RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 GCP02774 474 aa15.69■□□□□ 0.1
CLIP4-203ENST00000401617 PCDHB15Q9Y5E8 787 aa15.69■□□□□ 0.1
CLIP4-203ENST00000401617 NCAPD2Q15021 1401 aa15.68■□□□□ 0.1
CLIP4-203ENST00000401617 RGPD2P0DJD1 1756 aa15.68■□□□□ 0.1
CLIP4-203ENST00000401617 XPCQ01831 940 aaPredicted RBP15.68■□□□□ 0.1
CLIP4-203ENST00000401617 DDX19BQ9UMR2 479 aa15.68■□□□□ 0.1
CLIP4-203ENST00000401617 CADPS2Q86UW7 1296 aa15.66■□□□□ 0.1
CLIP4-203ENST00000401617 SKAP1Q86WV1 359 aa15.66■□□□□ 0.1
CLIP4-203ENST00000401617 CAMTA1Q9Y6Y1 1673 aa15.66■□□□□ 0.1
CLIP4-203ENST00000401617 MSH6P52701 1360 aa15.66■□□□□ 0.1
CLIP4-203ENST00000401617 TMEM57Q8N5G2 664 aa15.66■□□□□ 0.1
CLIP4-203ENST00000401617 HAP1P54257 671 aaPredicted RBP15.65■□□□□ 0.1
CLIP4-203ENST00000401617 RTF1Q92541 710 aaKnown RBP15.65■□□□□ 0.1
CLIP4-203ENST00000401617 LTV1Q96GA3 475 aaPredicted RBP15.65■□□□□ 0.1
CLIP4-203ENST00000401617 BACH2Q9BYV9 841 aa15.65■□□□□ 0.1
CLIP4-203ENST00000401617 MED1Q15648 1581 aaPredicted RBP15.65■□□□□ 0.1
CLIP4-203ENST00000401617 PDE4AP27815 886 aa15.65■□□□□ 0.1
CLIP4-203ENST00000401617 GNAT3A8MTJ3 354 aa15.64■□□□□ 0.09
CLIP4-203ENST00000401617 ELL2O00472 640 aaPredicted RBP15.64■□□□□ 0.09
CLIP4-203ENST00000401617 NBPF6Q5VWK0 638 aa15.64■□□□□ 0.09
CLIP4-203ENST00000401617 NBPF4Q96M43 638 aa15.64■□□□□ 0.09
CLIP4-203ENST00000401617 ZBTB40Q9NUA8 1239 aa15.63■□□□□ 0.09
CLIP4-203ENST00000401617 MAP3K5Q99683 1374 aa15.63■□□□□ 0.09
CLIP4-203ENST00000401617 ITPRIPQ8IWB1 547 aa15.63■□□□□ 0.09
CLIP4-203ENST00000401617 RGPD5Q99666 1765 aa15.63■□□□□ 0.09
CLIP4-203ENST00000401617 ABCC4O15439 1325 aa15.63■□□□□ 0.09
CLIP4-203ENST00000401617 RWDD1Q9H446 243 aaPredicted RBP15.62■□□□□ 0.09
CLIP4-203ENST00000401617 BABAM1Q9NWV8 329 aa15.62■□□□□ 0.09
CLIP4-203ENST00000401617 PXDNQ92626 1479 aa15.62■□□□□ 0.09
CLIP4-203ENST00000401617 NPHP3Q7Z494 1330 aa15.61■□□□□ 0.09
CLIP4-203ENST00000401617 CRYBG1Q9Y4K1 1723 aa15.61■□□□□ 0.09
CLIP4-203ENST00000401617 HDAC1Q13547 482 aaPredicted RBP15.61■□□□□ 0.09
CLIP4-203ENST00000401617 USHBP1Q8N6Y0 703 aa15.61■□□□□ 0.09
CLIP4-203ENST00000401617 LMO7Q8WWI1 1683 aa15.61■□□□□ 0.09
CLIP4-203ENST00000401617 CACNA1FO60840 1977 aa15.61■□□□□ 0.09
CLIP4-203ENST00000401617 COL18A1P39060 1754 aa15.61■□□□□ 0.09
CLIP4-203ENST00000401617 KRT24Q2M2I5 525 aa15.6■□□□□ 0.09
CLIP4-203ENST00000401617 IL17REQ8NFR9 667 aa15.6■□□□□ 0.09
CLIP4-203ENST00000401617 API5Q9BZZ5 524 aaKnown RBP15.6■□□□□ 0.09
CLIP4-203ENST00000401617 CEMIPQ8WUJ3 1361 aa15.6■□□□□ 0.09
CLIP4-203ENST00000401617 TNS3Q68CZ2 1445 aa15.59■□□□□ 0.09
CLIP4-203ENST00000401617 LMOD2Q6P5Q4 547 aa15.59■□□□□ 0.09
CLIP4-203ENST00000401617 TSPYL4Q9UJ04 414 aa15.59■□□□□ 0.09
CLIP4-203ENST00000401617 ZBTB7BO15156 539 aaPredicted RBP15.59■□□□□ 0.09
CLIP4-203ENST00000401617 AXIN2Q9Y2T1 843 aa15.59■□□□□ 0.09
CLIP4-203ENST00000401617 ABCC6O95255 1503 aa15.59■□□□□ 0.09
CLIP4-203ENST00000401617 ANKRD24Q8TF21 1146 aa15.58■□□□□ 0.08
CLIP4-203ENST00000401617 LRRC59Q96AG4 307 aaKnown RBP15.58■□□□□ 0.08
CLIP4-203ENST00000401617 CHMP4BQ9H444 224 aaKnown RBP15.58■□□□□ 0.08
CLIP4-203ENST00000401617 MIS18AQ9NYP9 233 aa15.58■□□□□ 0.08
CLIP4-203ENST00000401617 RGS12O14924 1447 aa15.58■□□□□ 0.08
CLIP4-203ENST00000401617 DDX17Q92841 729 aaKnown RBP15.58■□□□□ 0.08
CLIP4-203ENST00000401617 VIRMAQ69YN4 1812 aaKnown RBP15.57■□□□□ 0.08
CLIP4-203ENST00000401617 SOS1Q07889 1333 aaPredicted RBP15.57■□□□□ 0.08
CLIP4-203ENST00000401617 SPATA31A3Q5VYP0 1347 aa15.57■□□□□ 0.08
CLIP4-203ENST00000401617 ZBTB7CA1YPR0 619 aa15.56■□□□□ 0.08
CLIP4-203ENST00000401617 TAF7Q15545 349 aaPredicted RBP15.56■□□□□ 0.08
CLIP4-203ENST00000401617 RGS3P49796 1198 aa15.55■□□□□ 0.08
CLIP4-203ENST00000401617 AMOTQ4VCS5 1084 aa15.55■□□□□ 0.08
CLIP4-203ENST00000401617 PDZRN3Q9UPQ7 1066 aa15.55■□□□□ 0.08
CLIP4-203ENST00000401617 PTPRCP08575 1304 aa15.55■□□□□ 0.08
CLIP4-203ENST00000401617 ERBB3P21860 1342 aa15.55■□□□□ 0.08
CLIP4-203ENST00000401617 KDM3BQ7LBC6 1761 aa15.55■□□□□ 0.08
CLIP4-203ENST00000401617 MSH5O43196 834 aa15.55■□□□□ 0.08
CLIP4-203ENST00000401617 FAM161AQ3B820 660 aa15.55■□□□□ 0.08
CLIP4-203ENST00000401617 C8orf34Q49A92 452 aa15.55■□□□□ 0.08
CLIP4-203ENST00000401617 PLEKHO1Q53GL0 409 aaPredicted RBP15.55■□□□□ 0.08
CLIP4-203ENST00000401617 INTS3Q68E01 1043 aaKnown RBP15.55■□□□□ 0.08
CLIP4-203ENST00000401617 BRINP3Q76B58 766 aa15.55■□□□□ 0.08
CLIP4-203ENST00000401617 SMC5Q8IY18 1101 aa15.55■□□□□ 0.08
CLIP4-203ENST00000401617 OVOS2A0A0G2JMS6 1433 aa15.54■□□□□ 0.08
CLIP4-203ENST00000401617 ZNF335Q9H4Z2 1342 aaPredicted RBP15.54■□□□□ 0.08
CLIP4-203ENST00000401617 AKAP4Q5JQC9 854 aa15.54■□□□□ 0.08
CLIP4-203ENST00000401617 FAM208AQ9UK61 1670 aaKnown RBP15.54■□□□□ 0.08
CLIP4-203ENST00000401617 ADAMTS7Q9UKP4 1686 aa15.54■□□□□ 0.08
CLIP4-203ENST00000401617 CPDO75976 1380 aa15.53■□□□□ 0.08
CLIP4-203ENST00000401617 ZC3H6P61129 1189 aaKnown RBP15.53■□□□□ 0.08
CLIP4-203ENST00000401617 PLEKHG2Q9H7P9 1386 aa15.51■□□□□ 0.07
CLIP4-203ENST00000401617 SOS2Q07890 1332 aaPredicted RBP15.51■□□□□ 0.07
CLIP4-203ENST00000401617 SLC4A2P04920 1241 aa15.51■□□□□ 0.07
CLIP4-203ENST00000401617 ZNF530Q6P9A1 599 aaPredicted RBP15.51■□□□□ 0.07
CLIP4-203ENST00000401617 SLAIN2Q9P270 581 aa15.51■□□□□ 0.07
CLIP4-203ENST00000401617 SIPA1L3O60292 1781 aaPredicted RBP15.51■□□□□ 0.07
CLIP4-203ENST00000401617 PLEKHG5O94827 1062 aa15.51■□□□□ 0.07
CLIP4-203ENST00000401617 LGR6Q9HBX8 967 aa15.51■□□□□ 0.07
CLIP4-203ENST00000401617 ANP32AP39687 249 aaKnown RBP15.5■□□□□ 0.07
CLIP4-203ENST00000401617 CCDC30Q5VVM6 783 aa15.49■□□□□ 0.07
CLIP4-203ENST00000401617 N4BP2Q86UW6 1770 aaPredicted RBP15.49■□□□□ 0.07
CLIP4-203ENST00000401617 RNMTO43148 476 aaKnown RBP15.48■□□□□ 0.07
CLIP4-203ENST00000401617 CABLES1Q8TDN4 633 aa15.48■□□□□ 0.07
CLIP4-203ENST00000401617 G2E3Q7L622 706 aa15.48■□□□□ 0.07
CLIP4-203ENST00000401617 SIRT2Q8IXJ6 389 aa15.48■□□□□ 0.07
CLIP4-203ENST00000401617 HOXB7P09629 217 aa15.47■□□□□ 0.07
CLIP4-203ENST00000401617 EIF4A1P60842 406 aaKnown RBP15.47■□□□□ 0.07
CLIP4-203ENST00000401617 IPO9Q96P70 1041 aaKnown RBP15.47■□□□□ 0.07
CLIP4-203ENST00000401617 NHSL1Q5SYE7 1610 aa15.47■□□□□ 0.07
CLIP4-203ENST00000401617 C1orf141Q5JVX7 400 aa15.46■□□□□ 0.07
CLIP4-203ENST00000401617 STK31Q9BXU1 1019 aa15.46■□□□□ 0.07
CLIP4-203ENST00000401617 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.46■□□□□ 0.07
CLIP4-203ENST00000401617 SCN11AQ9UI33 1791 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms