RNA–Protein interactions for RNA: ENST00000400097.5

SNRPN-203, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-203ENST00000400097 SHANK3Q9BYB0 1731 aa19.36■□□□□ 0.69
SNRPN-203ENST00000400097 U2SURPO15042 1029 aaKnown RBP19.36■□□□□ 0.69
SNRPN-203ENST00000400097 MARCH10Q8NA82 808 aaPredicted RBP19.36■□□□□ 0.69
SNRPN-203ENST00000400097 SULT6B1Q6IMI4 303 aa19.35■□□□□ 0.69
SNRPN-203ENST00000400097 CCDC125Q86Z20 511 aa19.35■□□□□ 0.69
SNRPN-203ENST00000400097 NUDCQ9Y266 331 aa19.35■□□□□ 0.69
SNRPN-203ENST00000400097 PKD1L3Q7Z443 1732 aa19.34■□□□□ 0.69
SNRPN-203ENST00000400097 EP400Q96L91 3159 aa19.34■□□□□ 0.69
SNRPN-203ENST00000400097 COL3A1P02461 1466 aaPredicted RBP19.34■□□□□ 0.69
SNRPN-203ENST00000400097 SPG7Q9UQ90 795 aa19.33■□□□□ 0.69
SNRPN-203ENST00000400097 MYBBP1AQ9BQG0 1328 aaKnown RBP19.33■□□□□ 0.68
SNRPN-203ENST00000400097 TRIM37O94972 964 aa19.32■□□□□ 0.68
SNRPN-203ENST00000400097 HMOX1P09601 288 aa19.32■□□□□ 0.68
SNRPN-203ENST00000400097 AEBP1Q8IUX7 1158 aa19.32■□□□□ 0.68
SNRPN-203ENST00000400097 PRKRIP1Q9H875 184 aaPredicted RBP19.32■□□□□ 0.68
SNRPN-203ENST00000400097 PCDH11XQ9BZA7 1347 aa19.31■□□□□ 0.68
SNRPN-203ENST00000400097 PCDH11YQ9BZA8 1340 aa19.31■□□□□ 0.68
SNRPN-203ENST00000400097 TNS1Q9HBL0 1735 aaKnown RBP19.3■□□□□ 0.68
SNRPN-203ENST00000400097 PLEKHO1Q53GL0 409 aaPredicted RBP19.29■□□□□ 0.68
SNRPN-203ENST00000400097 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.29■□□□□ 0.683e-8■□□□□ 11.3
SNRPN-203ENST00000400097 ANP32CO43423 234 aa19.29■□□□□ 0.68
SNRPN-203ENST00000400097 DOT1LQ8TEK3 1739 aa19.28■□□□□ 0.68
SNRPN-203ENST00000400097 KDRP35968 1356 aa19.28■□□□□ 0.68
SNRPN-203ENST00000400097 U2AF1L5P0DN76 240 aaPredicted RBP19.28■□□□□ 0.68
SNRPN-203ENST00000400097 U2AF1Q01081 240 aaKnown RBP eCLIP19.28■□□□□ 0.68
SNRPN-203ENST00000400097 PLEKHG2Q9H7P9 1386 aa19.27■□□□□ 0.68
SNRPN-203ENST00000400097 BAG6P46379 1132 aa19.27■□□□□ 0.68
SNRPN-203ENST00000400097 AMOTQ4VCS5 1084 aa19.27■□□□□ 0.68
SNRPN-203ENST00000400097 ACSBG1Q96GR2 724 aa19.27■□□□□ 0.68
SNRPN-203ENST00000400097 NHSQ6T4R5 1651 aa19.27■□□□□ 0.67
SNRPN-203ENST00000400097 BCL9O00512 1426 aa19.26■□□□□ 0.67
SNRPN-203ENST00000400097 APBA3O96018 575 aa19.25■□□□□ 0.67
SNRPN-203ENST00000400097 IFNL2Q8IZJ0 200 aa19.25■□□□□ 0.67
SNRPN-203ENST00000400097 BCL11BQ9C0K0 894 aaPredicted RBP19.25■□□□□ 0.67
SNRPN-203ENST00000400097 VIRMAQ69YN4 1812 aaKnown RBP19.25■□□□□ 0.67
SNRPN-203ENST00000400097 ITGB4P16144 1822 aa19.24■□□□□ 0.67
SNRPN-203ENST00000400097 CYP27B1O15528 508 aa19.24■□□□□ 0.67
SNRPN-203ENST00000400097 C1orf141Q5JVX7 400 aa19.24■□□□□ 0.67
SNRPN-203ENST00000400097 ZNF530Q6P9A1 599 aaPredicted RBP19.24■□□□□ 0.67
SNRPN-203ENST00000400097 SYTL4Q96C24 671 aaPredicted RBP19.24■□□□□ 0.67
SNRPN-203ENST00000400097 BTAF1O14981 1849 aa19.23■□□□□ 0.67
SNRPN-203ENST00000400097 DEFB132Q7Z7B7 95 aa19.22■□□□□ 0.67
SNRPN-203ENST00000400097 KCNQ2O43526 872 aa19.22■□□□□ 0.67
SNRPN-203ENST00000400097 NEFMP07197 916 aa19.22■□□□□ 0.67
SNRPN-203ENST00000400097 PHKG2P15735 406 aa19.22■□□□□ 0.67
SNRPN-203ENST00000400097 HSP90AB1P08238 724 aaKnown RBP19.21■□□□□ 0.67
SNRPN-203ENST00000400097 PRKAR2BP31323 418 aa19.21■□□□□ 0.67
SNRPN-203ENST00000400097 FCHSD2O94868 740 aa19.2■□□□□ 0.66
SNRPN-203ENST00000400097 PRIM1P49642 420 aaKnown RBP19.2■□□□□ 0.66
SNRPN-203ENST00000400097 EN1Q05925 392 aaPredicted RBP19.2■□□□□ 0.66
SNRPN-203ENST00000400097 WDR43Q15061 677 aaKnown RBP eCLIP19.19■□□□□ 0.66
SNRPN-203ENST00000400097 RSPH6AQ9H0K4 717 aa19.19■□□□□ 0.66
SNRPN-203ENST00000400097 PNNQ9H307 717 aaKnown RBP19.19■□□□□ 0.66
SNRPN-203ENST00000400097 TOGARAM1Q9Y4F4 1720 aa19.19■□□□□ 0.66
SNRPN-203ENST00000400097 SCN11AQ9UI33 1791 aa19.18■□□□□ 0.66
SNRPN-203ENST00000400097 NKX1-1Q15270 411 aaPredicted RBP19.18■□□□□ 0.66
SNRPN-203ENST00000400097 PTF1AQ7RTS3 328 aa19.18■□□□□ 0.66
SNRPN-203ENST00000400097 RGPD3A6NKT7 1758 aaPredicted RBP19.17■□□□□ 0.66
SNRPN-203ENST00000400097 RGPD4Q7Z3J3 1758 aa19.17■□□□□ 0.66
SNRPN-203ENST00000400097 MTHFSDQ2M296 383 aaKnown RBP19.17■□□□□ 0.66
SNRPN-203ENST00000400097 AKAP4Q5JQC9 854 aa19.17■□□□□ 0.66
SNRPN-203ENST00000400097 GAS2L2Q8NHY3 880 aa19.17■□□□□ 0.66
SNRPN-203ENST00000400097 MPRIPQ6WCQ1 1025 aa19.16■□□□□ 0.66
SNRPN-203ENST00000400097 DCAF5Q96JK2 942 aa19.16■□□□□ 0.66
SNRPN-203ENST00000400097 EZH2Q15910 746 aaKnown RBP19.15■□□□□ 0.66
SNRPN-203ENST00000400097 PLSCR1O15162 318 aa19.14■□□□□ 0.66
SNRPN-203ENST00000400097 MAPK8IP3Q9UPT6 1336 aa19.14■□□□□ 0.65
SNRPN-203ENST00000400097 TMOD3Q9NYL9 352 aa19.14■□□□□ 0.65
SNRPN-203ENST00000400097 DLG5Q8TDM6 1919 aa19.13■□□□□ 0.65
SNRPN-203ENST00000400097 RREB1Q92766 1687 aa19.13■□□□□ 0.65
SNRPN-203ENST00000400097 PHACTR3Q96KR7 559 aa19.13■□□□□ 0.65
SNRPN-203ENST00000400097 CAMKK2Q96RR4 588 aa19.13■□□□□ 0.65
SNRPN-203ENST00000400097 ERVV-2B6SEH9 535 aa19.12■□□□□ 0.65
SNRPN-203ENST00000400097 GNAT3A8MTJ3 354 aa19.11■□□□□ 0.65
SNRPN-203ENST00000400097 CABP4P57796 275 aa19.11■□□□□ 0.65
SNRPN-203ENST00000400097 MRS2Q9HD23 443 aa19.11■□□□□ 0.65
SNRPN-203ENST00000400097 MAP3K5Q99683 1374 aa19.11■□□□□ 0.65
SNRPN-203ENST00000400097 KDM6AO15550 1401 aaPredicted RBP19.1■□□□□ 0.65
SNRPN-203ENST00000400097 LY75O60449 1722 aa19.1■□□□□ 0.65
SNRPN-203ENST00000400097 NUP188Q5SRE5 1749 aa19.1■□□□□ 0.65
SNRPN-203ENST00000400097 PIGBQ92521 554 aa19.09■□□□□ 0.65
SNRPN-203ENST00000400097 RTF1Q92541 710 aaKnown RBP19.09■□□□□ 0.65
SNRPN-203ENST00000400097 TXNRD1Q16881 649 aa19.08■□□□□ 0.65
SNRPN-203ENST00000400097 RNMTO43148 476 aaKnown RBP19.07■□□□□ 0.64
SNRPN-203ENST00000400097 CCDC184Q52MB2 194 aa19.07■□□□□ 0.64
SNRPN-203ENST00000400097 SMARCC1Q92922 1105 aaPredicted RBP19.07■□□□□ 0.64
SNRPN-203ENST00000400097 LGR6Q9HBX8 967 aa19.07■□□□□ 0.64
SNRPN-203ENST00000400097 ADAMTS8Q9UP79 889 aa19.07■□□□□ 0.64
SNRPN-203ENST00000400097 PLEKHF1Q96S99 279 aa19.07■□□□□ 0.64
SNRPN-203ENST00000400097 NBPF14Q5TI25 921 aa19.06■□□□□ 0.64
SNRPN-203ENST00000400097 DIEXFQ68CQ4 756 aaKnown RBP19.06■□□□□ 0.64
SNRPN-203ENST00000400097 CCDC146Q8IYE0 955 aa19.06■□□□□ 0.64
SNRPN-203ENST00000400097 NFATC2IPQ8NCF5 419 aa19.06■□□□□ 0.64
SNRPN-203ENST00000400097 ADAMTS7Q9UKP4 1686 aa19.06■□□□□ 0.64
SNRPN-203ENST00000400097 TEFQ10587 303 aa19.05■□□□□ 0.64
SNRPN-203ENST00000400097 PALLDQ8WX93 1383 aa19.05■□□□□ 0.64
SNRPN-203ENST00000400097 NFE2L2Q16236 605 aa19.04■□□□□ 0.64
SNRPN-203ENST00000400097 RUNDC1Q96C34 613 aa19.04■□□□□ 0.64
SNRPN-203ENST00000400097 SLC52A2Q9HAB3 445 aa19.04■□□□□ 0.64
SNRPN-203ENST00000400097 SLC27A3Q5K4L6 730 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms