02952 1782 aa12.13□□□□□ -0.47
TPT1P4-201ENST00000403538 DSG2Q14126 1118 aa12.13□□□□□ -0.47
TPT1P4-201ENST00000403538 CABP1Q9NZU7 370 aa12.13□□□□□ -0.47
TPT1P4-201ENST00000403538 MON2Q7Z3U7 1717 aa12.13□□□□□ -0.47
TPT1P4-201ENST00000403538 PLEKHH1Q9ULM0 1364 aa12.13□□□□□ -0.47
TPT1P4-201ENST00000403538 NKTRP30414 1462 aaKnown RBP12.13□□□□□ -0.47
TPT1P4-201ENST00000403538 ZNF142P52746 1687 aaPredicted RBP12.13□□□□□ -0.47
TPT1P4-201ENST00000403538 NUDT16Q96DE0 195 aaKnown RBP12.12□□□□□ -0.47
TPT1P4-201ENST00000403538 IL16Q14005 1332 aa12.11□□□□□ -0.47
TPT1P4-201ENST00000403538 PPIP5K1Q6PFW1 1433 aa12.11□□□□□ -0.47
TPT1P4-201ENST00000403538 ADAMTSL3P82987 1691 aa12.11□□□□□ -0.47
TPT1P4-201ENST00000403538 IQSEC2Q5JU85 1478 aa12.11□□□□□ -0.47
TPT1P4-201ENST00000403538 APAF1O14727 1248 aa12.11□□□□□ -0.47
TPT1P4-201ENST00000403538 FCHSD2O94868 740 aa12.11□□□□□ -0.47
TPT1P4-201ENST00000403538 ANKARQ7Z5J8 1434 aa12.11□□□□□ -0.47
TPT1P4-201ENST00000403538 RIMS1Q86UR5 1692 aaKnown RBP12.1□□□□□ -0.47
TPT1P4-201ENST00000403538 CEP170BQ9Y4F5 1589 aaPredicted RBP12.1□□□□□ -0.47
TPT1P4-201ENST00000403538 COL3A1P02461 1466 aaPredicted RBP12.1□□□□□ -0.47
TPT1P4-201ENST00000403538 LTKP29376 864 aa12.1□□□□□ -0.47
TPT1P4-201ENST00000403538 SAFB2Q14151 953 aaKnown RBP eCLIP12.1□□□□□ -0.47
TPT1P4-201ENST00000403538 WAPLQ7Z5K2 1190 aa12.1□□□□□ -0.47
TPT1P4-201ENST00000403538 WWC1Q8IX03 1113 aa12.1□□□□□ -0.47
TPT1P4-201ENST00000403538 OXER1Q8TDS5 423 aa12.1□□□□□ -0.47
TPT1P4-201ENST00000403538 ITSN1Q15811 1721 aa12.1□□□□□ -0.47
TPT1P4-201ENST00000403538 TOPAZ1Q8N9V7 1692 aa12.1□□□□□ -0.47
TPT1P4-201ENST00000403538 TTC21AQ8NDW8 1320 aa12.09□□□□□ -0.47
TPT1P4-201ENST00000403538 XRN1Q8IZH2 1706 aaKnown RBP12.08□□□□□ -0.47
TPT1P4-201ENST00000403538 CDK12Q9NYV4 1490 aaPredicted RBP12.08□□□□□ -0.47
TPT1P4-201ENST00000403538 ROBO2Q9HCK4 1378 aa12.08□□□□□ -0.48
TPT1P4-201ENST00000403538 LRRC7Q96NW7 1537 aa12.08□□□□□ -0.48
TPT1P4-201ENST00000403538 GOLGA8CPA6NN73 597 aa12.08□□□□□ -0.48
TPT1P4-201ENST00000403538 DIAPH1O60610 1272 aaKnown RBP12.08□□□□□ -0.48
TPT1P4-201ENST00000403538 WNT2BQ93097 391 aa12.08□□□□□ -0.48
TPT1P4-201ENST00000403538 ZNF428Q96B54 188 aa12.08□□□□□ -0.48
TPT1P4-201ENST00000403538 CDCA7LQ96GN5 454 aa12.08□□□□□ -0.48
TPT1P4-201ENST00000403538 MYH16Q9H6N6 1097 aa12.08□□□□□ -0.48
TPT1P4-201ENST00000403538 NEFMP07197 916 aa12.07□□□□□ -0.48
TPT1P4-201ENST00000403538 PDE3AQ14432 1141 aa12.07□□□□□ -0.48
TPT1P4-201ENST00000403538 TCP11L2Q8N4U5 519 aa12.07□□□□□ -0.48
TPT1P4-201ENST00000403538 ZNF454Q8N9F8 522 aa12.07□□□□□ -0.48
TPT1P4-201ENST00000403538 BCANQ96GW7 911 aa12.07□□□□□ -0.48
TPT1P4-201ENST00000403538 CCDC136Q96JN2 1154 aa12.07□□□□□ -0.48
TPT1P4-201ENST00000403538 ZBED2Q9BTP6 218 aa12.07□□□□□ -0.48
TPT1P4-201ENST00000403538 DNAJC5Q9H3Z4 198 aa12.07□□□□□ -0.48
TPT1P4-201ENST00000403538 MAP2P11137 1827 aaKnown RBP12.07□□□□□ -0.48
TPT1P4-201ENST00000403538 KIF24Q5T7B8 1368 aa12.06□□□□□ -0.48
TPT1P4-201ENST00000403538 MS4A1P11836 297 aa12.06□□□□□ -0.48
TPT1P4-201ENST00000403538 CALD1Q05682 793 aaKnown RBP12.06□□□□□ -0.48
TPT1P4-201ENST00000403538 ANKLE2Q86XL3 938 aa12.06□□□□□ -0.48
TPT1P4-201ENST00000403538 MRPL50Q8N5N7 158 aaKnown RBP12.06□□□□□ -0.48
TPT1P4-201ENST00000403538 COG3Q96JB2 828 aa12.06□□□□□ -0.48
TPT1P4-201ENST00000403538 TSHZ2Q9NRE2 1034 aa12.06□□□□□ -0.48
TPT1P4-201ENST00000403538 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.06□□□□□ -0.48
TPT1P4-201ENST00000403538 U2AF1L5P0DN76 240 aaPredicted RBP12.05□□□□□ -0.48
TPT1P4-201ENST00000403538 PTPREP23469 700 aa12.05□□□□□ -0.48
TPT1P4-201ENST00000403538 U2AF1Q01081 240 aaKnown RBP eCLIP12.05□□□□□ -0.48
TPT1P4-201ENST00000403538 PLEKHF1Q96S99 279 aa12.05□□□□□ -0.48
TPT1P4-201ENST00000403538 GGNBP2Q9H3C7 697 aa12.05□□□□□ -0.48
TPT1P4-201ENST00000403538 AMOTL2Q9Y2J4 779 aa12.05□□□□□ -0.48
TPT1P4-201ENST00000403538 FOSBP53539 338 aa12.04□□□□□ -0.48
TPT1P4-201ENST00000403538 POLKQ9UBT6 870 aa12.04□□□□□ -0.48
TPT1P4-201ENST00000403538 MAPK8IP3Q9UPT6 1336 aa12.04□□□□□ -0.48
TPT1P4-201ENST00000403538 USP31Q70CQ4 1352 aa12.04□□□□□ -0.48
TPT1P4-201ENST00000403538 SSH2Q76I76 1423 aa12.03□□□□□ -0.48
TPT1P4-201ENST00000403538 PTPRUQ92729 1446 aa12.03□□□□□ -0.48
TPT1P4-201ENST00000403538 CHD2O14647 1828 aaKnown RBP12.03□□□□□ -0.48
TPT1P4-201ENST00000403538 CEBPAP49715 358 aaPredicted RBP12.03□□□□□ -0.48
TPT1P4-201ENST00000403538 NRKQ7Z2Y5 1582 aa12.03□□□□□ -0.48
TPT1P4-201ENST00000403538 USP6P35125 1406 aa12.03□□□□□ -0.48
TPT1P4-201ENST00000403538 LMOD3Q0VAK6 560 aa12.02□□□□□ -0.49
TPT1P4-201ENST00000403538 SALL2Q9Y467 1007 aaPredicted RBP12.02□□□□□ -0.49
TPT1P4-201ENST00000403538 USP54Q70EL1 1684 aa12.02□□□□□ -0.49
TPT1P4-201ENST00000403538 NALCNQ8IZF0 1738 aa12.01□□□□□ -0.49
TPT1P4-201ENST00000403538 ITGBL1O95965 494 aaPredicted RBP12.01□□□□□ -0.49
TPT1P4-201ENST00000403538 CCDC146Q8IYE0 955 aa12.01□□□□□ -0.49
TPT1P4-201ENST00000403538 TTC21BQ7Z4L5 1316 aa12.01□□□□□ -0.49
TPT1P4-201ENST00000403538 TMPOP42166 694 aaKnown RBP12□□□□□ -0.49
TPT1P4-201ENST00000403538 TNNT2P45379 298 aaPredicted RBP12□□□□□ -0.49
TPT1P4-201ENST00000403538 IRX6P78412 446 aaPredicted RBP12□□□□□ -0.49
TPT1P4-201ENST00000403538 NBPF3Q9H094 633 aa12□□□□□ -0.49
TPT1P4-201ENST00000403538 ANO8Q9HCE9 1232 aaPredicted RBP12□□□□□ -0.49
TPT1P4-201ENST00000403538 PRR36Q9H6K5 1346 aa12□□□□□ -0.49
TPT1P4-201ENST00000403538 OVOS2A0A0J9YW53 1432 aa12□□□□□ -0.49
TPT1P4-201ENST00000403538 OVOS2Q6IE36 1432 aa12□□□□□ -0.49
TPT1P4-201ENST00000403538 TCERG1O14776 1098 aaKnown RBP11.99□□□□□ -0.49
TPT1P4-201ENST00000403538 HAP1P54257 671 aaPredicted RBP11.99□□□□□ -0.49
TPT1P4-201ENST00000403538 BRPF1P55201 1214 aaPredicted RBP11.99□□□□□ -0.49
TPT1P4-201ENST00000403538 ACEP12821 1306 aa11.99□□□□□ -0.49
TPT1P4-201ENST00000403538 FMN2Q9NZ56 1722 aa11.98□□□□□ -0.49
TPT1P4-201ENST00000403538 NCOA3Q9Y6Q9 1424 aa11.98□□□□□ -0.49
TPT1P4-201ENST00000403538 IL13P35225 146 aa11.98□□□□□ -0.49
TPT1P4-201ENST00000403538 B4GALNT3Q6L9W6 998 aa11.98□□□□□ -0.49
TPT1P4-201ENST00000403538 HS6ST3Q8IZP7 471 aa11.98□□□□□ -0.49
TPT1P4-201ENST00000403538 SLC26A8Q96RN1 970 aa11.97□□□□□ -0.49
TPT1P4-201ENST00000403538 RSPH6AQ9H0K4 717 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms