RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 SART3Q15020 963 aaKnown RBP17.06■□□□□ 0.32
PCDHA11-201ENST00000398640 CNTROBQ8N137 903 aa17.05■□□□□ 0.32
PCDHA11-201ENST00000398640 NBPF14Q5TI25 921 aa17.05■□□□□ 0.32
PCDHA11-201ENST00000398640 SETQ01105 290 aaPredicted RBP17.05■□□□□ 0.32
PCDHA11-201ENST00000398640 CCDC158Q5M9N0 1113 aa17.05■□□□□ 0.32
PCDHA11-201ENST00000398640 SHANK2Q9UPX8 1470 aa17.05■□□□□ 0.32
PCDHA11-201ENST00000398640 PDILTQ8N807 584 aa17.04■□□□□ 0.32
PCDHA11-201ENST00000398640 SLC4A2P04920 1241 aa17.04■□□□□ 0.32
PCDHA11-201ENST00000398640 C22orf23Q9BZE7 217 aa17.04■□□□□ 0.32
PCDHA11-201ENST00000398640 IFNL2Q8IZJ0 200 aa17.04■□□□□ 0.32
PCDHA11-201ENST00000398640 CDCA7LQ96GN5 454 aa17.04■□□□□ 0.32
PCDHA11-201ENST00000398640 CHMP5Q9NZZ3 219 aa17.04■□□□□ 0.32
PCDHA11-201ENST00000398640 CLASRPQ8N2M8 674 aaKnown RBP17.03■□□□□ 0.32
PCDHA11-201ENST00000398640 CCDC85AQ96PX6 553 aaPredicted RBP17.03■□□□□ 0.32
PCDHA11-201ENST00000398640 DDB1Q16531 1140 aa17.03■□□□□ 0.32
PCDHA11-201ENST00000398640 TTC21BQ7Z4L5 1316 aa17.03■□□□□ 0.32
PCDHA11-201ENST00000398640 PPIP5K1Q6PFW1 1433 aa17.03■□□□□ 0.32
PCDHA11-201ENST00000398640 TTLL5Q6EMB2 1281 aa17.03■□□□□ 0.32
PCDHA11-201ENST00000398640 MAP4K4O95819 1239 aaPredicted RBP17.02■□□□□ 0.32
PCDHA11-201ENST00000398640 CDK5RAP3Q96JB5 506 aa17.02■□□□□ 0.32
PCDHA11-201ENST00000398640 EXOSC9Q06265 439 aaKnown RBP17.02■□□□□ 0.32
PCDHA11-201ENST00000398640 CCDC57Q2TAC2 916 aa17.02■□□□□ 0.32
PCDHA11-201ENST00000398640 EMILIN1Q9Y6C2 1016 aa17.02■□□□□ 0.32
PCDHA11-201ENST00000398640 CDC45O75419 566 aa17.02■□□□□ 0.31
PCDHA11-201ENST00000398640 NFE2L2Q16236 605 aa17.02■□□□□ 0.31
PCDHA11-201ENST00000398640 ZNF219Q9P2Y4 722 aaPredicted RBP17.02■□□□□ 0.31
PCDHA11-201ENST00000398640 CABLES1Q8TDN4 633 aa17.02■□□□□ 0.31
PCDHA11-201ENST00000398640 OLFM4Q6UX06 510 aa17.01■□□□□ 0.31
PCDHA11-201ENST00000398640 OFD1O75665 1012 aa17.01■□□□□ 0.31
PCDHA11-201ENST00000398640 HSP90AA2PQ14568 343 aaPredicted RBP17.01■□□□□ 0.31
PCDHA11-201ENST00000398640 IGHMBP2P38935 993 aaKnown RBP17.01■□□□□ 0.31
PCDHA11-201ENST00000398640 IFT57Q9NWB7 429 aa17.01■□□□□ 0.31
PCDHA11-201ENST00000398640 KRT18P05783 430 aaKnown RBP17■□□□□ 0.31
PCDHA11-201ENST00000398640 PSMA5P28066 241 aa17■□□□□ 0.31
PCDHA11-201ENST00000398640 ACSBG1Q96GR2 724 aa17■□□□□ 0.31
PCDHA11-201ENST00000398640 CFAP43Q8NDM7 1665 aa17■□□□□ 0.31
PCDHA11-201ENST00000398640 RFC4P35249 363 aa17■□□□□ 0.31
PCDHA11-201ENST00000398640 HSP90AB2PQ58FF8 381 aa17■□□□□ 0.31
PCDHA11-201ENST00000398640 ZCRB1Q8TBF4 217 aaKnown RBP16.99■□□□□ 0.31
PCDHA11-201ENST00000398640 NUCB2P80303 420 aa16.99■□□□□ 0.31
PCDHA11-201ENST00000398640 RPGRQ92834 1020 aaKnown RBP16.99■□□□□ 0.31
PCDHA11-201ENST00000398640 SDF4Q9BRK5 362 aa16.99■□□□□ 0.31
PCDHA11-201ENST00000398640 TEX13AQ9BXU3 409 aaPredicted RBP16.99■□□□□ 0.31
PCDHA11-201ENST00000398640 ZNF771Q7L3S4 317 aaPredicted RBP16.99■□□□□ 0.31
PCDHA11-201ENST00000398640 SRCIN1Q9C0H9 1055 aa16.99■□□□□ 0.31
PCDHA11-201ENST00000398640 CHMP4BP1P59074 171 aa16.99■□□□□ 0.31
PCDHA11-201ENST00000398640 A0A087WZG4 1122 aa16.98■□□□□ 0.31
PCDHA11-201ENST00000398640 MPHOSPH10O00566 681 aaKnown RBP16.98■□□□□ 0.31
PCDHA11-201ENST00000398640 TSR2Q969E8 191 aaKnown RBP16.98■□□□□ 0.31
PCDHA11-201ENST00000398640 ERC1Q8IUD2 1116 aa16.98■□□□□ 0.31
PCDHA11-201ENST00000398640 CEBPZQ03701 1054 aaKnown RBP16.98■□□□□ 0.31
PCDHA11-201ENST00000398640 TCOF1Q13428 1488 aaKnown RBP16.98■□□□□ 0.31
PCDHA11-201ENST00000398640 MYO5CQ9NQX4 1742 aa16.98■□□□□ 0.31
PCDHA11-201ENST00000398640 TRPM2O94759 1503 aa16.97■□□□□ 0.31
PCDHA11-201ENST00000398640 AAMPQ13685 434 aa16.97■□□□□ 0.31
PCDHA11-201ENST00000398640 FMNL2Q96PY5 1086 aa16.97■□□□□ 0.31
PCDHA11-201ENST00000398640 TAF7Q15545 349 aaPredicted RBP16.97■□□□□ 0.31
PCDHA11-201ENST00000398640 HSP90AB3PQ58FF7 597 aa16.97■□□□□ 0.31
PCDHA11-201ENST00000398640 RUFY1Q96T51 708 aa16.97■□□□□ 0.31
PCDHA11-201ENST00000398640 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.97■□□□□ 0.31
PCDHA11-201ENST00000398640 CCT4P50991 539 aaKnown RBP16.97■□□□□ 0.31
PCDHA11-201ENST00000398640 NOB1Q9ULX3 412 aaKnown RBP16.97■□□□□ 0.31
PCDHA11-201ENST00000398640 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.97■□□□□ 0.31
PCDHA11-201ENST00000398640 POLD1P28340 1107 aa16.97■□□□□ 0.31
PCDHA11-201ENST00000398640 SMARCC1Q92922 1105 aaPredicted RBP16.97■□□□□ 0.31
PCDHA11-201ENST00000398640 MYCNP04198 464 aaPredicted RBP16.96■□□□□ 0.31
PCDHA11-201ENST00000398640 FKBP4Q02790 459 aaKnown RBP eCLIP16.96■□□□□ 0.31
PCDHA11-201ENST00000398640 YEATS2Q9ULM3 1422 aa16.96■□□□□ 0.31
PCDHA11-201ENST00000398640 KDM6BO15054 1643 aa16.96■□□□□ 0.31
PCDHA11-201ENST00000398640 TTLL12Q14166 644 aaPredicted RBP16.96■□□□□ 0.31
PCDHA11-201ENST00000398640 NSD2O96028 1365 aa16.96■□□□□ 0.31
PCDHA11-201ENST00000398640 MCM10Q7L590 875 aa16.96■□□□□ 0.31
PCDHA11-201ENST00000398640 GNAI2P04899 355 aa16.95■□□□□ 0.3
PCDHA11-201ENST00000398640 RNF214Q8ND24 703 aa16.95■□□□□ 0.3
PCDHA11-201ENST00000398640 ZHX3Q9H4I2 956 aa16.95■□□□□ 0.3
PCDHA11-201ENST00000398640 MAPKBP1O60336 1514 aa16.95■□□□□ 0.3
PCDHA11-201ENST00000398640 BRPF1P55201 1214 aaPredicted RBP16.95■□□□□ 0.3
PCDHA11-201ENST00000398640 SKIDA1Q1XH10 827 aa16.95■□□□□ 0.3
PCDHA11-201ENST00000398640 RAI14Q9P0K7 980 aa16.95■□□□□ 0.3
PCDHA11-201ENST00000398640 SLAIN2Q9P270 581 aa16.95■□□□□ 0.3
PCDHA11-201ENST00000398640 ZCCHC11Q5TAX3 1644 aaKnown RBP16.95■□□□□ 0.3
PCDHA11-201ENST00000398640 MNS1Q8NEH6 495 aa16.95■□□□□ 0.3
PCDHA11-201ENST00000398640 NUP133Q8WUM0 1156 aa16.94■□□□□ 0.3
PCDHA11-201ENST00000398640 STK3Q13188 491 aa16.94■□□□□ 0.3
PCDHA11-201ENST00000398640 BTG4Q9NY30 223 aa16.94■□□□□ 0.3
PCDHA11-201ENST00000398640 SAMD9Q5K651 1589 aa16.94■□□□□ 0.3
PCDHA11-201ENST00000398640 IL2RBP14784 551 aa16.94■□□□□ 0.3
PCDHA11-201ENST00000398640 CAGE1Q8TC20 777 aa16.94■□□□□ 0.3
PCDHA11-201ENST00000398640 FAM13BQ9NYF5 915 aa16.94■□□□□ 0.3
PCDHA11-201ENST00000398640 WDR63Q8IWG1 891 aa16.94■□□□□ 0.3
PCDHA11-201ENST00000398640 NAT10Q9H0A0 1025 aaKnown RBP16.94■□□□□ 0.3
PCDHA11-201ENST00000398640 MIS18AQ9NYP9 233 aa16.94■□□□□ 0.3
PCDHA11-201ENST00000398640 RPRD2Q5VT52 1461 aaKnown RBP16.94■□□□□ 0.3
PCDHA11-201ENST00000398640 MAST1Q9Y2H9 1570 aa16.94■□□□□ 0.3
PCDHA11-201ENST00000398640 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.93■□□□□ 0.3
PCDHA11-201ENST00000398640 PIBF1Q8WXW3 757 aa16.93■□□□□ 0.3
PCDHA11-201ENST00000398640 ST5P78524 1137 aa16.93■□□□□ 0.3
PCDHA11-201ENST00000398640 TMOD2Q9NZR1 351 aa16.93■□□□□ 0.3
PCDHA11-201ENST00000398640 NEK4P51957 841 aa16.92■□□□□ 0.3
PCDHA11-201ENST00000398640 BCAR3O75815 825 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms