RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 FNBP4Q8N3X1 1017 aaPredicted RBP5.16□□□□□ -1.58
RPS4XP3-201ENST00000398541 ZNF784Q8NCA9 323 aaPredicted RBP5.16□□□□□ -1.58
RPS4XP3-201ENST00000398541 ZNF428Q96B54 188 aa5.16□□□□□ -1.58
RPS4XP3-201ENST00000398541 AGBL1Q96MI9 1066 aa5.16□□□□□ -1.58
RPS4XP3-201ENST00000398541 DNMT3LQ9UJW3 386 aa5.16□□□□□ -1.58
RPS4XP3-201ENST00000398541 TTLL8A6PVC2 850 aa5.15□□□□□ -1.59
RPS4XP3-201ENST00000398541 H3BM21 787 aa5.15□□□□□ -1.59
RPS4XP3-201ENST00000398541 SPINT1O43278 529 aa5.15□□□□□ -1.59
RPS4XP3-201ENST00000398541 HSP90B1P14625 803 aaKnown RBP5.15□□□□□ -1.59
RPS4XP3-201ENST00000398541 IRF5Q13568 498 aa5.15□□□□□ -1.59
RPS4XP3-201ENST00000398541 IRF7Q92985 503 aa5.15□□□□□ -1.59
RPS4XP3-201ENST00000398541 E9PSI1 815 aa5.14□□□□□ -1.59
RPS4XP3-201ENST00000398541 WIPF1O43516 503 aa5.14□□□□□ -1.59
RPS4XP3-201ENST00000398541 LILRA1O75019 489 aa5.14□□□□□ -1.59
RPS4XP3-201ENST00000398541 ADH1AP07327 375 aa5.14□□□□□ -1.59
RPS4XP3-201ENST00000398541 CDK11BP21127 795 aaKnown RBP5.14□□□□□ -1.59
RPS4XP3-201ENST00000398541 ADD1P35611 737 aaKnown RBP5.14□□□□□ -1.59
RPS4XP3-201ENST00000398541 INSM2Q96T92 566 aaPredicted RBP5.14□□□□□ -1.59
RPS4XP3-201ENST00000398541 TBC1D2BQ9UPU7 963 aa5.14□□□□□ -1.59
RPS4XP3-201ENST00000398541 CDK11AQ9UQ88 783 aaPredicted RBP5.14□□□□□ -1.59
RPS4XP3-201ENST00000398541 ZNF330Q9Y3S2 320 aaPredicted RBP5.14□□□□□ -1.59
RPS4XP3-201ENST00000398541 FIGNL2A6NMB9 653 aa5.13□□□□□ -1.59
RPS4XP3-201ENST00000398541 PATL2C9JE40 543 aaKnown RBP5.13□□□□□ -1.59
RPS4XP3-201ENST00000398541 CTSOP43234 321 aaPredicted RBP5.13□□□□□ -1.59
RPS4XP3-201ENST00000398541 MCCD1P59942 119 aaPredicted RBP5.13□□□□□ -1.59
RPS4XP3-201ENST00000398541 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.13□□□□□ -1.59
RPS4XP3-201ENST00000398541 ZNF592Q92610 1267 aa5.13□□□□□ -1.59
RPS4XP3-201ENST00000398541 TRIM52Q96A61 297 aa5.13□□□□□ -1.59
RPS4XP3-201ENST00000398541 ZNF395Q9H8N7 513 aaPredicted RBP5.13□□□□□ -1.59
RPS4XP3-201ENST00000398541 PRM3Q9NNZ6 103 aa5.13□□□□□ -1.59
RPS4XP3-201ENST00000398541 CYLDQ9NQC7 956 aa5.13□□□□□ -1.59
RPS4XP3-201ENST00000398541 ERBB4Q15303 1308 aa5.13□□□□□ -1.59
RPS4XP3-201ENST00000398541 PPFIA3O75145 1194 aa5.12□□□□□ -1.59
RPS4XP3-201ENST00000398541 GMPRP36959 345 aa5.12□□□□□ -1.59
RPS4XP3-201ENST00000398541 PTGIRP43119 386 aa5.12□□□□□ -1.59
RPS4XP3-201ENST00000398541 INSM1Q01101 510 aaPredicted RBP5.12□□□□□ -1.59
RPS4XP3-201ENST00000398541 RNF20Q5VTR2 975 aa5.12□□□□□ -1.59
RPS4XP3-201ENST00000398541 CCDC125Q86Z20 511 aa5.12□□□□□ -1.59
RPS4XP3-201ENST00000398541 KDF1Q8NAX2 398 aaPredicted RBP5.12□□□□□ -1.59
RPS4XP3-201ENST00000398541 POM121Q96HA1 1249 aa5.12□□□□□ -1.59
RPS4XP3-201ENST00000398541 PUS7Q96PZ0 661 aaKnown RBP5.12□□□□□ -1.59
RPS4XP3-201ENST00000398541 POLMQ9NP87 494 aaPredicted RBP5.12□□□□□ -1.59
RPS4XP3-201ENST00000398541 PPP1R15AO75807 674 aaPredicted RBP5.11□□□□□ -1.59
RPS4XP3-201ENST00000398541 PTSQ03393 145 aa5.11□□□□□ -1.59
RPS4XP3-201ENST00000398541 PDE4CQ08493 712 aa5.11□□□□□ -1.59
RPS4XP3-201ENST00000398541 VSIG8P0DPA2 414 aa5.1□□□□□ -1.59
RPS4XP3-201ENST00000398541 RNF217Q8TC41 542 aa5.1□□□□□ -1.59
RPS4XP3-201ENST00000398541 GDPD2Q9HCC8 539 aa5.1□□□□□ -1.59
RPS4XP3-201ENST00000398541 PCDHB11Q9Y5F2 797 aa5.1□□□□□ -1.59
RPS4XP3-201ENST00000398541 ATP5J2-PTCD1G3V325 749 aa5.09□□□□□ -1.59
RPS4XP3-201ENST00000398541 SCTRP47872 440 aa5.09□□□□□ -1.59
RPS4XP3-201ENST00000398541 ERVK-9P63128 1117 aa5.09□□□□□ -1.59
RPS4XP3-201ENST00000398541 CC2D2BQ6DHV5 1058 aa5.09□□□□□ -1.59
RPS4XP3-201ENST00000398541 CEP126Q9P2H0 1117 aa5.09□□□□□ -1.59
RPS4XP3-201ENST00000398541 AMOTL2Q9Y2J4 779 aa5.09□□□□□ -1.59
RPS4XP3-201ENST00000398541 ABL2P42684 1182 aa5.08□□□□□ -1.6
RPS4XP3-201ENST00000398541 EIF4G2P78344 907 aaKnown RBP eCLIP5.08□□□□□ -1.6
RPS4XP3-201ENST00000398541 KCNA1Q09470 495 aa5.08□□□□□ -1.6
RPS4XP3-201ENST00000398541 CCDC155Q8N6L0 562 aa5.08□□□□□ -1.6
RPS4XP3-201ENST00000398541 ESF1Q9H501 851 aaKnown RBP5.08□□□□□ -1.6
RPS4XP3-201ENST00000398541 COG6Q9Y2V7 657 aa5.08□□□□□ -1.6
RPS4XP3-201ENST00000398541 A0A1W2PRU2 124 aa5.07□□□□□ -1.6
RPS4XP3-201ENST00000398541 SLC35F4A4IF30 521 aa5.07□□□□□ -1.6
RPS4XP3-201ENST00000398541 MEN1O00255 615 aa5.07□□□□□ -1.6
RPS4XP3-201ENST00000398541 EIF5BO60841 1220 aaKnown RBP5.07□□□□□ -1.6
RPS4XP3-201ENST00000398541 VAC14Q08AM6 782 aa5.07□□□□□ -1.6
RPS4XP3-201ENST00000398541 LYSMD3Q7Z3D4 306 aa5.07□□□□□ -1.6
RPS4XP3-201ENST00000398541 CCDC85AQ96PX6 553 aaPredicted RBP5.07□□□□□ -1.6
RPS4XP3-201ENST00000398541 STK17AQ9UEE5 414 aa5.07□□□□□ -1.6
RPS4XP3-201ENST00000398541 RNF144AP50876 292 aaPredicted RBP5.06□□□□□ -1.6
RPS4XP3-201ENST00000398541 PRICKLE2Q7Z3G6 844 aa5.06□□□□□ -1.6
RPS4XP3-201ENST00000398541 CYP2U1Q7Z449 544 aa5.06□□□□□ -1.6
RPS4XP3-201ENST00000398541 OSBPL3Q9H4L5 887 aa5.06□□□□□ -1.6
RPS4XP3-201ENST00000398541 SENP3-EIF4A1A0A087X0R7 540 aa5.05□□□□□ -1.6
RPS4XP3-201ENST00000398541 BRD1O95696 1058 aa5.05□□□□□ -1.6
RPS4XP3-201ENST00000398541 MYCP01106 439 aaPredicted RBP5.05□□□□□ -1.6
RPS4XP3-201ENST00000398541 ITGA6P23229 1130 aa5.05□□□□□ -1.6
RPS4XP3-201ENST00000398541 GPC1P35052 558 aa5.05□□□□□ -1.6
RPS4XP3-201ENST00000398541 CLN3Q13286 438 aa5.05□□□□□ -1.6
RPS4XP3-201ENST00000398541 WASHC4Q2M389 1173 aa5.05□□□□□ -1.6
RPS4XP3-201ENST00000398541 TSGA10IPQ3SY00 556 aa5.05□□□□□ -1.6
RPS4XP3-201ENST00000398541 SLFNL1Q499Z3 407 aa5.05□□□□□ -1.6
RPS4XP3-201ENST00000398541 ZSCAN1Q8NBB4 408 aa5.05□□□□□ -1.6
RPS4XP3-201ENST00000398541 NLRP3Q96P20 1036 aa5.05□□□□□ -1.6
RPS4XP3-201ENST00000398541 CDCA7Q9BWT1 371 aaPredicted RBP5.05□□□□□ -1.6
RPS4XP3-201ENST00000398541 ACIN1Q9UKV3 1341 aaKnown RBP5.04□□□□□ -1.6
RPS4XP3-201ENST00000398541 RHOQP17081 205 aa5.04□□□□□ -1.6
RPS4XP3-201ENST00000398541 LORP23490 312 aaPredicted RBP5.04□□□□□ -1.6
RPS4XP3-201ENST00000398541 SLC27A3Q5K4L6 730 aa5.04□□□□□ -1.6
RPS4XP3-201ENST00000398541 RNF135Q8IUD6 432 aa5.04□□□□□ -1.6
RPS4XP3-201ENST00000398541 VWA5B2Q8N398 1253 aa5.04□□□□□ -1.6
RPS4XP3-201ENST00000398541 PHTF2Q8N3S3 785 aa5.04□□□□□ -1.6
RPS4XP3-201ENST00000398541 GPR161Q8N6U8 529 aaKnown RBP5.04□□□□□ -1.6
RPS4XP3-201ENST00000398541 NANOS1Q8WY41 292 aaKnown RBP5.04□□□□□ -1.6
RPS4XP3-201ENST00000398541 ARHGEF10LQ9HCE6 1279 aa5.04□□□□□ -1.6
RPS4XP3-201ENST00000398541 RAB6BQ9NRW1 208 aa5.04□□□□□ -1.6
RPS4XP3-201ENST00000398541 USP35Q9P2H5 1018 aa5.04□□□□□ -1.6
RPS4XP3-201ENST00000398541 DOLKQ9UPQ8 538 aa5.04□□□□□ -1.6
RPS4XP3-201ENST00000398541 USTQ9Y2C2 406 aa5.04□□□□□ -1.6
RPS4XP3-201ENST00000398541 CDC14CA4D256 554 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms