RNA–Protein interactions for RNA: ENST00000399866.3

LINC02449-202, Transcript of long intergenic non-protein coding RNA 2449, humanhuman

TSL 3 BASIC

Gene LINC02449, Length 517 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02449-202ENST00000399866 SSH1Q8WYL5 1049 aa11.1□□□□□ -0.63
LINC02449-202ENST00000399866 ZNF428Q96B54 188 aa11.1□□□□□ -0.63
LINC02449-202ENST00000399866 LTBP4Q8N2S1 1624 aa11.09□□□□□ -0.63
LINC02449-202ENST00000399866 CPDO75976 1380 aa11.09□□□□□ -0.63
LINC02449-202ENST00000399866 HTATSF1O43719 755 aaKnown RBP11.09□□□□□ -0.63
LINC02449-202ENST00000399866 ZC3H6P61129 1189 aaKnown RBP11.09□□□□□ -0.63
LINC02449-202ENST00000399866 PANK1Q8TE04 598 aa11.09□□□□□ -0.63
LINC02449-202ENST00000399866 RTF1Q92541 710 aaKnown RBP11.09□□□□□ -0.63
LINC02449-202ENST00000399866 LRRC59Q96AG4 307 aaKnown RBP11.09□□□□□ -0.63
LINC02449-202ENST00000399866 KIF16BQ96L93 1317 aa11.09□□□□□ -0.63
LINC02449-202ENST00000399866 CHL1O00533 1208 aa11.08□□□□□ -0.64
LINC02449-202ENST00000399866 ZKSCAN2Q63HK3 967 aa11.08□□□□□ -0.64
LINC02449-202ENST00000399866 TNNQ9UQP3 1299 aa11.08□□□□□ -0.64
LINC02449-202ENST00000399866 AXIN2Q9Y2T1 843 aa11.08□□□□□ -0.64
LINC02449-202ENST00000399866 ERBB3P21860 1342 aa11.08□□□□□ -0.64
LINC02449-202ENST00000399866 KIAA0232Q92628 1395 aa11.07□□□□□ -0.64
LINC02449-202ENST00000399866 GNAT3A8MTJ3 354 aa11.07□□□□□ -0.64
LINC02449-202ENST00000399866 VAMP4O75379 141 aa11.07□□□□□ -0.64
LINC02449-202ENST00000399866 MS4A1P11836 297 aa11.07□□□□□ -0.64
LINC02449-202ENST00000399866 RLBP1P12271 317 aa11.07□□□□□ -0.64
LINC02449-202ENST00000399866 TWISTNBQ3B726 338 aaPredicted RBP11.07□□□□□ -0.64
LINC02449-202ENST00000399866 TSPYL6Q8N831 410 aa11.07□□□□□ -0.64
LINC02449-202ENST00000399866 C8orf58Q8NAV2 365 aa11.07□□□□□ -0.64
LINC02449-202ENST00000399866 CABLES1Q8TDN4 633 aa11.07□□□□□ -0.64
LINC02449-202ENST00000399866 TSHZ2Q9NRE2 1034 aa11.07□□□□□ -0.64
LINC02449-202ENST00000399866 COG6Q9Y2V7 657 aa11.07□□□□□ -0.64
LINC02449-202ENST00000399866 AHDC1Q5TGY3 1603 aaPredicted RBP11.06□□□□□ -0.64
LINC02449-202ENST00000399866 ROBO1Q9Y6N7 1651 aa11.06□□□□□ -0.64
LINC02449-202ENST00000399866 BRPF1P55201 1214 aaPredicted RBP11.06□□□□□ -0.64
LINC02449-202ENST00000399866 DZIP1LQ8IYY4 767 aaKnown RBP11.06□□□□□ -0.64
LINC02449-202ENST00000399866 OVOS2A0A0G2JMS6 1433 aa11.05□□□□□ -0.64
LINC02449-202ENST00000399866 ATF7IPQ6VMQ6 1270 aa11.05□□□□□ -0.64
LINC02449-202ENST00000399866 MRPL50Q8N5N7 158 aaKnown RBP11.05□□□□□ -0.64
LINC02449-202ENST00000399866 NOB1Q9ULX3 412 aaKnown RBP11.05□□□□□ -0.64
LINC02449-202ENST00000399866 KDM2BQ8NHM5 1336 aa11.05□□□□□ -0.64
LINC02449-202ENST00000399866 ADAMTS7Q9UKP4 1686 aa11.04□□□□□ -0.64
LINC02449-202ENST00000399866 IPO8O15397 1037 aaKnown RBP11.04□□□□□ -0.64
LINC02449-202ENST00000399866 TRIM27P14373 513 aa11.04□□□□□ -0.64
LINC02449-202ENST00000399866 AAMPQ13685 434 aa11.04□□□□□ -0.64
LINC02449-202ENST00000399866 CHRNA2Q15822 529 aa11.04□□□□□ -0.64
LINC02449-202ENST00000399866 AMOTQ4VCS5 1084 aa11.04□□□□□ -0.64
LINC02449-202ENST00000399866 PLEKHO1Q53GL0 409 aaPredicted RBP11.04□□□□□ -0.64
LINC02449-202ENST00000399866 ZNF530Q6P9A1 599 aaPredicted RBP11.04□□□□□ -0.64
LINC02449-202ENST00000399866 FTSJ3Q8IY81 847 aaKnown RBP11.04□□□□□ -0.64
LINC02449-202ENST00000399866 CLUAP1Q96AJ1 413 aa11.04□□□□□ -0.64
LINC02449-202ENST00000399866 TSPYL4Q9UJ04 414 aa11.04□□□□□ -0.64
LINC02449-202ENST00000399866 CEMIPQ8WUJ3 1361 aa11.03□□□□□ -0.64
LINC02449-202ENST00000399866 PLEKHG2Q9H7P9 1386 aa11.03□□□□□ -0.64
LINC02449-202ENST00000399866 KDM3BQ7LBC6 1761 aa11.03□□□□□ -0.64
LINC02449-202ENST00000399866 ELL2O00472 640 aaPredicted RBP11.03□□□□□ -0.64
LINC02449-202ENST00000399866 HAP1P54257 671 aaPredicted RBP11.03□□□□□ -0.64
LINC02449-202ENST00000399866 MVPQ14764 893 aaKnown RBP11.03□□□□□ -0.64
LINC02449-202ENST00000399866 CENPQQ7L2Z9 268 aaPredicted RBP11.03□□□□□ -0.64
LINC02449-202ENST00000399866 IL17REQ8NFR9 667 aa11.03□□□□□ -0.64
LINC02449-202ENST00000399866 PKD1L3Q7Z443 1732 aa11.03□□□□□ -0.64
LINC02449-202ENST00000399866 MEGF6O75095 1541 aa11.03□□□□□ -0.64
LINC02449-202ENST00000399866 COL22A1Q8NFW1 1626 aaPredicted RBP11.02□□□□□ -0.64
LINC02449-202ENST00000399866 KRT24Q2M2I5 525 aa11.02□□□□□ -0.65
LINC02449-202ENST00000399866 AKAP4Q5JQC9 854 aa11.02□□□□□ -0.65
LINC02449-202ENST00000399866 BABAM1Q9NWV8 329 aa11.02□□□□□ -0.65
LINC02449-202ENST00000399866 NLRP2Q9NX02 1062 aa11.02□□□□□ -0.65
LINC02449-202ENST00000399866 PARP4Q9UKK3 1724 aaKnown RBP11.01□□□□□ -0.65
LINC02449-202ENST00000399866 COL5A2P05997 1499 aaPredicted RBP11.01□□□□□ -0.65
LINC02449-202ENST00000399866 TCERG1O14776 1098 aaKnown RBP11.01□□□□□ -0.65
LINC02449-202ENST00000399866 CSB-PGBD3P0DP91 1061 aa11.01□□□□□ -0.65
LINC02449-202ENST00000399866 ARHGAP45Q92619 1136 aa11.01□□□□□ -0.65
LINC02449-202ENST00000399866 MIS18AQ9NYP9 233 aa11.01□□□□□ -0.65
LINC02449-202ENST00000399866 SIPA1L3O60292 1781 aaPredicted RBP11□□□□□ -0.65
LINC02449-202ENST00000399866 TAF7Q15545 349 aaPredicted RBP11□□□□□ -0.65
LINC02449-202ENST00000399866 C1orf141Q5JVX7 400 aa11□□□□□ -0.65
LINC02449-202ENST00000399866 TMEM57Q8N5G2 664 aa11□□□□□ -0.65
LINC02449-202ENST00000399866 RAPGEF4Q8WZA2 1011 aa11□□□□□ -0.65
LINC02449-202ENST00000399866 PRDM11Q9NQV5 511 aa11□□□□□ -0.65
LINC02449-202ENST00000399866 ABCC4O15439 1325 aa11□□□□□ -0.65
LINC02449-202ENST00000399866 VIRMAQ69YN4 1812 aaKnown RBP11□□□□□ -0.65
LINC02449-202ENST00000399866 RNMTO43148 476 aaKnown RBP10.99□□□□□ -0.65
LINC02449-202ENST00000399866 TATP17735 454 aaPredicted RBP10.99□□□□□ -0.65
LINC02449-202ENST00000399866 ITPRIPQ8IWB1 547 aa10.99□□□□□ -0.65
LINC02449-202ENST00000399866 API5Q9BZZ5 524 aaKnown RBP10.99□□□□□ -0.65
LINC02449-202ENST00000399866 LGR6Q9HBX8 967 aa10.99□□□□□ -0.65
LINC02449-202ENST00000399866 DDX19BQ9UMR2 479 aa10.99□□□□□ -0.65
LINC02449-202ENST00000399866 SOS1Q07889 1333 aaPredicted RBP10.99□□□□□ -0.65
LINC02449-202ENST00000399866 WDR17Q8IZU2 1322 aa10.99□□□□□ -0.65
LINC02449-202ENST00000399866 RGS12O14924 1447 aa10.99□□□□□ -0.65
LINC02449-202ENST00000399866 COL16A1Q07092 1604 aaPredicted RBP10.98□□□□□ -0.65
LINC02449-202ENST00000399866 MRC1P22897 1456 aa10.98□□□□□ -0.65
LINC02449-202ENST00000399866 PHLPP1O60346 1717 aa10.98□□□□□ -0.65
LINC02449-202ENST00000399866 COL14A1Q05707 1796 aaKnown RBP10.98□□□□□ -0.65
LINC02449-202ENST00000399866 TEFQ10587 303 aa10.97□□□□□ -0.65
LINC02449-202ENST00000399866 MPRIPQ6WCQ1 1025 aa10.97□□□□□ -0.65
LINC02449-202ENST00000399866 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.97□□□□□ -0.65
LINC02449-202ENST00000399866 SPG7Q9UQ90 795 aa10.97□□□□□ -0.65
LINC02449-202ENST00000399866 PCDHB15Q9Y5E8 787 aa10.97□□□□□ -0.65
LINC02449-202ENST00000399866 KDM6AO15550 1401 aaPredicted RBP10.97□□□□□ -0.65
LINC02449-202ENST00000399866 SCN11AQ9UI33 1791 aa10.97□□□□□ -0.65
LINC02449-202ENST00000399866 PTPRCP08575 1304 aa10.96□□□□□ -0.65
LINC02449-202ENST00000399866 IGHDP01880 384 aa10.96□□□□□ -0.65
LINC02449-202ENST00000399866 PHKG2P15735 406 aa10.95□□□□□ -0.66
LINC02449-202ENST00000399866 ZBTB40Q9NUA8 1239 aa10.95□□□□□ -0.66
LINC02449-202ENST00000399866 EIF4A1P60842 406 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms