RNA–Protein interactions for RNA: ENST00000401051.7

TTC39A-206, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 4

Gene TTC39A, Length 547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-206ENST00000401051 FSTL1Q12841 308 aa17.28■□□□□ 0.36
TTC39A-206ENST00000401051 C16orf71Q8IYS4 520 aaPredicted RBP17.28■□□□□ 0.36
TTC39A-206ENST00000401051 NLRP2Q9NX02 1062 aa17.28■□□□□ 0.36
TTC39A-206ENST00000401051 DCAF11Q8TEB1 546 aa17.27■□□□□ 0.36
TTC39A-206ENST00000401051 CABP2Q9NPB3 220 aa17.27■□□□□ 0.36
TTC39A-206ENST00000401051 NSD2O96028 1365 aa17.27■□□□□ 0.35
TTC39A-206ENST00000401051 ERBB3P21860 1342 aa17.26■□□□□ 0.35
TTC39A-206ENST00000401051 CABP1Q9NZU7 370 aa17.26■□□□□ 0.35
TTC39A-206ENST00000401051 C5P01031 1676 aa17.26■□□□□ 0.35
TTC39A-206ENST00000401051 PRIM1P49642 420 aaKnown RBP17.25■□□□□ 0.35
TTC39A-206ENST00000401051 DDX54Q8TDD1 881 aaKnown RBP17.25■□□□□ 0.35
TTC39A-206ENST00000401051 USP54Q70EL1 1684 aa17.25■□□□□ 0.35
TTC39A-206ENST00000401051 ANKRD36BQ8N2N9 1353 aa17.25■□□□□ 0.35
TTC39A-206ENST00000401051 TTC21BQ7Z4L5 1316 aa17.21■□□□□ 0.34
TTC39A-206ENST00000401051 FLAD1Q8NFF5 587 aa17.2■□□□□ 0.34
TTC39A-206ENST00000401051 LTN1O94822 1766 aa17.2■□□□□ 0.34
TTC39A-206ENST00000401051 TAF1LQ8IZX4 1826 aa17.19■□□□□ 0.34
TTC39A-206ENST00000401051 USP47Q96K76 1375 aa17.18■□□□□ 0.34
TTC39A-206ENST00000401051 KCPQ6ZWJ8 1503 aa17.18■□□□□ 0.34
TTC39A-206ENST00000401051 ANKRD24Q8TF21 1146 aa17.18■□□□□ 0.34
TTC39A-206ENST00000401051 PKD1L3Q7Z443 1732 aa17.18■□□□□ 0.34
TTC39A-206ENST00000401051 KIAA1551Q9HCM1 1747 aa17.18■□□□□ 0.34
TTC39A-206ENST00000401051 TOGARAM1Q9Y4F4 1720 aa17.18■□□□□ 0.34
TTC39A-206ENST00000401051 STAC3Q96MF2 364 aa17.17■□□□□ 0.34
TTC39A-206ENST00000401051 N4BP2Q86UW6 1770 aaPredicted RBP17.17■□□□□ 0.34
TTC39A-206ENST00000401051 PXDNLA1KZ92 1463 aa17.17■□□□□ 0.34
TTC39A-206ENST00000401051 C10orf71Q711Q0 1435 aa17.16■□□□□ 0.34
TTC39A-206ENST00000401051 ARHGAP27Q6ZUM4 889 aa17.16■□□□□ 0.34
TTC39A-206ENST00000401051 BCS1LQ9Y276 419 aa17.16■□□□□ 0.34
TTC39A-206ENST00000401051 TNRC6CQ9HCJ0 1690 aaKnown RBP17.16■□□□□ 0.34
TTC39A-206ENST00000401051 TTC21AQ8NDW8 1320 aa17.16■□□□□ 0.34
TTC39A-206ENST00000401051 PLEKHG2Q9H7P9 1386 aa17.15■□□□□ 0.34
TTC39A-206ENST00000401051 FAM161AQ3B820 660 aa17.15■□□□□ 0.34
TTC39A-206ENST00000401051 AMIGO3Q86WK7 504 aa17.15■□□□□ 0.34
TTC39A-206ENST00000401051 KIF13BQ9NQT8 1826 aa17.14■□□□□ 0.34
TTC39A-206ENST00000401051 C4BP0C0L5 1744 aa17.14■□□□□ 0.33
TTC39A-206ENST00000401051 SMC1BQ8NDV3 1235 aa17.14■□□□□ 0.33
TTC39A-206ENST00000401051 CENPJQ9HC77 1338 aaPredicted RBP17.14■□□□□ 0.33
TTC39A-206ENST00000401051 UBR3Q6ZT12 1888 aa17.14■□□□□ 0.33
TTC39A-206ENST00000401051 KIAA1210Q9ULL0 1709 aa17.13■□□□□ 0.33
TTC39A-206ENST00000401051 C9orf131Q5VYM1 1079 aa17.13■□□□□ 0.33
TTC39A-206ENST00000401051 RRAGCQ9HB90 399 aa17.13■□□□□ 0.33
TTC39A-206ENST00000401051 KDM2BQ8NHM5 1336 aa17.13■□□□□ 0.33
TTC39A-206ENST00000401051 PHF14O94880 888 aa17.12■□□□□ 0.33
TTC39A-206ENST00000401051 SMIM5Q71RC9 77 aa17.12■□□□□ 0.33
TTC39A-206ENST00000401051 AK7Q96M32 723 aa17.11■□□□□ 0.33
TTC39A-206ENST00000401051 ZNF692Q9BU19 519 aaPredicted RBP17.11■□□□□ 0.33
TTC39A-206ENST00000401051 FAM208AQ9UK61 1670 aaKnown RBP17.1■□□□□ 0.33
TTC39A-206ENST00000401051 BRCA1P38398 1863 aaKnown RBP17.1■□□□□ 0.33
TTC39A-206ENST00000401051 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.09■□□□□ 0.33
TTC39A-206ENST00000401051 A0A0G2JLW4 131 aa17.09■□□□□ 0.33
TTC39A-206ENST00000401051 NSD3Q9BZ95 1437 aa17.07■□□□□ 0.32
TTC39A-206ENST00000401051 PALLDQ8WX93 1383 aa17.07■□□□□ 0.32
TTC39A-206ENST00000401051 FCHSD2O94868 740 aa17.07■□□□□ 0.32
TTC39A-206ENST00000401051 HMGB2P26583 209 aaKnown RBP17.07■□□□□ 0.32
TTC39A-206ENST00000401051 NBPF1Q3BBV0 1214 aa17.07■□□□□ 0.32
TTC39A-206ENST00000401051 KTN1Q86UP2 1357 aaKnown RBP17.06■□□□□ 0.32
TTC39A-206ENST00000401051 ARFGEF1Q9Y6D6 1849 aa17.06■□□□□ 0.32
TTC39A-206ENST00000401051 TGFB2P61812 414 aa17.06■□□□□ 0.32
TTC39A-206ENST00000401051 ZCRB1Q8TBF4 217 aaKnown RBP17.06■□□□□ 0.32
TTC39A-206ENST00000401051 MON2Q7Z3U7 1717 aa17.06■□□□□ 0.32
TTC39A-206ENST00000401051 USP31Q70CQ4 1352 aa17.05■□□□□ 0.32
TTC39A-206ENST00000401051 FOXN1O15353 648 aa17.05■□□□□ 0.32
TTC39A-206ENST00000401051 MEGF6O75095 1541 aa17.05■□□□□ 0.32
TTC39A-206ENST00000401051 TNRC18O15417 2968 aaPredicted RBP17.04■□□□□ 0.32
TTC39A-206ENST00000401051 MMP10P09238 476 aa17.04■□□□□ 0.32
TTC39A-206ENST00000401051 SSFA2P28290 1259 aa17.04■□□□□ 0.32
TTC39A-206ENST00000401051 LTV1Q96GA3 475 aaPredicted RBP17.04■□□□□ 0.32
TTC39A-206ENST00000401051 PRDM10Q9NQV6 1147 aa17.04■□□□□ 0.32
TTC39A-206ENST00000401051 RNF181Q9P0P0 153 aa17.04■□□□□ 0.32
TTC39A-206ENST00000401051 DPEP1P16444 411 aa17.03■□□□□ 0.32
TTC39A-206ENST00000401051 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.03■□□□□ 0.32
TTC39A-206ENST00000401051 RGPD2P0DJD1 1756 aa17.02■□□□□ 0.32
TTC39A-206ENST00000401051 EVC2Q86UK5 1308 aa17.02■□□□□ 0.32
TTC39A-206ENST00000401051 SBF1O95248 1867 aa17.01■□□□□ 0.31
TTC39A-206ENST00000401051 NME9Q86XW9 330 aa17.01■□□□□ 0.31
TTC39A-206ENST00000401051 MLLT1Q03111 559 aaPredicted RBP16.99■□□□□ 0.31
TTC39A-206ENST00000401051 IP6K1Q92551 441 aa16.99■□□□□ 0.31
TTC39A-206ENST00000401051 ABHD8Q96I13 439 aa16.99■□□□□ 0.31
TTC39A-206ENST00000401051 MKRN1Q9UHC7 482 aaKnown RBP16.99■□□□□ 0.31
TTC39A-206ENST00000401051 MPRIPQ6WCQ1 1025 aa16.98■□□□□ 0.31
TTC39A-206ENST00000401051 LINC00116Q8NCU8 138 aa16.97■□□□□ 0.31
TTC39A-206ENST00000401051 DCAF5Q96JK2 942 aa16.97■□□□□ 0.31
TTC39A-206ENST00000401051 ITGB4P16144 1822 aa16.97■□□□□ 0.31
TTC39A-206ENST00000401051 C4AP0C0L4 1744 aa16.96■□□□□ 0.31
TTC39A-206ENST00000401051 MAP2P11137 1827 aaKnown RBP16.96■□□□□ 0.31
TTC39A-206ENST00000401051 VEGFAP15692 232 aaPredicted RBP16.96■□□□□ 0.31
TTC39A-206ENST00000401051 KCNA3P22001 575 aa16.96■□□□□ 0.31
TTC39A-206ENST00000401051 CTCFP49711 727 aaPredicted RBP16.96■□□□□ 0.31
TTC39A-206ENST00000401051 SBNO2Q9Y2G9 1366 aa16.95■□□□□ 0.3
TTC39A-206ENST00000401051 GNPATO15228 680 aa16.95■□□□□ 0.3
TTC39A-206ENST00000401051 SMARCC1Q92922 1105 aaPredicted RBP16.95■□□□□ 0.3
TTC39A-206ENST00000401051 CCDC87Q9NVE4 849 aa16.95■□□□□ 0.3
TTC39A-206ENST00000401051 AIDAQ96BJ3 306 aa16.94■□□□□ 0.3
TTC39A-206ENST00000401051 CREBZFQ9NS37 354 aa16.94■□□□□ 0.3
TTC39A-206ENST00000401051 DALRD3Q5D0E6 543 aaKnown RBP16.93■□□□□ 0.3
TTC39A-206ENST00000401051 PIM2Q9P1W9 311 aa16.93■□□□□ 0.3
TTC39A-206ENST00000401051 ZC3H4Q9UPT8 1303 aaKnown RBP16.93■□□□□ 0.3
TTC39A-206ENST00000401051 LBX1P52954 281 aa16.92■□□□□ 0.3
TTC39A-206ENST00000401051 GLTPD2A6NH11 291 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms