RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 MAPK8IP2Q13387 824 aaPredicted RBP13.85□□□□□ -0.19
TMF1-201ENST00000398559 CFAP100Q494V2 611 aa13.85□□□□□ -0.19
TMF1-201ENST00000398559 SOGA3Q5TF21 947 aa13.85□□□□□ -0.19
TMF1-201ENST00000398559 ZSCAN25Q6NSZ9 544 aa13.85□□□□□ -0.19
TMF1-201ENST00000398559 CDK19Q9BWU1 502 aa13.85□□□□□ -0.19
TMF1-201ENST00000398559 TMEM57Q8N5G2 664 aa13.85□□□□□ -0.19
TMF1-201ENST00000398559 USP8P40818 1118 aa13.85□□□□□ -0.19
TMF1-201ENST00000398559 ESCO1Q5FWF5 840 aa13.85□□□□□ -0.19
TMF1-201ENST00000398559 TMCO3Q6UWJ1 677 aa13.84□□□□□ -0.19
TMF1-201ENST00000398559 CCDC57Q2TAC2 916 aa13.84□□□□□ -0.19
TMF1-201ENST00000398559 ARHGAP29Q52LW3 1261 aa13.84□□□□□ -0.19
TMF1-201ENST00000398559 CCDC148Q8NFR7 591 aa13.84□□□□□ -0.19
TMF1-201ENST00000398559 KRT32Q14532 448 aa13.84□□□□□ -0.19
TMF1-201ENST00000398559 NUTM1Q86Y26 1132 aa13.84□□□□□ -0.19
TMF1-201ENST00000398559 PTPN14Q15678 1187 aa13.84□□□□□ -0.19
TMF1-201ENST00000398559 TATP17735 454 aaPredicted RBP13.84□□□□□ -0.19
TMF1-201ENST00000398559 EIF5P55010 431 aaKnown RBP13.84□□□□□ -0.19
TMF1-201ENST00000398559 PAF1Q8N7H5 531 aa13.84□□□□□ -0.19
TMF1-201ENST00000398559 CABP1Q9NZU7 370 aa13.84□□□□□ -0.19
TMF1-201ENST00000398559 CABP4P57796 275 aa13.83□□□□□ -0.19
TMF1-201ENST00000398559 CCDC83Q8IWF9 413 aa13.83□□□□□ -0.19
TMF1-201ENST00000398559 SSBP05455 408 aaKnown RBP eCLIP13.83□□□□□ -0.2
TMF1-201ENST00000398559 CFTRP13569 1480 aa13.83□□□□□ -0.2
TMF1-201ENST00000398559 KIAA1107Q9UPP5 1409 aa13.83□□□□□ -0.2
TMF1-201ENST00000398559 SLFN5Q08AF3 891 aa13.83□□□□□ -0.2
TMF1-201ENST00000398559 CTNNA3Q9UI47 895 aa13.83□□□□□ -0.2
TMF1-201ENST00000398559 TDO2P48775 406 aa13.82□□□□□ -0.2
TMF1-201ENST00000398559 CCDC183Q5T5S1 534 aa13.82□□□□□ -0.2
TMF1-201ENST00000398559 TAF3Q5VWG9 929 aa13.82□□□□□ -0.2
TMF1-201ENST00000398559 WDR97A6NE52 1622 aa13.82□□□□□ -0.2
TMF1-201ENST00000398559 CASQ1P31415 396 aa13.82□□□□□ -0.2
TMF1-201ENST00000398559 FERMT3Q86UX7 667 aa13.82□□□□□ -0.2
TMF1-201ENST00000398559 TXNDC2Q86VQ3 553 aa13.82□□□□□ -0.2
TMF1-201ENST00000398559 PIBF1Q8WXW3 757 aa13.82□□□□□ -0.2
TMF1-201ENST00000398559 TAF4BQ92750 862 aa13.82□□□□□ -0.2
TMF1-201ENST00000398559 UBAC1Q9BSL1 405 aa13.82□□□□□ -0.2
TMF1-201ENST00000398559 GBP2P32456 591 aaPredicted RBP13.81□□□□□ -0.2
TMF1-201ENST00000398559 ZNF530Q6P9A1 599 aaPredicted RBP13.81□□□□□ -0.2
TMF1-201ENST00000398559 RPAP2Q8IXW5 612 aaPredicted RBP13.81□□□□□ -0.2
TMF1-201ENST00000398559 XPCQ01831 940 aaPredicted RBP13.81□□□□□ -0.2
TMF1-201ENST00000398559 HFM1A2PYH4 1435 aa13.81□□□□□ -0.2
TMF1-201ENST00000398559 SKAP1Q86WV1 359 aa13.81□□□□□ -0.2
TMF1-201ENST00000398559 CRACR2AQ9BSW2 395 aa13.81□□□□□ -0.2
TMF1-201ENST00000398559 BMP2KQ9NSY1 1161 aaPredicted RBP13.81□□□□□ -0.2
TMF1-201ENST00000398559 SMARCA5O60264 1052 aaPredicted RBP13.81□□□□□ -0.2
TMF1-201ENST00000398559 WASF1Q92558 559 aa13.81□□□□□ -0.2
TMF1-201ENST00000398559 SPINK5Q9NQ38 1064 aaPredicted RBP13.81□□□□□ -0.2
TMF1-201ENST00000398559 SFPQP23246 707 aaKnown RBP eCLIP13.8□□□□□ -0.2
TMF1-201ENST00000398559 STRN4Q9NRL3 753 aa13.8□□□□□ -0.2
TMF1-201ENST00000398559 EXOC6BQ9Y2D4 811 aa13.8□□□□□ -0.2
TMF1-201ENST00000398559 MPHOSPH8Q99549 860 aa13.8□□□□□ -0.2
TMF1-201ENST00000398559 KIF2AO00139 706 aaPredicted RBP13.8□□□□□ -0.2
TMF1-201ENST00000398559 ZNF397Q8NF99 534 aaPredicted RBP13.8□□□□□ -0.2
TMF1-201ENST00000398559 JAKMIP3Q5VZ66 844 aa13.8□□□□□ -0.2
TMF1-201ENST00000398559 GBP3Q9H0R5 595 aa13.8□□□□□ -0.2
TMF1-201ENST00000398559 CEP131Q9UPN4 1083 aa13.8□□□□□ -0.2
TMF1-201ENST00000398559 PDIA4P13667 645 aaKnown RBP13.8□□□□□ -0.2
TMF1-201ENST00000398559 BTBD11A6QL63 1104 aa13.79□□□□□ -0.2
TMF1-201ENST00000398559 ZSCAN12O43309 604 aa13.79□□□□□ -0.2
TMF1-201ENST00000398559 FAM69CQ0P6D2 419 aa13.79□□□□□ -0.2
TMF1-201ENST00000398559 PODXL2Q9NZ53 605 aa13.79□□□□□ -0.2
TMF1-201ENST00000398559 RRS1Q15050 365 aaKnown RBP13.79□□□□□ -0.2
TMF1-201ENST00000398559 IMMTQ16891 758 aaKnown RBP13.79□□□□□ -0.2
TMF1-201ENST00000398559 AFAP1Q8N556 730 aa13.79□□□□□ -0.2
TMF1-201ENST00000398559 KIF18AQ8NI77 898 aa13.79□□□□□ -0.2
TMF1-201ENST00000398559 SHTN1A0MZ66 631 aa13.79□□□□□ -0.2
TMF1-201ENST00000398559 EZRP15311 586 aaKnown RBP13.79□□□□□ -0.2
TMF1-201ENST00000398559 PRPF40BQ6NWY9 871 aaKnown RBP13.79□□□□□ -0.2
TMF1-201ENST00000398559 INCENPQ9NQS7 918 aa13.79□□□□□ -0.2
TMF1-201ENST00000398559 ANO10Q9NW15 660 aa13.79□□□□□ -0.2
TMF1-201ENST00000398559 CLIP2Q9UDT6 1046 aa13.79□□□□□ -0.2
TMF1-201ENST00000398559 URI1O94763 535 aaPredicted RBP13.78□□□□□ -0.2
TMF1-201ENST00000398559 ANKRD30BQ9BXX2 1392 aa13.78□□□□□ -0.2
TMF1-201ENST00000398559 SSFA2P28290 1259 aa13.78□□□□□ -0.2
TMF1-201ENST00000398559 ZNF692Q9BU19 519 aaPredicted RBP13.78□□□□□ -0.2
TMF1-201ENST00000398559 TMPOP42166 694 aaKnown RBP13.78□□□□□ -0.2
TMF1-201ENST00000398559 KIF5CO60282 957 aa13.77□□□□□ -0.2
TMF1-201ENST00000398559 MX1P20591 662 aa13.77□□□□□ -0.2
TMF1-201ENST00000398559 CGNQ9P2M7 1197 aaKnown RBP13.77□□□□□ -0.2
TMF1-201ENST00000398559 CEP126Q9P2H0 1117 aa13.77□□□□□ -0.2
TMF1-201ENST00000398559 C20orf194Q5TEA3 1177 aa13.77□□□□□ -0.21
TMF1-201ENST00000398559 DDX54Q8TDD1 881 aaKnown RBP13.77□□□□□ -0.21
TMF1-201ENST00000398559 SPA17Q15506 151 aa13.77□□□□□ -0.21
TMF1-201ENST00000398559 TMX1Q9H3N1 280 aa13.77□□□□□ -0.21
TMF1-201ENST00000398559 ERICH3Q5RHP9 1530 aa13.77□□□□□ -0.21
TMF1-201ENST00000398559 SPG7Q9UQ90 795 aa13.77□□□□□ -0.21
TMF1-201ENST00000398559 C9orf84Q5VXU9 1444 aa13.76□□□□□ -0.21
TMF1-201ENST00000398559 SSR1P43307 286 aaKnown RBP13.76□□□□□ -0.21
TMF1-201ENST00000398559 NFE2L2Q16236 605 aa13.76□□□□□ -0.21
TMF1-201ENST00000398559 KLHL10Q6JEL2 608 aa13.76□□□□□ -0.21
TMF1-201ENST00000398559 TNPO1Q92973 898 aaKnown RBP13.76□□□□□ -0.21
TMF1-201ENST00000398559 RAI14Q9P0K7 980 aa13.76□□□□□ -0.21
TMF1-201ENST00000398559 GIMAP7Q8NHV1 300 aa13.76□□□□□ -0.21
TMF1-201ENST00000398559 ARAP1Q96P48 1450 aa13.76□□□□□ -0.21
TMF1-201ENST00000398559 POLR3GO15318 223 aaPredicted RBP13.76□□□□□ -0.21
TMF1-201ENST00000398559 FCHSD2O94868 740 aa13.76□□□□□ -0.21
TMF1-201ENST00000398559 TOP1P11387 765 aaKnown RBP13.76□□□□□ -0.21
TMF1-201ENST00000398559 TNNT1P13805 278 aa13.76□□□□□ -0.21
TMF1-201ENST00000398559 IDH1O75874 414 aaKnown RBP13.76□□□□□ -0.21
TMF1-201ENST00000398559 MAP9Q49MG5 647 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms