RNA–Protein interactions for RNA: ENST00000399177.7

CCDC178-203, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC178, Length 1,017 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-203ENST00000399177 CCDC155Q8N6L0 562 aa9.57□□□□□ -0.88
CCDC178-203ENST00000399177 ADD1P35611 737 aaKnown RBP9.56□□□□□ -0.88
CCDC178-203ENST00000399177 SLFNL1Q499Z3 407 aa9.56□□□□□ -0.88
CCDC178-203ENST00000399177 LCE2CQ5TA81 110 aa9.56□□□□□ -0.88
CCDC178-203ENST00000399177 TBC1D2BQ9UPU7 963 aa9.56□□□□□ -0.88
CCDC178-203ENST00000399177 VSIG8P0DPA2 414 aa9.55□□□□□ -0.88
CCDC178-203ENST00000399177 ABL2P42684 1182 aa9.55□□□□□ -0.88
CCDC178-203ENST00000399177 RNF217Q8TC41 542 aa9.55□□□□□ -0.88
CCDC178-203ENST00000399177 ERVK-9P63128 1117 aa9.54□□□□□ -0.88
CCDC178-203ENST00000399177 WASHC4Q2M389 1173 aa9.54□□□□□ -0.88
CCDC178-203ENST00000399177 PRICKLE2Q7Z3G6 844 aa9.54□□□□□ -0.88
CCDC178-203ENST00000399177 FOXR1Q6PIV2 292 aa9.53□□□□□ -0.88
CCDC178-203ENST00000399177 SV2AQ7L0J3 742 aa9.53□□□□□ -0.88
CCDC178-203ENST00000399177 SIRT1Q96EB6 747 aa9.53□□□□□ -0.88
CCDC178-203ENST00000399177 A0A1W2PRU2 124 aa9.52□□□□□ -0.89
CCDC178-203ENST00000399177 ITGA6P23229 1130 aa9.52□□□□□ -0.89
CCDC178-203ENST00000399177 GPC1P35052 558 aa9.52□□□□□ -0.89
CCDC178-203ENST00000399177 CEP126Q9P2H0 1117 aa9.52□□□□□ -0.89
CCDC178-203ENST00000399177 RAD21O60216 631 aa9.51□□□□□ -0.89
CCDC178-203ENST00000399177 RNF144AP50876 292 aaPredicted RBP9.51□□□□□ -0.89
CCDC178-203ENST00000399177 SEMA3FQ13275 785 aa9.51□□□□□ -0.89
CCDC178-203ENST00000399177 RNF135Q8IUD6 432 aa9.51□□□□□ -0.89
CCDC178-203ENST00000399177 GDPD2Q9HCC8 539 aa9.51□□□□□ -0.89
CCDC178-203ENST00000399177 SLC35F4A4IF30 521 aa9.5□□□□□ -0.89
CCDC178-203ENST00000399177 USP4Q13107 963 aa9.5□□□□□ -0.89
CCDC178-203ENST00000399177 DOLKQ9UPQ8 538 aa9.5□□□□□ -0.89
CCDC178-203ENST00000399177 ESCO1Q5FWF5 840 aa9.49□□□□□ -0.89
CCDC178-203ENST00000399177 FOXD4L5Q5VV16 416 aaPredicted RBP9.49□□□□□ -0.89
CCDC178-203ENST00000399177 RIPOR1Q6ZS17 1223 aa9.49□□□□□ -0.89
CCDC178-203ENST00000399177 VWA5B2Q8N398 1253 aa9.49□□□□□ -0.89
CCDC178-203ENST00000399177 GNRH1P01148 92 aa9.48□□□□□ -0.89
CCDC178-203ENST00000399177 VAC14Q08AM6 782 aa9.48□□□□□ -0.89
CCDC178-203ENST00000399177 ARHGEF10LQ9HCE6 1279 aa9.48□□□□□ -0.89
CCDC178-203ENST00000399177 H7C1W4 665 aa9.47□□□□□ -0.89
CCDC178-203ENST00000399177 RHOQP17081 205 aa9.47□□□□□ -0.89
CCDC178-203ENST00000399177 SOX11P35716 441 aa9.47□□□□□ -0.89
CCDC178-203ENST00000399177 CLN3Q13286 438 aa9.47□□□□□ -0.89
CCDC178-203ENST00000399177 NANOS1Q8WY41 292 aaKnown RBP9.47□□□□□ -0.89
CCDC178-203ENST00000399177 CNTNAP3BQ96NU0 1288 aa9.47□□□□□ -0.89
CCDC178-203ENST00000399177 CNTNAP3Q9BZ76 1288 aa9.47□□□□□ -0.89
CCDC178-203ENST00000399177 SCTRP47872 440 aa9.46□□□□□ -0.9
CCDC178-203ENST00000399177 OXLD1Q5BKU9 147 aa9.46□□□□□ -0.9
CCDC178-203ENST00000399177 GMCL1Q96IK5 515 aa9.46□□□□□ -0.9
CCDC178-203ENST00000399177 COL25A1Q9BXS0 654 aaPredicted RBP9.46□□□□□ -0.9
CCDC178-203ENST00000399177 GNASQ5JWF2 1037 aa9.45□□□□□ -0.9
CCDC178-203ENST00000399177 KDF1Q8NAX2 398 aaPredicted RBP9.45□□□□□ -0.9
CCDC178-203ENST00000399177 GAS2L1Q99501 681 aaPredicted RBP9.45□□□□□ -0.9
CCDC178-203ENST00000399177 MCM6Q14566 821 aa9.44□□□□□ -0.9
CCDC178-203ENST00000399177 TMEM214Q6NUQ4 689 aaKnown RBP9.44□□□□□ -0.9
CCDC178-203ENST00000399177 TAS1R3Q7RTX0 852 aa9.44□□□□□ -0.9
CCDC178-203ENST00000399177 CNKSR1Q969H4 720 aa9.44□□□□□ -0.9
CCDC178-203ENST00000399177 TRERF1Q96PN7 1200 aa9.44□□□□□ -0.9
CCDC178-203ENST00000399177 OSBPL3Q9H4L5 887 aa9.44□□□□□ -0.9
CCDC178-203ENST00000399177 RAB6BQ9NRW1 208 aa9.44□□□□□ -0.9
CCDC178-203ENST00000399177 GPR37L1O60883 481 aa9.43□□□□□ -0.9
CCDC178-203ENST00000399177 POU4F2Q12837 409 aa9.43□□□□□ -0.9
CCDC178-203ENST00000399177 FLIIQ13045 1269 aa9.43□□□□□ -0.9
CCDC178-203ENST00000399177 ZSCAN10Q96SZ4 725 aaPredicted RBP9.43□□□□□ -0.9
CCDC178-203ENST00000399177 TIMMDC1Q9NPL8 285 aa9.43□□□□□ -0.9
CCDC178-203ENST00000399177 DYRK1BQ9Y463 629 aa9.43□□□□□ -0.9
CCDC178-203ENST00000399177 TRAK2O60296 914 aa9.42□□□□□ -0.9
CCDC178-203ENST00000399177 IRF5Q13568 498 aa9.42□□□□□ -0.9
CCDC178-203ENST00000399177 MAP7D1Q3KQU3 841 aa9.42□□□□□ -0.9
CCDC178-203ENST00000399177 CCDC85AQ96PX6 553 aaPredicted RBP9.42□□□□□ -0.9
CCDC178-203ENST00000399177 ESYT1Q9BSJ8 1104 aa9.42□□□□□ -0.9
CCDC178-203ENST00000399177 WASLO00401 505 aaPredicted RBP9.41□□□□□ -0.9
CCDC178-203ENST00000399177 UBTFP17480 764 aaKnown RBP9.41□□□□□ -0.9
CCDC178-203ENST00000399177 LORP23490 312 aaPredicted RBP9.41□□□□□ -0.9
CCDC178-203ENST00000399177 WDR44Q5JSH3 913 aa9.41□□□□□ -0.9
CCDC178-203ENST00000399177 NBPF10Q6P3W6 841 aaKnown RBP9.41□□□□□ -0.9
CCDC178-203ENST00000399177 SVOPQ8N4V2 548 aa9.41□□□□□ -0.9
CCDC178-203ENST00000399177 NBPF15Q8N660 670 aa9.41□□□□□ -0.9
CCDC178-203ENST00000399177 SENP3-EIF4A1A0A087X0R7 540 aa9.4□□□□□ -0.9
CCDC178-203ENST00000399177 CSB-PGBD3P0DP91 1061 aa9.4□□□□□ -0.9
CCDC178-203ENST00000399177 MAP3K10Q02779 954 aa9.4□□□□□ -0.9
CCDC178-203ENST00000399177 TRIM22Q8IYM9 498 aa9.4□□□□□ -0.9
CCDC178-203ENST00000399177 PGBD3Q8N328 593 aa9.4□□□□□ -0.9
CCDC178-203ENST00000399177 CDCA7Q9BWT1 371 aaPredicted RBP9.4□□□□□ -0.9
CCDC178-203ENST00000399177 NSFL1CQ9UNZ2 370 aaKnown RBP9.4□□□□□ -0.9
CCDC178-203ENST00000399177 CENPCQ03188 943 aa9.39□□□□□ -0.91
CCDC178-203ENST00000399177 GPR161Q8N6U8 529 aaKnown RBP9.39□□□□□ -0.91
CCDC178-203ENST00000399177 GRIP2Q9C0E4 1043 aa9.39□□□□□ -0.91
CCDC178-203ENST00000399177 SPATA31C2B4DYI2 1134 aa9.37□□□□□ -0.91
CCDC178-203ENST00000399177 RNF225M0QZC1 329 aaPredicted RBP9.37□□□□□ -0.91
CCDC178-203ENST00000399177 F11P03951 625 aa9.37□□□□□ -0.91
CCDC178-203ENST00000399177 PLPP7Q8NBV4 271 aa9.37□□□□□ -0.91
CCDC178-203ENST00000399177 ENAMQ9NRM1 1142 aa9.37□□□□□ -0.91
CCDC178-203ENST00000399177 TLR1Q15399 786 aa9.36□□□□□ -0.91
CCDC178-203ENST00000399177 NUCKS1Q9H1E3 243 aaKnown RBP9.36□□□□□ -0.91
CCDC178-203ENST00000399177 COG6Q9Y2V7 657 aa9.36□□□□□ -0.91
CCDC178-203ENST00000399177 A0A1B0GTH6 734 aa9.35□□□□□ -0.91
CCDC178-203ENST00000399177 IL2RAP01589 272 aa9.35□□□□□ -0.91
CCDC178-203ENST00000399177 PHKA2P46019 1235 aa9.35□□□□□ -0.91
CCDC178-203ENST00000399177 PSME1Q06323 249 aa9.35□□□□□ -0.91
CCDC178-203ENST00000399177 EML3Q32P44 896 aa9.35□□□□□ -0.91
CCDC178-203ENST00000399177 XAGE2Q96GT9 111 aa9.35□□□□□ -0.91
CCDC178-203ENST00000399177 PHF24Q9UPV7 400 aa9.35□□□□□ -0.91
CCDC178-203ENST00000399177 MARSP56192 900 aaKnown RBP9.34□□□□□ -0.91
CCDC178-203ENST00000399177 SRSF11Q05519 484 aaKnown RBP9.34□□□□□ -0.91
CCDC178-203ENST00000399177 EFHC2Q5JST6 749 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms