RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 WDR17Q8IZU2 1322 aa20.47■□□□□ 0.87
CHRFAM7A-203ENST00000401522 IGSF1Q8N6C5 1336 aa20.47■□□□□ 0.87
CHRFAM7A-203ENST00000401522 EVA1CP58658 441 aa20.46■□□□□ 0.87
CHRFAM7A-203ENST00000401522 PDE3AQ14432 1141 aa20.46■□□□□ 0.87
CHRFAM7A-203ENST00000401522 NBPF6Q5VWK0 638 aa20.46■□□□□ 0.87
CHRFAM7A-203ENST00000401522 SKAP1Q86WV1 359 aa20.46■□□□□ 0.87
CHRFAM7A-203ENST00000401522 NBPF4Q96M43 638 aa20.46■□□□□ 0.87
CHRFAM7A-203ENST00000401522 NWD2Q9ULI1 1742 aa20.46■□□□□ 0.87
CHRFAM7A-203ENST00000401522 MEX3CQ5U5Q3 659 aaKnown RBP20.45■□□□□ 0.86
CHRFAM7A-203ENST00000401522 BCAR3O75815 825 aa20.45■□□□□ 0.86
CHRFAM7A-203ENST00000401522 CSB-PGBD3P0DP91 1061 aa20.45■□□□□ 0.86
CHRFAM7A-203ENST00000401522 FAM208AQ9UK61 1670 aaKnown RBP20.44■□□□□ 0.86
CHRFAM7A-203ENST00000401522 FCHSD2O94868 740 aa20.44■□□□□ 0.86
CHRFAM7A-203ENST00000401522 FAM161AQ3B820 660 aa20.44■□□□□ 0.86
CHRFAM7A-203ENST00000401522 STRN4Q9NRL3 753 aa20.43■□□□□ 0.86
CHRFAM7A-203ENST00000401522 NCAPD2Q15021 1401 aa20.43■□□□□ 0.86
CHRFAM7A-203ENST00000401522 KDRP35968 1356 aa20.43■□□□□ 0.86
CHRFAM7A-203ENST00000401522 NCBP3Q53F19 620 aaKnown RBP20.43■□□□□ 0.86
CHRFAM7A-203ENST00000401522 SULT6B1Q6IMI4 303 aa20.43■□□□□ 0.86
CHRFAM7A-203ENST00000401522 LARP1Q6PKG0 1096 aaKnown RBP20.43■□□□□ 0.86
CHRFAM7A-203ENST00000401522 NLRP2Q9NX02 1062 aa20.43■□□□□ 0.86
CHRFAM7A-203ENST00000401522 BCL9LQ86UU0 1499 aa20.42■□□□□ 0.86
CHRFAM7A-203ENST00000401522 UNC5CLQ8IV45 518 aa20.42■□□□□ 0.86
CHRFAM7A-203ENST00000401522 PHF23Q9BUL5 403 aaPredicted RBP20.42■□□□□ 0.86
CHRFAM7A-203ENST00000401522 RGPD2P0DJD1 1756 aa20.42■□□□□ 0.86
CHRFAM7A-203ENST00000401522 NRAPQ86VF7 1730 aa20.42■□□□□ 0.86
CHRFAM7A-203ENST00000401522 HMOX1P09601 288 aa20.41■□□□□ 0.86
CHRFAM7A-203ENST00000401522 TOM1L2Q6ZVM7 507 aa20.41■□□□□ 0.86
CHRFAM7A-203ENST00000401522 CRB1P82279 1406 aa20.41■□□□□ 0.86
CHRFAM7A-203ENST00000401522 AEBP1Q8IUX7 1158 aa20.41■□□□□ 0.86
CHRFAM7A-203ENST00000401522 WDR63Q8IWG1 891 aa20.41■□□□□ 0.86
CHRFAM7A-203ENST00000401522 CARD10Q9BWT7 1032 aa20.41■□□□□ 0.86
CHRFAM7A-203ENST00000401522 RSPH6AQ9H0K4 717 aa20.41■□□□□ 0.86
CHRFAM7A-203ENST00000401522 CCDC27Q2M243 656 aa20.4■□□□□ 0.86
CHRFAM7A-203ENST00000401522 PNNQ9H307 717 aaKnown RBP20.4■□□□□ 0.86
CHRFAM7A-203ENST00000401522 USP35Q9P2H5 1018 aa20.39■□□□□ 0.86
CHRFAM7A-203ENST00000401522 TCP11L2Q8N4U5 519 aa20.39■□□□□ 0.85
CHRFAM7A-203ENST00000401522 USHBP1Q8N6Y0 703 aa20.39■□□□□ 0.85
CHRFAM7A-203ENST00000401522 PLEKHF1Q96S99 279 aa20.39■□□□□ 0.85
CHRFAM7A-203ENST00000401522 USP21Q9UK80 565 aa20.39■□□□□ 0.85
CHRFAM7A-203ENST00000401522 C8orf34Q49A92 452 aa20.38■□□□□ 0.85
CHRFAM7A-203ENST00000401522 ILDR1Q86SU0 546 aaPredicted RBP20.38■□□□□ 0.85
CHRFAM7A-203ENST00000401522 AFF2P51816 1311 aa20.38■□□□□ 0.85
CHRFAM7A-203ENST00000401522 CANXP27824 592 aaKnown RBP20.37■□□□□ 0.85
CHRFAM7A-203ENST00000401522 AAMPQ13685 434 aa20.37■□□□□ 0.85
CHRFAM7A-203ENST00000401522 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.37■□□□□ 0.85
CHRFAM7A-203ENST00000401522 PRKAR2BP31323 418 aa20.37■□□□□ 0.85
CHRFAM7A-203ENST00000401522 VPS72Q15906 364 aa20.36■□□□□ 0.85
CHRFAM7A-203ENST00000401522 CLUAP1Q96AJ1 413 aa20.35■□□□□ 0.85
CHRFAM7A-203ENST00000401522 SPATA31A1Q5TZJ5 1347 aa20.34■□□□□ 0.85
CHRFAM7A-203ENST00000401522 SPATA31A5Q5VU36 1347 aa20.34■□□□□ 0.85
CHRFAM7A-203ENST00000401522 SPATA31A7Q8IWB4 1347 aa20.34■□□□□ 0.85
CHRFAM7A-203ENST00000401522 RARSP54136 660 aaKnown RBP20.33■□□□□ 0.85
CHRFAM7A-203ENST00000401522 PHACTR3Q96KR7 559 aa20.33■□□□□ 0.84
CHRFAM7A-203ENST00000401522 THRAP3Q9Y2W1 955 aaKnown RBP20.33■□□□□ 0.84
CHRFAM7A-203ENST00000401522 RRP7AQ9Y3A4 280 aaKnown RBP20.33■□□□□ 0.84
CHRFAM7A-203ENST00000401522 PLEKHG2Q9H7P9 1386 aa20.32■□□□□ 0.84
CHRFAM7A-203ENST00000401522 RGS3P49796 1198 aa20.32■□□□□ 0.84
CHRFAM7A-203ENST00000401522 LAS1LQ9Y4W2 734 aaKnown RBP20.32■□□□□ 0.84
CHRFAM7A-203ENST00000401522 NEFMP07197 916 aa20.31■□□□□ 0.84
CHRFAM7A-203ENST00000401522 NEUROD2Q15784 382 aa20.31■□□□□ 0.84
CHRFAM7A-203ENST00000401522 RAPGEF4Q8WZA2 1011 aa20.31■□□□□ 0.84
CHRFAM7A-203ENST00000401522 MYH16Q9H6N6 1097 aa20.31■□□□□ 0.84
CHRFAM7A-203ENST00000401522 MAPK8IP3Q9UPT6 1336 aa20.31■□□□□ 0.84
CHRFAM7A-203ENST00000401522 IGHDP01880 384 aa20.31■□□□□ 0.84
CHRFAM7A-203ENST00000401522 PANK1Q8TE04 598 aa20.31■□□□□ 0.84
CHRFAM7A-203ENST00000401522 TRPC5Q9UL62 973 aaPredicted RBP20.31■□□□□ 0.84
CHRFAM7A-203ENST00000401522 COG6Q9Y2V7 657 aa20.3■□□□□ 0.84
CHRFAM7A-203ENST00000401522 ATRNO75882 1429 aa20.3■□□□□ 0.84
CHRFAM7A-203ENST00000401522 IL2RBP14784 551 aa20.29■□□□□ 0.84
CHRFAM7A-203ENST00000401522 TATP17735 454 aaPredicted RBP20.29■□□□□ 0.84
CHRFAM7A-203ENST00000401522 CCDC9Q9Y3X0 531 aaKnown RBP20.29■□□□□ 0.84
CHRFAM7A-203ENST00000401522 MEGF6O75095 1541 aa20.29■□□□□ 0.84
CHRFAM7A-203ENST00000401522 ZNF772Q68DY9 489 aaPredicted RBP20.29■□□□□ 0.84
CHRFAM7A-203ENST00000401522 BARGINQ6ZT62 677 aa20.29■□□□□ 0.84
CHRFAM7A-203ENST00000401522 DAXXQ9UER7 740 aaPredicted RBP20.29■□□□□ 0.84
CHRFAM7A-203ENST00000401522 AMOTQ4VCS5 1084 aa20.28■□□□□ 0.84
CHRFAM7A-203ENST00000401522 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.28■□□□□ 0.84
CHRFAM7A-203ENST00000401522 FRAT1Q92837 279 aaPredicted RBP20.27■□□□□ 0.84
CHRFAM7A-203ENST00000401522 GJD4Q96KN9 370 aaPredicted RBP20.27■□□□□ 0.84
CHRFAM7A-203ENST00000401522 CDCA7Q9BWT1 371 aaPredicted RBP20.27■□□□□ 0.84
CHRFAM7A-203ENST00000401522 QTRT2Q9H974 415 aaKnown RBP20.27■□□□□ 0.84
CHRFAM7A-203ENST00000401522 DISP2A7MBM2 1401 aa20.27■□□□□ 0.84
CHRFAM7A-203ENST00000401522 PLEKHO1Q53GL0 409 aaPredicted RBP20.27■□□□□ 0.84
CHRFAM7A-203ENST00000401522 OVOS2A0A0G2JMS6 1433 aa20.26■□□□□ 0.83
CHRFAM7A-203ENST00000401522 CT47B1P0C2W7 299 aaPredicted RBP20.26■□□□□ 0.83
CHRFAM7A-203ENST00000401522 TMPOP42166 694 aaKnown RBP20.26■□□□□ 0.83
CHRFAM7A-203ENST00000401522 MTHFSDQ2M296 383 aaKnown RBP20.26■□□□□ 0.83
CHRFAM7A-203ENST00000401522 PARP4Q9UKK3 1724 aaKnown RBP20.25■□□□□ 0.83
CHRFAM7A-203ENST00000401522 VIRMAQ69YN4 1812 aaKnown RBP20.25■□□□□ 0.83
CHRFAM7A-203ENST00000401522 NFE2L2Q16236 605 aa20.25■□□□□ 0.83
CHRFAM7A-203ENST00000401522 GAS2L2Q8NHY3 880 aa20.25■□□□□ 0.83
CHRFAM7A-203ENST00000401522 SPG7Q9UQ90 795 aa20.24■□□□□ 0.83
CHRFAM7A-203ENST00000401522 WNK3Q9BYP7 1800 aa20.24■□□□□ 0.83
CHRFAM7A-203ENST00000401522 GLI3P10071 1580 aa20.23■□□□□ 0.83
CHRFAM7A-203ENST00000401522 PKD1L3Q7Z443 1732 aa20.22■□□□□ 0.83
CHRFAM7A-203ENST00000401522 ONECUT3O60422 494 aaPredicted RBP20.22■□□□□ 0.83
CHRFAM7A-203ENST00000401522 RIPK4P57078 832 aa20.22■□□□□ 0.83
CHRFAM7A-203ENST00000401522 ZCRB1Q8TBF4 217 aaKnown RBP20.22■□□□□ 0.83
CHRFAM7A-203ENST00000401522 RGS17Q9UGC6 210 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms