RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 MSH6P52701 1360 aa13.75□□□□□ -0.21
SCFD2-202ENST00000401642 ARHGAP45Q92619 1136 aa13.75□□□□□ -0.21
SCFD2-202ENST00000401642 CDC45O75419 566 aa13.74□□□□□ -0.21
SCFD2-202ENST00000401642 PPP6R1Q9UPN7 881 aa13.74□□□□□ -0.21
SCFD2-202ENST00000401642 CHL1O00533 1208 aa13.74□□□□□ -0.21
SCFD2-202ENST00000401642 ANXA1P04083 346 aa13.74□□□□□ -0.21
SCFD2-202ENST00000401642 FOXD4L6Q3SYB3 417 aaPredicted RBP13.74□□□□□ -0.21
SCFD2-202ENST00000401642 FOXD4L3Q6VB84 417 aaPredicted RBP13.74□□□□□ -0.21
SCFD2-202ENST00000401642 MED14O60244 1454 aa13.74□□□□□ -0.21
SCFD2-202ENST00000401642 CEP85Q6P2H3 762 aa13.73□□□□□ -0.21
SCFD2-202ENST00000401642 TNPO1Q92973 898 aaKnown RBP13.73□□□□□ -0.21
SCFD2-202ENST00000401642 STK31Q9BXU1 1019 aa13.73□□□□□ -0.21
SCFD2-202ENST00000401642 GOLGA6L3A6NEY3 463 aa13.73□□□□□ -0.21
SCFD2-202ENST00000401642 RILPL2Q969X0 211 aa13.73□□□□□ -0.21
SCFD2-202ENST00000401642 MAP4K4O95819 1239 aaPredicted RBP13.73□□□□□ -0.21
SCFD2-202ENST00000401642 SSFA2P28290 1259 aa13.73□□□□□ -0.21
SCFD2-202ENST00000401642 GAS2L2Q8NHY3 880 aa13.73□□□□□ -0.21
SCFD2-202ENST00000401642 CHAMP1Q96JM3 812 aa13.73□□□□□ -0.21
SCFD2-202ENST00000401642 TRIM6-TRIM34B2RNG4 842 aa13.72□□□□□ -0.21
SCFD2-202ENST00000401642 KCNA6P17658 529 aa13.72□□□□□ -0.21
SCFD2-202ENST00000401642 SDSP20132 328 aa13.72□□□□□ -0.21
SCFD2-202ENST00000401642 KIF2CQ99661 725 aa13.71□□□□□ -0.21
SCFD2-202ENST00000401642 IL1RAPL2Q9NP60 686 aa13.71□□□□□ -0.21
SCFD2-202ENST00000401642 RIMBP3CA6NJZ7 1639 aa13.71□□□□□ -0.21
SCFD2-202ENST00000401642 RIMBP3BA6NNM3 1639 aa13.71□□□□□ -0.21
SCFD2-202ENST00000401642 RIMBP3Q9UFD9 1639 aa13.71□□□□□ -0.21
SCFD2-202ENST00000401642 DCTPP1Q9H773 170 aa13.71□□□□□ -0.21
SCFD2-202ENST00000401642 DTNBO60941 627 aa13.71□□□□□ -0.22
SCFD2-202ENST00000401642 GLIPR1L2Q4G1C9 344 aa13.71□□□□□ -0.22
SCFD2-202ENST00000401642 DIP2BQ9P265 1576 aa13.71□□□□□ -0.22
SCFD2-202ENST00000401642 RBM25P49756 843 aaKnown RBP13.7□□□□□ -0.22
SCFD2-202ENST00000401642 ANKRD44Q8N8A2 993 aa13.7□□□□□ -0.22
SCFD2-202ENST00000401642 CDK12Q9NYV4 1490 aaPredicted RBP13.7□□□□□ -0.22
SCFD2-202ENST00000401642 KIF20BQ96Q89 1820 aa13.7□□□□□ -0.22
SCFD2-202ENST00000401642 K7ELQ4 463 aaPredicted RBP13.69□□□□□ -0.22
SCFD2-202ENST00000401642 TTC22Q5TAA0 569 aa13.69□□□□□ -0.22
SCFD2-202ENST00000401642 AATKQ6ZMQ8 1374 aa13.69□□□□□ -0.22
SCFD2-202ENST00000401642 XRCC6P12956 609 aaKnown RBP eCLIP13.69□□□□□ -0.22
SCFD2-202ENST00000401642 INTS3Q68E01 1043 aaKnown RBP13.69□□□□□ -0.22
SCFD2-202ENST00000401642 PHAXQ9H814 394 aaKnown RBP13.68□□□□□ -0.22
SCFD2-202ENST00000401642 PTCH1Q13635 1447 aa13.68□□□□□ -0.22
SCFD2-202ENST00000401642 PLEKHG3A1L390 1219 aa13.68□□□□□ -0.22
SCFD2-202ENST00000401642 BRPF1P55201 1214 aaPredicted RBP13.68□□□□□ -0.22
SCFD2-202ENST00000401642 PKP1Q13835 747 aa13.68□□□□□ -0.22
SCFD2-202ENST00000401642 PNMA6EA0A0J9YXQ4 647 aa13.67□□□□□ -0.22
SCFD2-202ENST00000401642 FLIIQ13045 1269 aa13.67□□□□□ -0.22
SCFD2-202ENST00000401642 ESCO1Q5FWF5 840 aa13.67□□□□□ -0.22
SCFD2-202ENST00000401642 LRRC59Q96AG4 307 aaKnown RBP13.67□□□□□ -0.22
SCFD2-202ENST00000401642 LRRFIP2Q9Y608 721 aaKnown RBP13.67□□□□□ -0.22
SCFD2-202ENST00000401642 USP6P35125 1406 aa13.66□□□□□ -0.22
SCFD2-202ENST00000401642 RTL1A6NKG5 1358 aa13.66□□□□□ -0.22
SCFD2-202ENST00000401642 CASC1Q6TDU7 716 aa13.66□□□□□ -0.22
SCFD2-202ENST00000401642 NUTM1Q86Y26 1132 aa13.66□□□□□ -0.22
SCFD2-202ENST00000401642 RPAP2Q8IXW5 612 aaPredicted RBP13.66□□□□□ -0.22
SCFD2-202ENST00000401642 SETD1BQ9UPS6 1966 aaKnown RBP13.66□□□□□ -0.22
SCFD2-202ENST00000401642 PIK3R4Q99570 1358 aa13.66□□□□□ -0.22
SCFD2-202ENST00000401642 MCTP1Q6DN14 999 aa13.66□□□□□ -0.22
SCFD2-202ENST00000401642 ZGPATQ8N5A5 531 aaKnown RBP13.66□□□□□ -0.22
SCFD2-202ENST00000401642 ADAMTS13Q76LX8 1427 aa13.66□□□□□ -0.22
SCFD2-202ENST00000401642 PTPRUQ92729 1446 aa13.66□□□□□ -0.22
SCFD2-202ENST00000401642 GNAT3A8MTJ3 354 aa13.65□□□□□ -0.22
SCFD2-202ENST00000401642 HMMRO75330 724 aa13.65□□□□□ -0.22
SCFD2-202ENST00000401642 L1TD1Q5T7N2 865 aaKnown RBP13.65□□□□□ -0.22
SCFD2-202ENST00000401642 HDGFL1Q5TGJ6 251 aa13.65□□□□□ -0.22
SCFD2-202ENST00000401642 SPATA31D1Q6ZQQ2 1576 aa13.65□□□□□ -0.22
SCFD2-202ENST00000401642 IL17REQ8NFR9 667 aa13.65□□□□□ -0.22
SCFD2-202ENST00000401642 LARP6Q9BRS8 491 aaKnown RBP13.65□□□□□ -0.22
SCFD2-202ENST00000401642 KCNQ3O43525 872 aa13.65□□□□□ -0.22
SCFD2-202ENST00000401642 GNAI2P04899 355 aa13.65□□□□□ -0.22
SCFD2-202ENST00000401642 HAP1P54257 671 aaPredicted RBP13.65□□□□□ -0.22
SCFD2-202ENST00000401642 GBP4Q96PP9 640 aa13.65□□□□□ -0.22
SCFD2-202ENST00000401642 ANO2Q9NQ90 1003 aa13.65□□□□□ -0.22
SCFD2-202ENST00000401642 PSME1Q06323 249 aa13.65□□□□□ -0.23
SCFD2-202ENST00000401642 MPRIPQ6WCQ1 1025 aa13.65□□□□□ -0.23
SCFD2-202ENST00000401642 LGR6Q9HBX8 967 aa13.65□□□□□ -0.23
SCFD2-202ENST00000401642 HOXC9P31274 260 aa13.64□□□□□ -0.23
SCFD2-202ENST00000401642 DLC1Q96QB1 1528 aa13.64□□□□□ -0.23
SCFD2-202ENST00000401642 DDX11L8A8MPP1 907 aa13.64□□□□□ -0.23
SCFD2-202ENST00000401642 DDX49Q9Y6V7 483 aaKnown RBP13.64□□□□□ -0.23
SCFD2-202ENST00000401642 ANKRD26Q9UPS8 1709 aa13.64□□□□□ -0.23
SCFD2-202ENST00000401642 VIRMAQ69YN4 1812 aaKnown RBP13.63□□□□□ -0.23
SCFD2-202ENST00000401642 CDC42BPGQ6DT37 1551 aa13.63□□□□□ -0.23
SCFD2-202ENST00000401642 THEMISQ8N1K5 641 aaPredicted RBP13.63□□□□□ -0.23
SCFD2-202ENST00000401642 USP26Q9BXU7 913 aa13.63□□□□□ -0.23
SCFD2-202ENST00000401642 NEK4P51957 841 aa13.63□□□□□ -0.23
SCFD2-202ENST00000401642 UPF3BQ9BZI7 483 aaKnown RBP13.63□□□□□ -0.23
SCFD2-202ENST00000401642 PDE1AP54750 535 aa13.63□□□□□ -0.23
SCFD2-202ENST00000401642 CCDC30Q5VVM6 783 aa13.63□□□□□ -0.23
SCFD2-202ENST00000401642 SNX21Q969T3 373 aa13.63□□□□□ -0.23
SCFD2-202ENST00000401642 FLT4P35916 1363 aa13.63□□□□□ -0.23
SCFD2-202ENST00000401642 SURF6O75683 361 aaKnown RBP13.62□□□□□ -0.23
SCFD2-202ENST00000401642 RRAGDQ9NQL2 400 aaPredicted RBP13.62□□□□□ -0.23
SCFD2-202ENST00000401642 NRXN3Q9Y4C0 1643 aa13.62□□□□□ -0.23
SCFD2-202ENST00000401642 PTPRCP08575 1304 aa13.62□□□□□ -0.23
SCFD2-202ENST00000401642 OS9Q13438 667 aaPredicted RBP13.62□□□□□ -0.23
SCFD2-202ENST00000401642 GAS2L3Q86XJ1 694 aa13.62□□□□□ -0.23
SCFD2-202ENST00000401642 CCT4P50991 539 aaKnown RBP13.61□□□□□ -0.23
SCFD2-202ENST00000401642 DLG5Q8TDM6 1919 aa13.61□□□□□ -0.23
SCFD2-202ENST00000401642 UBTFL1P0CB47 393 aaPredicted RBP13.61□□□□□ -0.23
SCFD2-202ENST00000401642 AIMP1Q12904 312 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms