RNA–Protein interactions for RNA: ENST00000400777.7

CASP9-204, Transcript of caspase 9, humanhuman

TSL 1 (best)

Gene CASP9, Length 1,878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-204ENST00000400777 PLCH1Q4KWH8 1693 aa21.07■□□□□ 0.96
CASP9-204ENST00000400777 SLFN5Q08AF3 891 aa21.07■□□□□ 0.96
CASP9-204ENST00000400777 RTF1Q92541 710 aaKnown RBP21.07■□□□□ 0.96
CASP9-204ENST00000400777 MEGF6O75095 1541 aa21.06■□□□□ 0.96
CASP9-204ENST00000400777 MEX3CQ5U5Q3 659 aaKnown RBP21.06■□□□□ 0.96
CASP9-204ENST00000400777 PLEKHG2Q9H7P9 1386 aa21.05■□□□□ 0.96
CASP9-204ENST00000400777 GNAT3A8MTJ3 354 aa21.05■□□□□ 0.96
CASP9-204ENST00000400777 CALD1Q05682 793 aaKnown RBP21.05■□□□□ 0.96
CASP9-204ENST00000400777 DCTN1Q14203 1278 aa21.05■□□□□ 0.96
CASP9-204ENST00000400777 ZNF530Q6P9A1 599 aaPredicted RBP21.05■□□□□ 0.96
CASP9-204ENST00000400777 THUMPD2Q9BTF0 503 aaKnown RBP21.05■□□□□ 0.96
CASP9-204ENST00000400777 IL2RBP14784 551 aa21.04■□□□□ 0.96
CASP9-204ENST00000400777 MCM10Q7L590 875 aa21.04■□□□□ 0.96
CASP9-204ENST00000400777 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.04■□□□□ 0.96
CASP9-204ENST00000400777 SPG7Q9UQ90 795 aa21.04■□□□□ 0.96
CASP9-204ENST00000400777 MAP3K5Q99683 1374 aa21.04■□□□□ 0.96
CASP9-204ENST00000400777 HTATSF1O43719 755 aaKnown RBP21.03■□□□□ 0.96
CASP9-204ENST00000400777 DUSP27Q5VZP5 1158 aa21.03■□□□□ 0.96
CASP9-204ENST00000400777 UNC5CLQ8IV45 518 aa21.03■□□□□ 0.96
CASP9-204ENST00000400777 FNBP4Q8N3X1 1017 aaPredicted RBP21.03■□□□□ 0.96
CASP9-204ENST00000400777 IL16Q14005 1332 aa21.03■□□□□ 0.96
CASP9-204ENST00000400777 C1orf141Q5JVX7 400 aa21.03■□□□□ 0.96
CASP9-204ENST00000400777 TRMT2AQ8IZ69 625 aaKnown RBP21.03■□□□□ 0.96
CASP9-204ENST00000400777 OVOS2A0A0G2JMS6 1433 aa21.02■□□□□ 0.96
CASP9-204ENST00000400777 NWD2Q9ULI1 1742 aa21.02■□□□□ 0.96
CASP9-204ENST00000400777 AKAP4Q5JQC9 854 aa21.02■□□□□ 0.96
CASP9-204ENST00000400777 DLG5Q8TDM6 1919 aa21.02■□□□□ 0.95
CASP9-204ENST00000400777 FBXO41Q8TF61 875 aa21.01■□□□□ 0.95
CASP9-204ENST00000400777 MYH16Q9H6N6 1097 aa21.01■□□□□ 0.95
CASP9-204ENST00000400777 NRAPQ86VF7 1730 aa21.01■□□□□ 0.95
CASP9-204ENST00000400777 CCDC9Q9Y3X0 531 aaKnown RBP21.01■□□□□ 0.95
CASP9-204ENST00000400777 BCL9LQ86UU0 1499 aa21■□□□□ 0.95
CASP9-204ENST00000400777 USP21Q9UK80 565 aa20.99■□□□□ 0.95
CASP9-204ENST00000400777 SPATA31A1Q5TZJ5 1347 aa20.99■□□□□ 0.95
CASP9-204ENST00000400777 LAS1LQ9Y4W2 734 aaKnown RBP20.98■□□□□ 0.95
CASP9-204ENST00000400777 SPATA31A5Q5VU36 1347 aa20.98■□□□□ 0.95
CASP9-204ENST00000400777 SPATA31A7Q8IWB4 1347 aa20.98■□□□□ 0.95
CASP9-204ENST00000400777 IL17REQ8NFR9 667 aa20.98■□□□□ 0.95
CASP9-204ENST00000400777 ZCRB1Q8TBF4 217 aaKnown RBP20.98■□□□□ 0.95
CASP9-204ENST00000400777 THRAP3Q9Y2W1 955 aaKnown RBP20.98■□□□□ 0.95
CASP9-204ENST00000400777 GNAI1P63096 354 aa20.97■□□□□ 0.95
CASP9-204ENST00000400777 IFNL2Q8IZJ0 200 aa20.97■□□□□ 0.95
CASP9-204ENST00000400777 IFT57Q9NWB7 429 aa20.97■□□□□ 0.95
CASP9-204ENST00000400777 MPRIPQ6WCQ1 1025 aa20.96■□□□□ 0.95
CASP9-204ENST00000400777 TSR2Q969E8 191 aaKnown RBP20.96■□□□□ 0.95
CASP9-204ENST00000400777 CFAP44Q96MT7 982 aa20.96■□□□□ 0.95
CASP9-204ENST00000400777 PARP4Q9UKK3 1724 aaKnown RBP20.96■□□□□ 0.95
CASP9-204ENST00000400777 FANCIQ9NVI1 1328 aa20.96■□□□□ 0.95
CASP9-204ENST00000400777 PHKG2P15735 406 aa20.96■□□□□ 0.95
CASP9-204ENST00000400777 VPS72Q15906 364 aa20.96■□□□□ 0.95
CASP9-204ENST00000400777 PCDH11XQ9BZA7 1347 aa20.95■□□□□ 0.94
CASP9-204ENST00000400777 PCDH11YQ9BZA8 1340 aa20.95■□□□□ 0.94
CASP9-204ENST00000400777 CYP27B1O15528 508 aa20.95■□□□□ 0.94
CASP9-204ENST00000400777 DISP2A7MBM2 1401 aa20.95■□□□□ 0.94
CASP9-204ENST00000400777 AFF2P51816 1311 aa20.95■□□□□ 0.94
CASP9-204ENST00000400777 ZNF853P0CG23 659 aa20.94■□□□□ 0.94
CASP9-204ENST00000400777 LGR6Q9HBX8 967 aa20.94■□□□□ 0.94
CASP9-204ENST00000400777 CEMIPQ8WUJ3 1361 aa20.94■□□□□ 0.94
CASP9-204ENST00000400777 PKD1L3Q7Z443 1732 aa20.94■□□□□ 0.94
CASP9-204ENST00000400777 CDCA7Q9BWT1 371 aaPredicted RBP20.94■□□□□ 0.94
CASP9-204ENST00000400777 MBIPQ9NS73 344 aa20.92■□□□□ 0.94
CASP9-204ENST00000400777 RNMTO43148 476 aaKnown RBP20.92■□□□□ 0.94
CASP9-204ENST00000400777 HSP90AB1P08238 724 aaKnown RBP20.92■□□□□ 0.94
CASP9-204ENST00000400777 BARGINQ6ZT62 677 aa20.92■□□□□ 0.94
CASP9-204ENST00000400777 DDX54Q8TDD1 881 aaKnown RBP20.92■□□□□ 0.94
CASP9-204ENST00000400777 TEFQ10587 303 aa20.91■□□□□ 0.94
CASP9-204ENST00000400777 EXOC5O00471 708 aa20.9■□□□□ 0.94
CASP9-204ENST00000400777 CHL1O00533 1208 aa20.9■□□□□ 0.94
CASP9-204ENST00000400777 DCAF5Q96JK2 942 aa20.9■□□□□ 0.94
CASP9-204ENST00000400777 TAF7Q15545 349 aaPredicted RBP20.9■□□□□ 0.94
CASP9-204ENST00000400777 RCAN3Q9UKA8 241 aa20.9■□□□□ 0.94
CASP9-204ENST00000400777 TSPYL4Q9UJ04 414 aa20.89■□□□□ 0.93
CASP9-204ENST00000400777 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.89■□□□□ 0.93
CASP9-204ENST00000400777 LRRC37A3O60309 1634 aa20.89■□□□□ 0.93
CASP9-204ENST00000400777 EXOSC9Q06265 439 aaKnown RBP20.88■□□□□ 0.93
CASP9-204ENST00000400777 FAM98CQ17RN3 349 aaKnown RBP20.88■□□□□ 0.93
CASP9-204ENST00000400777 MIS18AQ9NYP9 233 aa20.88■□□□□ 0.93
CASP9-204ENST00000400777 SUPT16HQ9Y5B9 1047 aaKnown RBP20.88■□□□□ 0.93
CASP9-204ENST00000400777 DDB1Q16531 1140 aa20.88■□□□□ 0.93
CASP9-204ENST00000400777 KDM6AO15550 1401 aaPredicted RBP20.87■□□□□ 0.93
CASP9-204ENST00000400777 TRPC5Q9UL62 973 aaPredicted RBP20.87■□□□□ 0.93
CASP9-204ENST00000400777 GJD4Q96KN9 370 aaPredicted RBP20.86■□□□□ 0.93
CASP9-204ENST00000400777 BABAM1Q9NWV8 329 aa20.86■□□□□ 0.93
CASP9-204ENST00000400777 TNS2Q63HR2 1409 aa20.86■□□□□ 0.93
CASP9-204ENST00000400777 NKX1-1Q15270 411 aaPredicted RBP20.86■□□□□ 0.93
CASP9-204ENST00000400777 WNK3Q9BYP7 1800 aa20.85■□□□□ 0.93
CASP9-204ENST00000400777 CT47B1P0C2W7 299 aaPredicted RBP20.84■□□□□ 0.93
CASP9-204ENST00000400777 SLC52A2Q9HAB3 445 aa20.84■□□□□ 0.93
CASP9-204ENST00000400777 ADAMTS7Q9UKP4 1686 aa20.84■□□□□ 0.93
CASP9-204ENST00000400777 ATRNO75882 1429 aa20.84■□□□□ 0.93
CASP9-204ENST00000400777 BTBD11A6QL63 1104 aa20.84■□□□□ 0.93
CASP9-204ENST00000400777 QTRT2Q9H974 415 aaKnown RBP20.84■□□□□ 0.93
CASP9-204ENST00000400777 SHANK3Q9BYB0 1731 aa20.83■□□□□ 0.93
CASP9-204ENST00000400777 A0A0G2JS52 829 aa20.83■□□□□ 0.92
CASP9-204ENST00000400777 MYT1Q01538 1121 aa20.83■□□□□ 0.92
CASP9-204ENST00000400777 NFATC2IPQ8NCF5 419 aa20.82■□□□□ 0.92
CASP9-204ENST00000400777 CABP4P57796 275 aa20.81■□□□□ 0.92
CASP9-204ENST00000400777 ELL2O00472 640 aaPredicted RBP20.81■□□□□ 0.92
CASP9-204ENST00000400777 C8orf58Q8NAV2 365 aa20.81■□□□□ 0.92
CASP9-204ENST00000400777 ERVV-2B6SEH9 535 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms