RNA–Protein interactions for RNA: ENST00000402718.4

COMMD5-202, Transcript of COMM domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD5, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD5-202ENST00000402718 BCL9O00512 1426 aa22.48■■□□□ 1.19
COMMD5-202ENST00000402718 PCDH11XQ9BZA7 1347 aa22.46■■□□□ 1.19
COMMD5-202ENST00000402718 PCDH11YQ9BZA8 1340 aa22.46■■□□□ 1.19
COMMD5-202ENST00000402718 SULT6B1Q6IMI4 303 aa22.46■■□□□ 1.19
COMMD5-202ENST00000402718 SPG7Q9UQ90 795 aa22.46■■□□□ 1.19
COMMD5-202ENST00000402718 COL3A1P02461 1466 aaPredicted RBP22.46■■□□□ 1.19
COMMD5-202ENST00000402718 PLEKHG2Q9H7P9 1386 aa22.45■■□□□ 1.18
COMMD5-202ENST00000402718 PRKRIP1Q9H875 184 aaPredicted RBP22.45■■□□□ 1.18
COMMD5-202ENST00000402718 U2SURPO15042 1029 aaKnown RBP22.44■■□□□ 1.18
COMMD5-202ENST00000402718 BAG6P46379 1132 aa22.44■■□□□ 1.18
COMMD5-202ENST00000402718 AEBP1Q8IUX7 1158 aa22.44■■□□□ 1.18
COMMD5-202ENST00000402718 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.44■■□□□ 1.18
COMMD5-202ENST00000402718 NUDCQ9Y266 331 aa22.43■■□□□ 1.18
COMMD5-202ENST00000402718 RGPD1P0DJD0 1748 aa22.43■■□□□ 1.18
COMMD5-202ENST00000402718 KDRP35968 1356 aa22.42■■□□□ 1.18
COMMD5-202ENST00000402718 HMOX1P09601 288 aa22.41■■□□□ 1.18
COMMD5-202ENST00000402718 BCL11BQ9C0K0 894 aaPredicted RBP22.41■■□□□ 1.18
COMMD5-202ENST00000402718 MYBBP1AQ9BQG0 1328 aaKnown RBP22.41■■□□□ 1.18
COMMD5-202ENST00000402718 APBA3O96018 575 aa22.4■■□□□ 1.18
COMMD5-202ENST00000402718 PLEKHO1Q53GL0 409 aaPredicted RBP22.4■■□□□ 1.18
COMMD5-202ENST00000402718 DEFB132Q7Z7B7 95 aa22.4■■□□□ 1.18
COMMD5-202ENST00000402718 ACSBG1Q96GR2 724 aa22.4■■□□□ 1.18
COMMD5-202ENST00000402718 EP400Q96L91 3159 aa22.39■■□□□ 1.18
COMMD5-202ENST00000402718 AMOTQ4VCS5 1084 aa22.39■■□□□ 1.18
COMMD5-202ENST00000402718 PKD1L3Q7Z443 1732 aa22.38■■□□□ 1.17
COMMD5-202ENST00000402718 CYP27B1O15528 508 aa22.38■■□□□ 1.17
COMMD5-202ENST00000402718 SHANK3Q9BYB0 1731 aa22.38■■□□□ 1.17
COMMD5-202ENST00000402718 TNS1Q9HBL0 1735 aaKnown RBP22.37■■□□□ 1.17
COMMD5-202ENST00000402718 KCNQ2O43526 872 aa22.36■■□□□ 1.17
COMMD5-202ENST00000402718 IFNL2Q8IZJ0 200 aa22.36■■□□□ 1.17
COMMD5-202ENST00000402718 ANP32CO43423 234 aa22.35■■□□□ 1.17
COMMD5-202ENST00000402718 EN1Q05925 392 aaPredicted RBP22.35■■□□□ 1.17
COMMD5-202ENST00000402718 SYTL4Q96C24 671 aaPredicted RBP22.35■■□□□ 1.17
COMMD5-202ENST00000402718 U2AF1L5P0DN76 240 aaPredicted RBP22.34■■□□□ 1.17
COMMD5-202ENST00000402718 PHKG2P15735 406 aa22.34■■□□□ 1.17
COMMD5-202ENST00000402718 U2AF1Q01081 240 aaKnown RBP eCLIP22.34■■□□□ 1.17
COMMD5-202ENST00000402718 DIEXFQ68CQ4 756 aaKnown RBP22.34■■□□□ 1.17
COMMD5-202ENST00000402718 ZNF530Q6P9A1 599 aaPredicted RBP22.34■■□□□ 1.17
COMMD5-202ENST00000402718 PTF1AQ7RTS3 328 aa22.34■■□□□ 1.17
COMMD5-202ENST00000402718 NHSQ6T4R5 1651 aa22.33■■□□□ 1.17
COMMD5-202ENST00000402718 PRIM1P49642 420 aaKnown RBP22.32■■□□□ 1.16
COMMD5-202ENST00000402718 NKX1-1Q15270 411 aaPredicted RBP22.32■■□□□ 1.16
COMMD5-202ENST00000402718 C1orf141Q5JVX7 400 aa22.32■■□□□ 1.16
COMMD5-202ENST00000402718 SBF2Q86WG5 1849 aa22.32■■□□□ 1.16
COMMD5-202ENST00000402718 HSP90AB1P08238 724 aaKnown RBP22.31■■□□□ 1.16
COMMD5-202ENST00000402718 EZH2Q15910 746 aaKnown RBP22.31■■□□□ 1.16
COMMD5-202ENST00000402718 CAMKK2Q96RR4 588 aa22.31■■□□□ 1.16
COMMD5-202ENST00000402718 PLSCR1O15162 318 aa22.3■■□□□ 1.16
COMMD5-202ENST00000402718 DOT1LQ8TEK3 1739 aa22.29■■□□□ 1.16
COMMD5-202ENST00000402718 PRKAR2BP31323 418 aa22.29■■□□□ 1.16
COMMD5-202ENST00000402718 RSPH6AQ9H0K4 717 aa22.29■■□□□ 1.16
COMMD5-202ENST00000402718 FCHSD2O94868 740 aa22.28■■□□□ 1.16
COMMD5-202ENST00000402718 AKAP4Q5JQC9 854 aa22.27■■□□□ 1.16
COMMD5-202ENST00000402718 DCAF5Q96JK2 942 aa22.27■■□□□ 1.16
COMMD5-202ENST00000402718 MTHFSDQ2M296 383 aaKnown RBP22.26■■□□□ 1.15
COMMD5-202ENST00000402718 MPRIPQ6WCQ1 1025 aa22.25■■□□□ 1.15
COMMD5-202ENST00000402718 GAS2L2Q8NHY3 880 aa22.25■■□□□ 1.15
COMMD5-202ENST00000402718 NEFMP07197 916 aa22.24■■□□□ 1.15
COMMD5-202ENST00000402718 TMOD3Q9NYL9 352 aa22.24■■□□□ 1.15
COMMD5-202ENST00000402718 PNNQ9H307 717 aaKnown RBP22.23■■□□□ 1.15
COMMD5-202ENST00000402718 KDM6AO15550 1401 aaPredicted RBP22.22■■□□□ 1.15
COMMD5-202ENST00000402718 TOGARAM1Q9Y4F4 1720 aa22.22■■□□□ 1.15
COMMD5-202ENST00000402718 ERVV-2B6SEH9 535 aa22.22■■□□□ 1.15
COMMD5-202ENST00000402718 WDR43Q15061 677 aaKnown RBP eCLIP22.22■■□□□ 1.15
COMMD5-202ENST00000402718 TXNRD1Q16881 649 aa22.22■■□□□ 1.15
COMMD5-202ENST00000402718 BTAF1O14981 1849 aa22.22■■□□□ 1.15
COMMD5-202ENST00000402718 RGPD3A6NKT7 1758 aaPredicted RBP22.22■■□□□ 1.15
COMMD5-202ENST00000402718 RGPD4Q7Z3J3 1758 aa22.22■■□□□ 1.15
COMMD5-202ENST00000402718 PHACTR3Q96KR7 559 aa22.21■■□□□ 1.15
COMMD5-202ENST00000402718 CABP4P57796 275 aa22.2■■□□□ 1.14
COMMD5-202ENST00000402718 PIGBQ92521 554 aa22.2■■□□□ 1.14
COMMD5-202ENST00000402718 MAP3K5Q99683 1374 aa22.19■■□□□ 1.14
COMMD5-202ENST00000402718 GNAT3A8MTJ3 354 aa22.18■■□□□ 1.14
COMMD5-202ENST00000402718 PROM2Q8N271 834 aa22.18■■□□□ 1.14
COMMD5-202ENST00000402718 SMARCC1Q92922 1105 aaPredicted RBP22.18■■□□□ 1.14
COMMD5-202ENST00000402718 RREB1Q92766 1687 aa22.18■■□□□ 1.14
COMMD5-202ENST00000402718 MAPK8IP3Q9UPT6 1336 aa22.18■■□□□ 1.14
COMMD5-202ENST00000402718 CCDC184Q52MB2 194 aa22.17■■□□□ 1.14
COMMD5-202ENST00000402718 NBPF14Q5TI25 921 aa22.17■■□□□ 1.14
COMMD5-202ENST00000402718 PALLDQ8WX93 1383 aa22.16■■□□□ 1.14
COMMD5-202ENST00000402718 RNMTO43148 476 aaKnown RBP22.16■■□□□ 1.14
COMMD5-202ENST00000402718 SLC27A3Q5K4L6 730 aa22.16■■□□□ 1.14
COMMD5-202ENST00000402718 PLEKHF1Q96S99 279 aa22.15■■□□□ 1.14
COMMD5-202ENST00000402718 LGR6Q9HBX8 967 aa22.15■■□□□ 1.14
COMMD5-202ENST00000402718 KAT6BQ8WYB5 2073 aa22.15■■□□□ 1.14
COMMD5-202ENST00000402718 CCER2I3L3R5 266 aa22.14■■□□□ 1.14
COMMD5-202ENST00000402718 NUP188Q5SRE5 1749 aa22.13■■□□□ 1.13
COMMD5-202ENST00000402718 MIER1Q8N108 512 aa22.13■■□□□ 1.13
COMMD5-202ENST00000402718 NFATC2IPQ8NCF5 419 aa22.13■■□□□ 1.13
COMMD5-202ENST00000402718 SLC52A2Q9HAB3 445 aa22.13■■□□□ 1.13
COMMD5-202ENST00000402718 CCNL1Q9UK58 526 aaPredicted RBP22.13■■□□□ 1.13
COMMD5-202ENST00000402718 ITGB4P16144 1822 aa22.12■■□□□ 1.13
COMMD5-202ENST00000402718 RTF1Q92541 710 aaKnown RBP22.12■■□□□ 1.13
COMMD5-202ENST00000402718 ASAP1Q9ULH1 1129 aa22.12■■□□□ 1.13
COMMD5-202ENST00000402718 MRS2Q9HD23 443 aa22.11■■□□□ 1.13
COMMD5-202ENST00000402718 ATG3Q9NT62 314 aa22.11■■□□□ 1.13
COMMD5-202ENST00000402718 LRRC4BQ9NT99 713 aa22.11■■□□□ 1.13
COMMD5-202ENST00000402718 ADAMTS8Q9UP79 889 aa22.11■■□□□ 1.13
COMMD5-202ENST00000402718 TEFQ10587 303 aa22.1■■□□□ 1.13
COMMD5-202ENST00000402718 R3HDM1Q15032 1099 aaKnown RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms