RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 EXOC6BQ9Y2D4 811 aa13.82□□□□□ -0.2
PCDHGA8-201ENST00000398604 BTBD11A6QL63 1104 aa13.82□□□□□ -0.2
PCDHGA8-201ENST00000398604 CCDC158Q5M9N0 1113 aa13.82□□□□□ -0.2
PCDHGA8-201ENST00000398604 ADGRF5Q8IZF2 1346 aa13.82□□□□□ -0.2
PCDHGA8-201ENST00000398604 PREX2Q70Z35 1606 aa13.82□□□□□ -0.2
PCDHGA8-201ENST00000398604 SART3Q15020 963 aaKnown RBP13.82□□□□□ -0.2
PCDHGA8-201ENST00000398604 SPG7Q9UQ90 795 aa13.81□□□□□ -0.2
PCDHGA8-201ENST00000398604 PSMA5P28066 241 aa13.81□□□□□ -0.2
PCDHGA8-201ENST00000398604 TTC39AQ5SRH9 613 aa13.81□□□□□ -0.2
PCDHGA8-201ENST00000398604 TTLL5Q6EMB2 1281 aa13.81□□□□□ -0.2
PCDHGA8-201ENST00000398604 CDC42BPAQ5VT25 1732 aa13.81□□□□□ -0.2
PCDHGA8-201ENST00000398604 TNNT3P45378 269 aaPredicted RBP13.81□□□□□ -0.2
PCDHGA8-201ENST00000398604 RBM5P52756 815 aaKnown RBP eCLIP13.81□□□□□ -0.2
PCDHGA8-201ENST00000398604 HOOK1Q9UJC3 728 aaKnown RBP13.81□□□□□ -0.2
PCDHGA8-201ENST00000398604 ABCC1P33527 1531 aa13.81□□□□□ -0.2
PCDHGA8-201ENST00000398604 OFD1O75665 1012 aa13.81□□□□□ -0.2
PCDHGA8-201ENST00000398604 SCAF11Q99590 1463 aaKnown RBP13.8□□□□□ -0.2
PCDHGA8-201ENST00000398604 CAVIN1Q6NZI2 390 aaKnown RBP13.8□□□□□ -0.2
PCDHGA8-201ENST00000398604 CEP126Q9P2H0 1117 aa13.8□□□□□ -0.2
PCDHGA8-201ENST00000398604 PRPF40AO75400 957 aaKnown RBP13.8□□□□□ -0.2
PCDHGA8-201ENST00000398604 PIBF1Q8WXW3 757 aa13.8□□□□□ -0.2
PCDHGA8-201ENST00000398604 ABCF2Q9UG63 623 aa13.8□□□□□ -0.2
PCDHGA8-201ENST00000398604 NME9Q86XW9 330 aa13.8□□□□□ -0.2
PCDHGA8-201ENST00000398604 PDILTQ8N807 584 aa13.8□□□□□ -0.2
PCDHGA8-201ENST00000398604 SHROOM2Q13796 1616 aa13.8□□□□□ -0.2
PCDHGA8-201ENST00000398604 RALGAPBQ86X10 1494 aa13.8□□□□□ -0.2
PCDHGA8-201ENST00000398604 PDE3AQ14432 1141 aa13.79□□□□□ -0.2
PCDHGA8-201ENST00000398604 AACSQ86V21 672 aa13.79□□□□□ -0.2
PCDHGA8-201ENST00000398604 CCAR1Q8IX12 1150 aaKnown RBP13.79□□□□□ -0.2
PCDHGA8-201ENST00000398604 AMOTL2Q9Y2J4 779 aa13.79□□□□□ -0.2
PCDHGA8-201ENST00000398604 LRRCC1Q9C099 1032 aa13.79□□□□□ -0.2
PCDHGA8-201ENST00000398604 ADCY10Q96PN6 1610 aa13.79□□□□□ -0.2
PCDHGA8-201ENST00000398604 KAT6BQ8WYB5 2073 aa13.79□□□□□ -0.2
PCDHGA8-201ENST00000398604 XBP1P17861 261 aa13.79□□□□□ -0.2
PCDHGA8-201ENST00000398604 ZFYVE27Q5T4F4 411 aa13.79□□□□□ -0.2
PCDHGA8-201ENST00000398604 IFT57Q9NWB7 429 aa13.79□□□□□ -0.2
PCDHGA8-201ENST00000398604 R3HCC1Q9Y3T6 440 aaKnown RBP13.79□□□□□ -0.2
PCDHGA8-201ENST00000398604 RIMS2Q9UQ26 1411 aa13.79□□□□□ -0.2
PCDHGA8-201ENST00000398604 BRPF1P55201 1214 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA8-201ENST00000398604 NUP133Q8WUM0 1156 aa13.79□□□□□ -0.2
PCDHGA8-201ENST00000398604 TTC37Q6PGP7 1564 aa13.79□□□□□ -0.2
PCDHGA8-201ENST00000398604 FBLN1P23142 703 aa13.78□□□□□ -0.2
PCDHGA8-201ENST00000398604 ZSCAN29Q8IWY8 852 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA8-201ENST00000398604 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA8-201ENST00000398604 TMPOP42166 694 aaKnown RBP13.78□□□□□ -0.2
PCDHGA8-201ENST00000398604 BRMS1Q9HCU9 246 aa13.78□□□□□ -0.2
PCDHGA8-201ENST00000398604 MAST1Q9Y2H9 1570 aa13.78□□□□□ -0.2
PCDHGA8-201ENST00000398604 CWC27Q6UX04 472 aaKnown RBP13.78□□□□□ -0.2
PCDHGA8-201ENST00000398604 MPRIPQ6WCQ1 1025 aa13.78□□□□□ -0.2
PCDHGA8-201ENST00000398604 FAM13BQ9NYF5 915 aa13.78□□□□□ -0.2
PCDHGA8-201ENST00000398604 EMILIN1Q9Y6C2 1016 aa13.78□□□□□ -0.2
PCDHGA8-201ENST00000398604 SAMD9LQ8IVG5 1584 aa13.77□□□□□ -0.2
PCDHGA8-201ENST00000398604 NINLQ9Y2I6 1382 aa13.77□□□□□ -0.2
PCDHGA8-201ENST00000398604 IDH1O75874 414 aaKnown RBP13.77□□□□□ -0.2
PCDHGA8-201ENST00000398604 CT47A1Q5JQC4 288 aaPredicted RBP13.77□□□□□ -0.2
PCDHGA8-201ENST00000398604 CCT4P50991 539 aaKnown RBP13.77□□□□□ -0.21
PCDHGA8-201ENST00000398604 GNL3LQ9NVN8 582 aaKnown RBP13.76□□□□□ -0.21
PCDHGA8-201ENST00000398604 UHRF1BP1Q6BDS2 1440 aa13.76□□□□□ -0.21
PCDHGA8-201ENST00000398604 NUTM1Q86Y26 1132 aa13.76□□□□□ -0.21
PCDHGA8-201ENST00000398604 F6X3S4 739 aa13.76□□□□□ -0.21
PCDHGA8-201ENST00000398604 GCC1Q96CN9 775 aa13.76□□□□□ -0.21
PCDHGA8-201ENST00000398604 PATL2C9JE40 543 aaKnown RBP13.75□□□□□ -0.21
PCDHGA8-201ENST00000398604 FCHSD2O94868 740 aa13.75□□□□□ -0.21
PCDHGA8-201ENST00000398604 STK38Q15208 465 aa13.75□□□□□ -0.21
PCDHGA8-201ENST00000398604 TMEM57Q8N5G2 664 aa13.75□□□□□ -0.21
PCDHGA8-201ENST00000398604 ZHX3Q9H4I2 956 aa13.75□□□□□ -0.21
PCDHGA8-201ENST00000398604 KINO60870 393 aaKnown RBP13.75□□□□□ -0.21
PCDHGA8-201ENST00000398604 MVPQ14764 893 aaKnown RBP13.75□□□□□ -0.21
PCDHGA8-201ENST00000398604 DUSP27Q5VZP5 1158 aa13.75□□□□□ -0.21
PCDHGA8-201ENST00000398604 ERC1Q8IUD2 1116 aa13.75□□□□□ -0.21
PCDHGA8-201ENST00000398604 TRIM5Q9C035 493 aa13.75□□□□□ -0.21
PCDHGA8-201ENST00000398604 ARHGEF12Q9NZN5 1544 aa13.75□□□□□ -0.21
PCDHGA8-201ENST00000398604 TRAK2O60296 914 aa13.75□□□□□ -0.21
PCDHGA8-201ENST00000398604 RAI14Q9P0K7 980 aa13.75□□□□□ -0.21
PCDHGA8-201ENST00000398604 AAMPQ13685 434 aa13.74□□□□□ -0.21
PCDHGA8-201ENST00000398604 HSP90AA2PQ14568 343 aaPredicted RBP13.74□□□□□ -0.21
PCDHGA8-201ENST00000398604 LRP2BPQ9P2M1 347 aa13.74□□□□□ -0.21
PCDHGA8-201ENST00000398604 PRAG1Q86YV5 1406 aa13.74□□□□□ -0.21
PCDHGA8-201ENST00000398604 WDR63Q8IWG1 891 aa13.74□□□□□ -0.21
PCDHGA8-201ENST00000398604 NFE2L2Q16236 605 aa13.74□□□□□ -0.21
PCDHGA8-201ENST00000398604 CYP46A1Q9Y6A2 500 aa13.74□□□□□ -0.21
PCDHGA8-201ENST00000398604 WASLO00401 505 aaPredicted RBP13.73□□□□□ -0.21
PCDHGA8-201ENST00000398604 SLFN5Q08AF3 891 aa13.73□□□□□ -0.21
PCDHGA8-201ENST00000398604 TMEM132AQ24JP5 1023 aa13.73□□□□□ -0.21
PCDHGA8-201ENST00000398604 PUS7Q96PZ0 661 aaKnown RBP13.73□□□□□ -0.21
PCDHGA8-201ENST00000398604 DISP3Q9P2K9 1392 aa13.73□□□□□ -0.21
PCDHGA8-201ENST00000398604 CROCC2H7BZ55 1655 aa13.73□□□□□ -0.21
PCDHGA8-201ENST00000398604 EPS15P42566 896 aa13.73□□□□□ -0.21
PCDHGA8-201ENST00000398604 OLFM4Q6UX06 510 aa13.73□□□□□ -0.21
PCDHGA8-201ENST00000398604 ZNF219Q9P2Y4 722 aaPredicted RBP13.73□□□□□ -0.21
PCDHGA8-201ENST00000398604 GNAT3A8MTJ3 354 aa13.73□□□□□ -0.21
PCDHGA8-201ENST00000398604 UPF3BQ9BZI7 483 aaKnown RBP13.73□□□□□ -0.21
PCDHGA8-201ENST00000398604 SMARCA5O60264 1052 aaPredicted RBP13.73□□□□□ -0.21
PCDHGA8-201ENST00000398604 PDCP20941 246 aa13.73□□□□□ -0.21
PCDHGA8-201ENST00000398604 CCDC70Q6NSX1 233 aa13.73□□□□□ -0.21
PCDHGA8-201ENST00000398604 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.73□□□□□ -0.21
PCDHGA8-201ENST00000398604 TBX22Q9Y458 520 aa13.73□□□□□ -0.21
PCDHGA8-201ENST00000398604 EIF2AK4Q9P2K8 1649 aaKnown RBP13.72□□□□□ -0.21
PCDHGA8-201ENST00000398604 SLC3A2P08195 630 aaKnown RBP13.72□□□□□ -0.21
PCDHGA8-201ENST00000398604 CHD1LQ86WJ1 897 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms