RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 HOXC9P31274 260 aa22.34■■□□□ 1.17
HLA-DQB1-204ENST00000399084 NPHP4O75161 1426 aaPredicted RBP22.33■■□□□ 1.17
HLA-DQB1-204ENST00000399084 NUCB1Q02818 461 aa22.33■■□□□ 1.17
HLA-DQB1-204ENST00000399084 INTS3Q68E01 1043 aaKnown RBP22.33■■□□□ 1.17
HLA-DQB1-204ENST00000399084 KCNH5Q8NCM2 988 aa22.33■■□□□ 1.17
HLA-DQB1-204ENST00000399084 DCTN1Q14203 1278 aa22.31■■□□□ 1.16
HLA-DQB1-204ENST00000399084 MTHFSDQ2M296 383 aaKnown RBP22.31■■□□□ 1.16
HLA-DQB1-204ENST00000399084 MARF1Q9Y4F3 1742 aaKnown RBP22.31■■□□□ 1.16
HLA-DQB1-204ENST00000399084 ELL2O00472 640 aaPredicted RBP22.3■■□□□ 1.16
HLA-DQB1-204ENST00000399084 EIF5BO60841 1220 aaKnown RBP22.29■■□□□ 1.16
HLA-DQB1-204ENST00000399084 MCM10Q7L590 875 aa22.28■■□□□ 1.16
HLA-DQB1-204ENST00000399084 CHMP4AQ9BY43 222 aa22.28■■□□□ 1.16
HLA-DQB1-204ENST00000399084 SOX12O15370 315 aa22.28■■□□□ 1.16
HLA-DQB1-204ENST00000399084 IP6K1Q92551 441 aa22.28■■□□□ 1.16
HLA-DQB1-204ENST00000399084 USP19O94966 1318 aa22.28■■□□□ 1.16
HLA-DQB1-204ENST00000399084 GNAT3A8MTJ3 354 aa22.27■■□□□ 1.16
HLA-DQB1-204ENST00000399084 BECN1Q14457 450 aa22.27■■□□□ 1.16
HLA-DQB1-204ENST00000399084 NWD1Q149M9 1564 aa22.26■■□□□ 1.15
HLA-DQB1-204ENST00000399084 PSME1Q06323 249 aa22.26■■□□□ 1.15
HLA-DQB1-204ENST00000399084 RTL5Q5HYW3 569 aaPredicted RBP22.26■■□□□ 1.15
HLA-DQB1-204ENST00000399084 CHD1LQ86WJ1 897 aa22.26■■□□□ 1.15
HLA-DQB1-204ENST00000399084 PHRF1Q9P1Y6 1649 aaKnown RBP22.26■■□□□ 1.15
HLA-DQB1-204ENST00000399084 RPAP2Q8IXW5 612 aaPredicted RBP22.24■■□□□ 1.15
HLA-DQB1-204ENST00000399084 TSPYL4Q9UJ04 414 aa22.24■■□□□ 1.15
HLA-DQB1-204ENST00000399084 TBC1D32Q96NH3 1257 aa22.23■■□□□ 1.15
HLA-DQB1-204ENST00000399084 LRRC37A3O60309 1634 aa22.22■■□□□ 1.15
HLA-DQB1-204ENST00000399084 ESCO1Q5FWF5 840 aa22.22■■□□□ 1.15
HLA-DQB1-204ENST00000399084 NFAT5O94916 1531 aa22.22■■□□□ 1.15
HLA-DQB1-204ENST00000399084 MAP3K5Q99683 1374 aa22.21■■□□□ 1.15
HLA-DQB1-204ENST00000399084 BMP2KLQ5H9B9 411 aa22.2■■□□□ 1.14
HLA-DQB1-204ENST00000399084 MST1RQ04912 1400 aa22.19■■□□□ 1.14
HLA-DQB1-204ENST00000399084 SEC24BO95487 1268 aa22.19■■□□□ 1.14
HLA-DQB1-204ENST00000399084 CCT4P50991 539 aaKnown RBP22.19■■□□□ 1.14
HLA-DQB1-204ENST00000399084 TAF7Q15545 349 aaPredicted RBP22.19■■□□□ 1.14
HLA-DQB1-204ENST00000399084 RGS12O14924 1447 aa22.19■■□□□ 1.14
HLA-DQB1-204ENST00000399084 CCDC30Q5VVM6 783 aa22.18■■□□□ 1.14
HLA-DQB1-204ENST00000399084 STK31Q9BXU1 1019 aa22.18■■□□□ 1.14
HLA-DQB1-204ENST00000399084 DCTPP1Q9H773 170 aa22.18■■□□□ 1.14
HLA-DQB1-204ENST00000399084 NCOA3Q9Y6Q9 1424 aa22.18■■□□□ 1.14
HLA-DQB1-204ENST00000399084 CACNA1FO60840 1977 aa22.18■■□□□ 1.14
HLA-DQB1-204ENST00000399084 FOXO3O43524 673 aa22.17■■□□□ 1.14
HLA-DQB1-204ENST00000399084 SLC4A2P04920 1241 aa22.17■■□□□ 1.14
HLA-DQB1-204ENST00000399084 C14orf37Q86TY3 774 aa22.17■■□□□ 1.14
HLA-DQB1-204ENST00000399084 ANKRD44Q8N8A2 993 aa22.17■■□□□ 1.14
HLA-DQB1-204ENST00000399084 LTN1O94822 1766 aa22.17■■□□□ 1.14
HLA-DQB1-204ENST00000399084 KIF1AQ12756 1690 aa22.16■■□□□ 1.14
HLA-DQB1-204ENST00000399084 ANKRD45Q5TZF3 282 aa22.16■■□□□ 1.14
HLA-DQB1-204ENST00000399084 NUTM2GQ5VZR2 741 aa22.16■■□□□ 1.14
HLA-DQB1-204ENST00000399084 SIRT2Q8IXJ6 389 aa22.16■■□□□ 1.14
HLA-DQB1-204ENST00000399084 C19orf44Q9H6X5 657 aa22.16■■□□□ 1.14
HLA-DQB1-204ENST00000399084 SLIT3O75094 1523 aa22.15■■□□□ 1.14
HLA-DQB1-204ENST00000399084 NBR1Q14596 966 aa22.14■■□□□ 1.14
HLA-DQB1-204ENST00000399084 HOXB7P09629 217 aa22.14■■□□□ 1.13
HLA-DQB1-204ENST00000399084 AMOTQ4VCS5 1084 aa22.14■■□□□ 1.13
HLA-DQB1-204ENST00000399084 LNPKQ9C0E8 428 aa22.14■■□□□ 1.13
HLA-DQB1-204ENST00000399084 CEMIPQ8WUJ3 1361 aa22.13■■□□□ 1.13
HLA-DQB1-204ENST00000399084 HMMRO75330 724 aa22.13■■□□□ 1.13
HLA-DQB1-204ENST00000399084 FBXO41Q8TF61 875 aa22.13■■□□□ 1.13
HLA-DQB1-204ENST00000399084 MSH6P52701 1360 aa22.12■■□□□ 1.13
HLA-DQB1-204ENST00000399084 KRT24Q2M2I5 525 aa22.12■■□□□ 1.13
HLA-DQB1-204ENST00000399084 PROSER2Q86WR7 435 aaPredicted RBP22.12■■□□□ 1.13
HLA-DQB1-204ENST00000399084 IL17REQ8NFR9 667 aa22.12■■□□□ 1.13
HLA-DQB1-204ENST00000399084 NCAPD2Q15021 1401 aa22.12■■□□□ 1.13
HLA-DQB1-204ENST00000399084 ARHGEF25Q86VW2 580 aa22.11■■□□□ 1.13
HLA-DQB1-204ENST00000399084 DCCP43146 1447 aa22.11■■□□□ 1.13
HLA-DQB1-204ENST00000399084 GCP02774 474 aa22.11■■□□□ 1.13
HLA-DQB1-204ENST00000399084 PLEKHO1Q53GL0 409 aaPredicted RBP22.11■■□□□ 1.13
HLA-DQB1-204ENST00000399084 C22orf23Q9BZE7 217 aa22.11■■□□□ 1.13
HLA-DQB1-204ENST00000399084 OVOS2A0A0G2JMS6 1433 aa22.1■■□□□ 1.13
HLA-DQB1-204ENST00000399084 ATP10DQ9P241 1426 aa22.09■■□□□ 1.13
HLA-DQB1-204ENST00000399084 LMTK3Q96Q04 1460 aa22.09■■□□□ 1.13
HLA-DQB1-204ENST00000399084 CEP85Q6P2H3 762 aa22.09■■□□□ 1.13
HLA-DQB1-204ENST00000399084 LTV1Q96GA3 475 aaPredicted RBP22.09■■□□□ 1.13
HLA-DQB1-204ENST00000399084 C1orf115Q9H7X2 142 aa22.09■■□□□ 1.13
HLA-DQB1-204ENST00000399084 MIS18AQ9NYP9 233 aa22.09■■□□□ 1.13
HLA-DQB1-204ENST00000399084 GNAI3P08754 354 aa22.08■■□□□ 1.12
HLA-DQB1-204ENST00000399084 RBM25P49756 843 aaKnown RBP22.08■■□□□ 1.12
HLA-DQB1-204ENST00000399084 AKAP4Q5JQC9 854 aa22.08■■□□□ 1.12
HLA-DQB1-204ENST00000399084 NBPF6Q5VWK0 638 aa22.08■■□□□ 1.12
HLA-DQB1-204ENST00000399084 NBPF4Q96M43 638 aa22.08■■□□□ 1.12
HLA-DQB1-204ENST00000399084 PLEKHG2Q9H7P9 1386 aa22.08■■□□□ 1.12
HLA-DQB1-204ENST00000399084 PXDNLA1KZ92 1463 aa22.07■■□□□ 1.12
HLA-DQB1-204ENST00000399084 C1orf167Q5SNV9 1468 aa22.07■■□□□ 1.12
HLA-DQB1-204ENST00000399084 KRT28Q7Z3Y7 464 aa22.06■■□□□ 1.12
HLA-DQB1-204ENST00000399084 MED1Q15648 1581 aaPredicted RBP22.06■■□□□ 1.12
HLA-DQB1-204ENST00000399084 ORAI2Q96SN7 254 aa22.06■■□□□ 1.12
HLA-DQB1-204ENST00000399084 TRPM3Q9HCF6 1732 aaPredicted RBP22.05■■□□□ 1.12
HLA-DQB1-204ENST00000399084 FLIIQ13045 1269 aa22.05■■□□□ 1.12
HLA-DQB1-204ENST00000399084 SLC4A3P48751 1232 aa22.04■■□□□ 1.12
HLA-DQB1-204ENST00000399084 LMO7Q8WWI1 1683 aa22.04■■□□□ 1.12
HLA-DQB1-204ENST00000399084 GNAI2P04899 355 aa22.03■■□□□ 1.12
HLA-DQB1-204ENST00000399084 MFAP1P55081 439 aaKnown RBP22.03■■□□□ 1.12
HLA-DQB1-204ENST00000399084 RBM33Q96EV2 1170 aaKnown RBP22.03■■□□□ 1.12
HLA-DQB1-204ENST00000399084 FAM208AQ9UK61 1670 aaKnown RBP22.02■■□□□ 1.12
HLA-DQB1-204ENST00000399084 ATF3P18847 181 aa22.02■■□□□ 1.12
HLA-DQB1-204ENST00000399084 MEIS3Q99687 375 aa22.02■■□□□ 1.12
HLA-DQB1-204ENST00000399084 CAMTA1Q9Y6Y1 1673 aa22.02■■□□□ 1.11
HLA-DQB1-204ENST00000399084 G2E3Q7L622 706 aa22.01■■□□□ 1.11
HLA-DQB1-204ENST00000399084 PLEKHM2Q8IWE5 1019 aa22.01■■□□□ 1.11
HLA-DQB1-204ENST00000399084 N4BP2Q86UW6 1770 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms