RNA–Protein interactions for RNA: ENST00000399586.2

TTC3P1-201, Transcript of tetratricopeptide repeat domain 3 pseudogene 1, humanhuman

BASIC

Gene TTC3P1, Length 6,081 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P1-201ENST00000399586 PPP1R12BO60237 982 aaPredicted RBP9.55□□□□□ -0.88
TTC3P1-201ENST00000399586 CCDC96Q2M329 555 aa9.55□□□□□ -0.88
TTC3P1-201ENST00000399586 CCDC150Q8NCX0 1101 aa9.55□□□□□ -0.88
TTC3P1-201ENST00000399586 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.55□□□□□ -0.88
TTC3P1-201ENST00000399586 ANKIB1Q9P2G1 1089 aa9.55□□□□□ -0.88
TTC3P1-201ENST00000399586 MINDY4BA8MYZ0 360 aa9.55□□□□□ -0.88
TTC3P1-201ENST00000399586 ZNF397Q8NF99 534 aaPredicted RBP9.55□□□□□ -0.88
TTC3P1-201ENST00000399586 DDX11Q96FC9 970 aa9.55□□□□□ -0.88
TTC3P1-201ENST00000399586 MTHFSP49914 203 aa9.55□□□□□ -0.88
TTC3P1-201ENST00000399586 MRE11P49959 708 aa9.55□□□□□ -0.88
TTC3P1-201ENST00000399586 ZSCAN25Q6NSZ9 544 aa9.55□□□□□ -0.88
TTC3P1-201ENST00000399586 GAS2L2Q8NHY3 880 aa9.55□□□□□ -0.88
TTC3P1-201ENST00000399586 PPM1EQ8WY54 764 aa9.55□□□□□ -0.88
TTC3P1-201ENST00000399586 SPTY2D1Q68D10 685 aaPredicted RBP9.55□□□□□ -0.88
TTC3P1-201ENST00000399586 CWC27Q6UX04 472 aaKnown RBP9.55□□□□□ -0.88
TTC3P1-201ENST00000399586 PUF60Q9UHX1 559 aaKnown RBP9.55□□□□□ -0.88
TTC3P1-201ENST00000399586 IGHMBP2P38935 993 aaKnown RBP9.55□□□□□ -0.88
TTC3P1-201ENST00000399586 CAMK4Q16566 473 aa9.55□□□□□ -0.88
TTC3P1-201ENST00000399586 HDGFL1Q5TGJ6 251 aa9.55□□□□□ -0.88
TTC3P1-201ENST00000399586 KLHL10Q6JEL2 608 aa9.55□□□□□ -0.88
TTC3P1-201ENST00000399586 USP47Q96K76 1375 aa9.54□□□□□ -0.88
TTC3P1-201ENST00000399586 FILIP1Q7Z7B0 1213 aa9.54□□□□□ -0.88
TTC3P1-201ENST00000399586 IFFO1Q0D2I5 559 aa9.54□□□□□ -0.88
TTC3P1-201ENST00000399586 CCDC148Q8NFR7 591 aa9.54□□□□□ -0.88
TTC3P1-201ENST00000399586 SPATA32Q96LK8 384 aa9.54□□□□□ -0.88
TTC3P1-201ENST00000399586 HOOK3Q86VS8 718 aa9.54□□□□□ -0.88
TTC3P1-201ENST00000399586 MKNK2Q9HBH9 465 aa9.54□□□□□ -0.88
TTC3P1-201ENST00000399586 NOB1Q9ULX3 412 aaKnown RBP9.54□□□□□ -0.88
TTC3P1-201ENST00000399586 MAP3K9P80192 1104 aa9.53□□□□□ -0.88
TTC3P1-201ENST00000399586 CCDC82Q8N4S0 544 aa9.53□□□□□ -0.88
TTC3P1-201ENST00000399586 AIDAQ96BJ3 306 aa9.53□□□□□ -0.88
TTC3P1-201ENST00000399586 SSX2IPQ9Y2D8 614 aa9.53□□□□□ -0.88
TTC3P1-201ENST00000399586 USP8P40818 1118 aa9.53□□□□□ -0.88
TTC3P1-201ENST00000399586 CBX1P83916 185 aa9.53□□□□□ -0.88
TTC3P1-201ENST00000399586 TWISTNBQ3B726 338 aaPredicted RBP9.53□□□□□ -0.88
TTC3P1-201ENST00000399586 CACNA2D4Q7Z3S7 1137 aa9.53□□□□□ -0.88
TTC3P1-201ENST00000399586 PRKAR2BP31323 418 aa9.53□□□□□ -0.88
TTC3P1-201ENST00000399586 ARHGAP29Q52LW3 1261 aa9.53□□□□□ -0.88
TTC3P1-201ENST00000399586 SPA17Q15506 151 aa9.53□□□□□ -0.88
TTC3P1-201ENST00000399586 MMRN2Q9H8L6 949 aa9.53□□□□□ -0.88
TTC3P1-201ENST00000399586 DHX57Q6P158 1386 aaKnown RBP9.53□□□□□ -0.88
TTC3P1-201ENST00000399586 CECR2Q9BXF3 1484 aa9.53□□□□□ -0.88
TTC3P1-201ENST00000399586 LMAN1P49257 510 aa9.53□□□□□ -0.88
TTC3P1-201ENST00000399586 UPF3BQ9BZI7 483 aaKnown RBP9.53□□□□□ -0.88
TTC3P1-201ENST00000399586 BCAR3O75815 825 aa9.52□□□□□ -0.88
TTC3P1-201ENST00000399586 TMCO3Q6UWJ1 677 aa9.52□□□□□ -0.88
TTC3P1-201ENST00000399586 APBB1IPQ7Z5R6 666 aaPredicted RBP9.52□□□□□ -0.88
TTC3P1-201ENST00000399586 JAKMIP1Q96N16 626 aaKnown RBP9.52□□□□□ -0.88
TTC3P1-201ENST00000399586 PDRG1Q9NUG6 133 aa9.52□□□□□ -0.88
TTC3P1-201ENST00000399586 SPG7Q9UQ90 795 aa9.52□□□□□ -0.88
TTC3P1-201ENST00000399586 CDKL5O76039 1030 aa9.52□□□□□ -0.89
TTC3P1-201ENST00000399586 RBM25P49756 843 aaKnown RBP9.52□□□□□ -0.89
TTC3P1-201ENST00000399586 CFAP100Q494V2 611 aa9.52□□□□□ -0.89
TTC3P1-201ENST00000399586 FHOD3Q2V2M9 1422 aa9.52□□□□□ -0.89
TTC3P1-201ENST00000399586 MBD3O95983 291 aa9.52□□□□□ -0.89
TTC3P1-201ENST00000399586 FERP16591 822 aa9.52□□□□□ -0.89
TTC3P1-201ENST00000399586 EXOSC9Q06265 439 aaKnown RBP9.52□□□□□ -0.89
TTC3P1-201ENST00000399586 ANKRD1Q15327 319 aa9.52□□□□□ -0.89
TTC3P1-201ENST00000399586 TSG101Q99816 390 aa9.52□□□□□ -0.89
TTC3P1-201ENST00000399586 CCDC18Q5T9S5 1454 aa9.52□□□□□ -0.89
TTC3P1-201ENST00000399586 MIA2Q96PC5 1412 aa9.52□□□□□ -0.89
TTC3P1-201ENST00000399586 ZPR1O75312 459 aa9.52□□□□□ -0.89
TTC3P1-201ENST00000399586 ZNF530Q6P9A1 599 aaPredicted RBP9.52□□□□□ -0.89
TTC3P1-201ENST00000399586 AEBP1Q8IUX7 1158 aa9.52□□□□□ -0.89
TTC3P1-201ENST00000399586 CUL5Q93034 780 aa9.52□□□□□ -0.89
TTC3P1-201ENST00000399586 LUZP1Q86V48 1076 aa9.52□□□□□ -0.89
TTC3P1-201ENST00000399586 TSR2Q969E8 191 aaKnown RBP9.52□□□□□ -0.89
TTC3P1-201ENST00000399586 RNF187Q5TA31 235 aaPredicted RBP9.51□□□□□ -0.89
TTC3P1-201ENST00000399586 TXNDC2Q86VQ3 553 aa9.51□□□□□ -0.89
TTC3P1-201ENST00000399586 PRKRIP1Q9H875 184 aaPredicted RBP9.51□□□□□ -0.89
TTC3P1-201ENST00000399586 KRT85P78386 507 aa9.51□□□□□ -0.89
TTC3P1-201ENST00000399586 JPH4Q96JJ6 628 aa9.51□□□□□ -0.89
TTC3P1-201ENST00000399586 RAD54L2Q9Y4B4 1467 aa9.51□□□□□ -0.89
TTC3P1-201ENST00000399586 BTBD11A6QL63 1104 aa9.51□□□□□ -0.89
TTC3P1-201ENST00000399586 RGS22Q8NE09 1264 aa9.51□□□□□ -0.89
TTC3P1-201ENST00000399586 TERF1P54274 439 aa9.51□□□□□ -0.89
TTC3P1-201ENST00000399586 PRPF4BQ13523 1007 aaKnown RBP9.51□□□□□ -0.89
TTC3P1-201ENST00000399586 PDZRN3Q9UPQ7 1066 aa9.51□□□□□ -0.89
TTC3P1-201ENST00000399586 METTL24Q5JXM2 366 aa9.51□□□□□ -0.89
TTC3P1-201ENST00000399586 IL1RAPL2Q9NP60 686 aa9.51□□□□□ -0.89
TTC3P1-201ENST00000399586 SAMM50Q9Y512 469 aa9.51□□□□□ -0.89
TTC3P1-201ENST00000399586 CPLX3Q8WVH0 158 aa9.5□□□□□ -0.89
TTC3P1-201ENST00000399586 SULT6B1Q6IMI4 303 aa9.5□□□□□ -0.89
TTC3P1-201ENST00000399586 BLOC1S2Q6QNY1 142 aa9.5□□□□□ -0.89
TTC3P1-201ENST00000399586 DZIP1Q86YF9 867 aaKnown RBP9.5□□□□□ -0.89
TTC3P1-201ENST00000399586 OTUD6BQ8N6M0 293 aa9.5□□□□□ -0.89
TTC3P1-201ENST00000399586 CRACR2AQ9BSW2 395 aa9.5□□□□□ -0.89
TTC3P1-201ENST00000399586 ZMYND15Q9H091 742 aa9.5□□□□□ -0.89
TTC3P1-201ENST00000399586 UQCRHLA0A096LP55 91 aa9.5□□□□□ -0.89
TTC3P1-201ENST00000399586 UQCRHP07919 91 aa9.5□□□□□ -0.89
TTC3P1-201ENST00000399586 FKBP15Q5T1M5 1219 aa9.5□□□□□ -0.89
TTC3P1-201ENST00000399586 TDRD12Q587J7 1177 aaKnown RBP9.5□□□□□ -0.89
TTC3P1-201ENST00000399586 CEP126Q9P2H0 1117 aa9.5□□□□□ -0.89
TTC3P1-201ENST00000399586 RANBP6O60518 1105 aaKnown RBP9.49□□□□□ -0.89
TTC3P1-201ENST00000399586 GUCY1B3Q02153 619 aa9.49□□□□□ -0.89
TTC3P1-201ENST00000399586 TSNARE1Q96NA8 513 aa9.49□□□□□ -0.89
TTC3P1-201ENST00000399586 VAT1LQ9HCJ6 419 aa9.49□□□□□ -0.89
TTC3P1-201ENST00000399586 ZBED9Q6R2W3 1325 aa9.49□□□□□ -0.89
TTC3P1-201ENST00000399586 ZWINTO95229 277 aa9.49□□□□□ -0.89
TTC3P1-201ENST00000399586 KIF20AO95235 890 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms