RNA–Protein interactions for RNA: ENST00000399237.6

RUNX1-204, Transcript of runt related transcription factor 1, humanhuman

TSL 5

Gene RUNX1, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-204ENST00000399237 SMG6Q86US8 1419 aaKnown RBP29.53■■■□□ 2.32
RUNX1-204ENST00000399237 PROM2Q8N271 834 aa29.52■■■□□ 2.32
RUNX1-204ENST00000399237 POLKQ9UBT6 870 aa29.52■■■□□ 2.32
RUNX1-204ENST00000399237 NCAPD2Q15021 1401 aa29.52■■■□□ 2.32
RUNX1-204ENST00000399237 SPON1Q9HCB6 807 aa29.5■■■□□ 2.31
RUNX1-204ENST00000399237 TNNT2P45379 298 aaPredicted RBP29.49■■■□□ 2.31
RUNX1-204ENST00000399237 DDX54Q8TDD1 881 aaKnown RBP29.48■■■□□ 2.31
RUNX1-204ENST00000399237 WASHC2AQ641Q2 1341 aa29.47■■■□□ 2.31
RUNX1-204ENST00000399237 PPM1GO15355 546 aaPredicted RBP29.47■■■□□ 2.31
RUNX1-204ENST00000399237 TXNRD1Q16881 649 aa29.47■■■□□ 2.31
RUNX1-204ENST00000399237 PKD1L3Q7Z443 1732 aa29.47■■■□□ 2.31
RUNX1-204ENST00000399237 PPP1R1BQ9UD71 204 aaPredicted RBP29.46■■■□□ 2.31
RUNX1-204ENST00000399237 NSD2O96028 1365 aa29.46■■■□□ 2.31
RUNX1-204ENST00000399237 ZCRB1Q8TBF4 217 aaKnown RBP29.44■■■□□ 2.3
RUNX1-204ENST00000399237 KAT6BQ8WYB5 2073 aa29.43■■■□□ 2.3
RUNX1-204ENST00000399237 PDGFDQ9GZP0 370 aaPredicted RBP29.43■■■□□ 2.3
RUNX1-204ENST00000399237 TOGARAM1Q9Y4F4 1720 aa29.42■■■□□ 2.3
RUNX1-204ENST00000399237 PAPPAQ13219 1627 aa29.42■■■□□ 2.3
RUNX1-204ENST00000399237 AMER1Q5JTC6 1135 aaPredicted RBP29.4■■■□□ 2.3
RUNX1-204ENST00000399237 STK32BQ9NY57 414 aa29.4■■■□□ 2.3
RUNX1-204ENST00000399237 CASZ1Q86V15 1759 aa29.39■■■□□ 2.3
RUNX1-204ENST00000399237 RAPGEF4Q8WZA2 1011 aa29.39■■■□□ 2.3
RUNX1-204ENST00000399237 EYA1Q99502 592 aa29.39■■■□□ 2.3
RUNX1-204ENST00000399237 EIF4A2Q14240 407 aaKnown RBP29.38■■■□□ 2.29
RUNX1-204ENST00000399237 PER1O15534 1290 aaPredicted RBP29.37■■■□□ 2.29
RUNX1-204ENST00000399237 ZBTB7AO95365 584 aa29.37■■■□□ 2.29
RUNX1-204ENST00000399237 TATP17735 454 aaPredicted RBP29.37■■■□□ 2.29
RUNX1-204ENST00000399237 SLC15A2Q16348 729 aa29.37■■■□□ 2.29
RUNX1-204ENST00000399237 KNSTRNQ9Y448 316 aa29.36■■■□□ 2.29
RUNX1-204ENST00000399237 LY75O60449 1722 aa29.35■■■□□ 2.29
RUNX1-204ENST00000399237 MORC1Q86VD1 984 aa29.35■■■□□ 2.29
RUNX1-204ENST00000399237 CYP27B1O15528 508 aa29.33■■■□□ 2.29
RUNX1-204ENST00000399237 PRIM1P49642 420 aaKnown RBP29.33■■■□□ 2.29
RUNX1-204ENST00000399237 ITGB4P16144 1822 aa29.31■■■□□ 2.28
RUNX1-204ENST00000399237 PCDH11XQ9BZA7 1347 aa29.3■■■□□ 2.28
RUNX1-204ENST00000399237 PCDH11YQ9BZA8 1340 aa29.3■■■□□ 2.28
RUNX1-204ENST00000399237 LRRC4BQ9NT99 713 aa29.3■■■□□ 2.28
RUNX1-204ENST00000399237 ATF5Q9Y2D1 282 aaPredicted RBP29.3■■■□□ 2.28
RUNX1-204ENST00000399237 IGSF1Q8N6C5 1336 aa29.29■■■□□ 2.28
RUNX1-204ENST00000399237 SYTL4Q96C24 671 aaPredicted RBP29.29■■■□□ 2.28
RUNX1-204ENST00000399237 PTGER2P43116 358 aa29.28■■■□□ 2.28
RUNX1-204ENST00000399237 TUBGCP6Q96RT7 1819 aa29.26■■■□□ 2.27
RUNX1-204ENST00000399237 ZNF827Q17R98 1081 aa29.25■■■□□ 2.27
RUNX1-204ENST00000399237 MTFR1LQ9H019 292 aa29.24■■■□□ 2.27
RUNX1-204ENST00000399237 KCNQ4P56696 695 aa29.23■■■□□ 2.27
RUNX1-204ENST00000399237 CC2D1BQ5T0F9 858 aaKnown RBP29.23■■■□□ 2.27
RUNX1-204ENST00000399237 DCAF8L1A6NGE4 600 aa29.2■■■□□ 2.26
RUNX1-204ENST00000399237 AEBP1Q8IUX7 1158 aa29.2■■■□□ 2.26
RUNX1-204ENST00000399237 YY1P25490 414 aa29.19■■■□□ 2.26
RUNX1-204ENST00000399237 NKX1-1Q15270 411 aaPredicted RBP29.19■■■□□ 2.26
RUNX1-204ENST00000399237 QSER1Q2KHR3 1735 aa29.19■■■□□ 2.26
RUNX1-204ENST00000399237 NPC1L1Q9UHC9 1359 aa29.18■■■□□ 2.26
RUNX1-204ENST00000399237 IL13P35225 146 aa29.18■■■□□ 2.26
RUNX1-204ENST00000399237 SLC27A3Q5K4L6 730 aa29.18■■■□□ 2.26
RUNX1-204ENST00000399237 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.18■■■□□ 2.26
RUNX1-204ENST00000399237 SPG7Q9UQ90 795 aa29.18■■■□□ 2.26
RUNX1-204ENST00000399237 SGIP1Q9BQI5 828 aa29.17■■■□□ 2.26
RUNX1-204ENST00000399237 TAF1LQ8IZX4 1826 aa29.16■■■□□ 2.26
RUNX1-204ENST00000399237 PHKG2P15735 406 aa29.16■■■□□ 2.26
RUNX1-204ENST00000399237 MTHFSP49914 203 aa29.16■■■□□ 2.26
RUNX1-204ENST00000399237 FHDC1Q9C0D6 1143 aaPredicted RBP29.16■■■□□ 2.26
RUNX1-204ENST00000399237 COL3A1P02461 1466 aaPredicted RBP29.16■■■□□ 2.26
RUNX1-204ENST00000399237 C5P01031 1676 aa29.15■■■□□ 2.26
RUNX1-204ENST00000399237 PLEKHG2Q9H7P9 1386 aa29.15■■■□□ 2.26
RUNX1-204ENST00000399237 CNGB1Q14028 1251 aaPredicted RBP29.15■■■□□ 2.26
RUNX1-204ENST00000399237 AKT1S1Q96B36 256 aa29.15■■■□□ 2.26
RUNX1-204ENST00000399237 KDRP35968 1356 aa29.14■■■□□ 2.26
RUNX1-204ENST00000399237 MPRIPQ6WCQ1 1025 aa29.13■■■□□ 2.25
RUNX1-204ENST00000399237 SYT17Q9BSW7 474 aa29.12■■■□□ 2.25
RUNX1-204ENST00000399237 PIGBQ92521 554 aa29.11■■■□□ 2.25
RUNX1-204ENST00000399237 PALLDQ8WX93 1383 aa29.11■■■□□ 2.25
RUNX1-204ENST00000399237 IFNL2Q8IZJ0 200 aa29.1■■■□□ 2.25
RUNX1-204ENST00000399237 ARXQ96QS3 562 aa29.1■■■□□ 2.25
RUNX1-204ENST00000399237 KDM6AO15550 1401 aaPredicted RBP29.1■■■□□ 2.25
RUNX1-204ENST00000399237 UTRNP46939 3433 aa29.1■■■□□ 2.25
RUNX1-204ENST00000399237 SULT6B1Q6IMI4 303 aa29.09■■■□□ 2.25
RUNX1-204ENST00000399237 TFCP2L1Q9NZI6 479 aa29.09■■■□□ 2.25
RUNX1-204ENST00000399237 CCNL1Q9UK58 526 aaPredicted RBP29.09■■■□□ 2.25
RUNX1-204ENST00000399237 PNPLA7Q6ZV29 1317 aa29.09■■■□□ 2.25
RUNX1-204ENST00000399237 COL24A1Q17RW2 1714 aa29.06■■■□□ 2.24
RUNX1-204ENST00000399237 C4BP0C0L5 1744 aa29.03■■■□□ 2.24
RUNX1-204ENST00000399237 PLEKHO1Q53GL0 409 aaPredicted RBP29.03■■■□□ 2.24
RUNX1-204ENST00000399237 ZNF530Q6P9A1 599 aaPredicted RBP29.03■■■□□ 2.24
RUNX1-204ENST00000399237 SLC16A10Q8TF71 515 aa29.03■■■□□ 2.24
RUNX1-204ENST00000399237 VIRMAQ69YN4 1812 aaKnown RBP29.02■■■□□ 2.24
RUNX1-204ENST00000399237 SCN11AQ9UI33 1791 aa29.02■■■□□ 2.24
RUNX1-204ENST00000399237 HMOX1P09601 288 aa29.01■■■□□ 2.23
RUNX1-204ENST00000399237 ASAP1Q9ULH1 1129 aa29.01■■■□□ 2.23
RUNX1-204ENST00000399237 TMOD3Q9NYL9 352 aa29■■■□□ 2.23
RUNX1-204ENST00000399237 MAP3K5Q99683 1374 aa29■■■□□ 2.23
RUNX1-204ENST00000399237 DIAPH1O60610 1272 aaKnown RBP28.99■■■□□ 2.23
RUNX1-204ENST00000399237 POLD1P28340 1107 aa28.99■■■□□ 2.23
RUNX1-204ENST00000399237 AMOTQ4VCS5 1084 aa28.99■■■□□ 2.23
RUNX1-204ENST00000399237 UBR3Q6ZT12 1888 aa28.98■■■□□ 2.23
RUNX1-204ENST00000399237 KLHL34Q8N239 644 aa28.98■■■□□ 2.23
RUNX1-204ENST00000399237 AMIGO3Q86WK7 504 aa28.97■■■□□ 2.23
RUNX1-204ENST00000399237 DCAF5Q96JK2 942 aa28.97■■■□□ 2.23
RUNX1-204ENST00000399237 ATG3Q9NT62 314 aa28.97■■■□□ 2.23
RUNX1-204ENST00000399237 ADAMTS7Q9UKP4 1686 aa28.96■■■□□ 2.23
RUNX1-204ENST00000399237 SMARCC1Q92922 1105 aaPredicted RBP28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms