RNA–Protein interactions for RNA: ENST00000399273.5

CCDC144A-206, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC144A, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-206ENST00000399273 SULT6B1Q6IMI4 303 aa13.63□□□□□ -0.23
CCDC144A-206ENST00000399273 MTERF4Q7Z6M4 381 aaKnown RBP13.63□□□□□ -0.23
CCDC144A-206ENST00000399273 CUL5Q93034 780 aa13.63□□□□□ -0.23
CCDC144A-206ENST00000399273 MPHOSPH6Q99547 160 aaKnown RBP13.63□□□□□ -0.23
CCDC144A-206ENST00000399273 BCL11BQ9C0K0 894 aaPredicted RBP13.63□□□□□ -0.23
CCDC144A-206ENST00000399273 KIF14Q15058 1648 aa13.63□□□□□ -0.23
CCDC144A-206ENST00000399273 AACSQ86V21 672 aa13.63□□□□□ -0.23
CCDC144A-206ENST00000399273 AIDAQ96BJ3 306 aa13.63□□□□□ -0.23
CCDC144A-206ENST00000399273 TNMDQ9H2S6 317 aa13.63□□□□□ -0.23
CCDC144A-206ENST00000399273 RAD54L2Q9Y4B4 1467 aa13.63□□□□□ -0.23
CCDC144A-206ENST00000399273 AKAP2Q9Y2D5 859 aa13.62□□□□□ -0.23
CCDC144A-206ENST00000399273 STK3Q13188 491 aa13.62□□□□□ -0.23
CCDC144A-206ENST00000399273 KIAA0754O94854 1291 aa13.62□□□□□ -0.23
CCDC144A-206ENST00000399273 KRT32Q14532 448 aa13.62□□□□□ -0.23
CCDC144A-206ENST00000399273 FIBPO43427 364 aa13.62□□□□□ -0.23
CCDC144A-206ENST00000399273 POLR3DP05423 398 aaPredicted RBP13.62□□□□□ -0.23
CCDC144A-206ENST00000399273 CENPHQ9H3R5 247 aa13.62□□□□□ -0.23
CCDC144A-206ENST00000399273 TMOD3Q9NYL9 352 aa13.62□□□□□ -0.23
CCDC144A-206ENST00000399273 TAX1BP1Q86VP1 789 aa13.62□□□□□ -0.23
CCDC144A-206ENST00000399273 WDR78Q5VTH9 848 aa13.62□□□□□ -0.23
CCDC144A-206ENST00000399273 DZIP1Q86YF9 867 aaKnown RBP13.62□□□□□ -0.23
CCDC144A-206ENST00000399273 SLC52A1Q9NWF4 448 aa13.61□□□□□ -0.23
CCDC144A-206ENST00000399273 FAM135AQ9P2D6 1515 aa13.61□□□□□ -0.23
CCDC144A-206ENST00000399273 IMMTQ16891 758 aaKnown RBP13.61□□□□□ -0.23
CCDC144A-206ENST00000399273 EFCAB5A4FU69 1503 aa13.61□□□□□ -0.23
CCDC144A-206ENST00000399273 CAVIN1Q6NZI2 390 aaKnown RBP13.61□□□□□ -0.23
CCDC144A-206ENST00000399273 MKNK2Q9HBH9 465 aa13.61□□□□□ -0.23
CCDC144A-206ENST00000399273 KRT85P78386 507 aa13.61□□□□□ -0.23
CCDC144A-206ENST00000399273 KCNH5Q8NCM2 988 aa13.61□□□□□ -0.23
CCDC144A-206ENST00000399273 C9orf84Q5VXU9 1444 aa13.61□□□□□ -0.23
CCDC144A-206ENST00000399273 ABCF2Q9UG63 623 aa13.61□□□□□ -0.23
CCDC144A-206ENST00000399273 NCOA2Q15596 1464 aa13.61□□□□□ -0.23
CCDC144A-206ENST00000399273 PRG4Q92954 1404 aaPredicted RBP13.6□□□□□ -0.23
CCDC144A-206ENST00000399273 KIAA1328Q86T90 577 aa13.6□□□□□ -0.23
CCDC144A-206ENST00000399273 NOB1Q9ULX3 412 aaKnown RBP13.6□□□□□ -0.23
CCDC144A-206ENST00000399273 LRRC9Q6ZRR7 1453 aa13.6□□□□□ -0.23
CCDC144A-206ENST00000399273 GRIPAP1Q4V328 841 aa13.6□□□□□ -0.23
CCDC144A-206ENST00000399273 SPINK5Q9NQ38 1064 aaPredicted RBP13.6□□□□□ -0.23
CCDC144A-206ENST00000399273 PDIA4P13667 645 aaKnown RBP13.6□□□□□ -0.23
CCDC144A-206ENST00000399273 METTL24Q5JXM2 366 aa13.6□□□□□ -0.23
CCDC144A-206ENST00000399273 RAB34Q9BZG1 259 aa13.6□□□□□ -0.23
CCDC144A-206ENST00000399273 EIF3JO75822 258 aaKnown RBP13.59□□□□□ -0.23
CCDC144A-206ENST00000399273 IDH1O75874 414 aaKnown RBP13.59□□□□□ -0.23
CCDC144A-206ENST00000399273 BLOC1S2Q6QNY1 142 aa13.59□□□□□ -0.23
CCDC144A-206ENST00000399273 INCENPQ9NQS7 918 aa13.59□□□□□ -0.23
CCDC144A-206ENST00000399273 WDR33Q9C0J8 1336 aaKnown RBP13.59□□□□□ -0.23
CCDC144A-206ENST00000399273 HFM1A2PYH4 1435 aa13.59□□□□□ -0.23
CCDC144A-206ENST00000399273 EPB41L2O43491 1005 aaKnown RBP13.59□□□□□ -0.23
CCDC144A-206ENST00000399273 TCP11L2Q8N4U5 519 aa13.59□□□□□ -0.23
CCDC144A-206ENST00000399273 AQRO60306 1485 aaKnown RBP eCLIP13.59□□□□□ -0.23
CCDC144A-206ENST00000399273 TSG101Q99816 390 aa13.59□□□□□ -0.23
CCDC144A-206ENST00000399273 MRC2Q9UBG0 1479 aa13.59□□□□□ -0.23
CCDC144A-206ENST00000399273 STAMBPO95630 424 aa13.58□□□□□ -0.23
CCDC144A-206ENST00000399273 C1orf115Q9H7X2 142 aa13.58□□□□□ -0.23
CCDC144A-206ENST00000399273 ERBINQ96RT1 1412 aa13.58□□□□□ -0.24
CCDC144A-206ENST00000399273 SETD1BQ9UPS6 1966 aaKnown RBP13.58□□□□□ -0.24
CCDC144A-206ENST00000399273 FGFR1OPO95684 399 aaKnown RBP13.58□□□□□ -0.24
CCDC144A-206ENST00000399273 RNF214Q8ND24 703 aa13.58□□□□□ -0.24
CCDC144A-206ENST00000399273 PLCD4Q9BRC7 762 aa13.58□□□□□ -0.24
CCDC144A-206ENST00000399273 GNAT3A8MTJ3 354 aa13.58□□□□□ -0.24
CCDC144A-206ENST00000399273 ERLIN1O75477 346 aa13.58□□□□□ -0.24
CCDC144A-206ENST00000399273 EIF5P55010 431 aaKnown RBP13.58□□□□□ -0.24
CCDC144A-206ENST00000399273 VPS36Q86VN1 386 aa13.58□□□□□ -0.24
CCDC144A-206ENST00000399273 LRRFIP2Q9Y608 721 aaKnown RBP13.58□□□□□ -0.24
CCDC144A-206ENST00000399273 TAF4BQ92750 862 aa13.58□□□□□ -0.24
CCDC144A-206ENST00000399273 U3KPZ7 1027 aaPredicted RBP13.58□□□□□ -0.24
CCDC144A-206ENST00000399273 LARP1BQ659C4 914 aaKnown RBP13.57□□□□□ -0.24
CCDC144A-206ENST00000399273 PIBF1Q8WXW3 757 aa13.57□□□□□ -0.24
CCDC144A-206ENST00000399273 FEZ1Q99689 392 aa13.57□□□□□ -0.24
CCDC144A-206ENST00000399273 SRGAP3O43295 1099 aa13.57□□□□□ -0.24
CCDC144A-206ENST00000399273 HMGN5P82970 282 aaKnown RBP13.57□□□□□ -0.24
CCDC144A-206ENST00000399273 LRPPRCP42704 1394 aaKnown RBP13.57□□□□□ -0.24
CCDC144A-206ENST00000399273 CCDC196A0A1B0GTZ2 297 aa13.57□□□□□ -0.24
CCDC144A-206ENST00000399273 MAP4K4O95819 1239 aaPredicted RBP13.57□□□□□ -0.24
CCDC144A-206ENST00000399273 SPC24Q8NBT2 197 aa13.57□□□□□ -0.24
CCDC144A-206ENST00000399273 DAPK1P53355 1430 aa13.57□□□□□ -0.24
CCDC144A-206ENST00000399273 CASKIN1Q8WXD9 1431 aa13.57□□□□□ -0.24
CCDC144A-206ENST00000399273 ATF7IPQ6VMQ6 1270 aa13.57□□□□□ -0.24
CCDC144A-206ENST00000399273 HOMER2Q9NSB8 354 aa13.57□□□□□ -0.24
CCDC144A-206ENST00000399273 IFIT1P09914 478 aaKnown RBP13.57□□□□□ -0.24
CCDC144A-206ENST00000399273 TSHZ2Q9NRE2 1034 aa13.57□□□□□ -0.24
CCDC144A-206ENST00000399273 MRE11P49959 708 aa13.56□□□□□ -0.24
CCDC144A-206ENST00000399273 HSP90AB3PQ58FF7 597 aa13.56□□□□□ -0.24
CCDC144A-206ENST00000399273 ATAD2Q6PL18 1390 aa13.56□□□□□ -0.24
CCDC144A-206ENST00000399273 CCDC66A2RUB6 948 aa13.56□□□□□ -0.24
CCDC144A-206ENST00000399273 CCDC96Q2M329 555 aa13.56□□□□□ -0.24
CCDC144A-206ENST00000399273 SLC26A8Q96RN1 970 aa13.56□□□□□ -0.24
CCDC144A-206ENST00000399273 SMTNL1A8MU46 457 aa13.56□□□□□ -0.24
CCDC144A-206ENST00000399273 TMEM266Q2M3C6 531 aa13.56□□□□□ -0.24
CCDC144A-206ENST00000399273 FERMT2Q96AC1 680 aa13.56□□□□□ -0.24
CCDC144A-206ENST00000399273 NFKBIBQ15653 356 aa13.56□□□□□ -0.24
CCDC144A-206ENST00000399273 MYO1BO43795 1136 aa13.55□□□□□ -0.24
CCDC144A-206ENST00000399273 PABPN1LA6NDY0 278 aaKnown RBP13.55□□□□□ -0.24
CCDC144A-206ENST00000399273 ZNF428Q96B54 188 aa13.55□□□□□ -0.24
CCDC144A-206ENST00000399273 CABP1Q9NZU7 370 aa13.55□□□□□ -0.24
CCDC144A-206ENST00000399273 GIGYF2Q6Y7W6 1299 aaKnown RBP13.55□□□□□ -0.24
CCDC144A-206ENST00000399273 PRPF40AO75400 957 aaKnown RBP13.55□□□□□ -0.24
CCDC144A-206ENST00000399273 C16orf71Q8IYS4 520 aaPredicted RBP13.55□□□□□ -0.24
CCDC144A-206ENST00000399273 ZNF444Q8N0Y2 327 aaPredicted RBP13.55□□□□□ -0.24
CCDC144A-206ENST00000399273 CC2D2AQ9P2K1 1620 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms