RNA–Protein interactions for RNA: ENST00000398453.7

SMAGP-202, Transcript of small cell adhesion glycoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAGP, Length 1,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAGP-202ENST00000398453 WWC1Q8IX03 1113 aa21.44■■□□□ 1.02
SMAGP-202ENST00000398453 TRIM35Q9UPQ4 493 aa21.44■■□□□ 1.02
SMAGP-202ENST00000398453 OVOS2A0A0G2JMS6 1433 aa21.44■■□□□ 1.02
SMAGP-202ENST00000398453 BCL9LQ86UU0 1499 aa21.44■■□□□ 1.02
SMAGP-202ENST00000398453 LMOD3Q0VAK6 560 aa21.43■■□□□ 1.02
SMAGP-202ENST00000398453 PLEKHO1Q53GL0 409 aaPredicted RBP21.43■■□□□ 1.02
SMAGP-202ENST00000398453 PHF23Q9BUL5 403 aaPredicted RBP21.43■■□□□ 1.02
SMAGP-202ENST00000398453 AMOTQ4VCS5 1084 aa21.42■■□□□ 1.02
SMAGP-202ENST00000398453 FNBP4Q8N3X1 1017 aaPredicted RBP21.42■■□□□ 1.02
SMAGP-202ENST00000398453 PLEKHG2Q9H7P9 1386 aa21.42■■□□□ 1.02
SMAGP-202ENST00000398453 MAP3K5Q99683 1374 aa21.41■■□□□ 1.02
SMAGP-202ENST00000398453 AFF2P51816 1311 aa21.41■■□□□ 1.02
SMAGP-202ENST00000398453 IL2RBP14784 551 aa21.41■■□□□ 1.02
SMAGP-202ENST00000398453 ZNF530Q6P9A1 599 aaPredicted RBP21.41■■□□□ 1.02
SMAGP-202ENST00000398453 USP21Q9UK80 565 aa21.41■■□□□ 1.02
SMAGP-202ENST00000398453 CCDC9Q9Y3X0 531 aaKnown RBP21.41■■□□□ 1.02
SMAGP-202ENST00000398453 SPATA31A1Q5TZJ5 1347 aa21.4■■□□□ 1.02
SMAGP-202ENST00000398453 DISP2A7MBM2 1401 aa21.39■■□□□ 1.02
SMAGP-202ENST00000398453 SPATA31A5Q5VU36 1347 aa21.39■■□□□ 1.01
SMAGP-202ENST00000398453 SPATA31A7Q8IWB4 1347 aa21.39■■□□□ 1.01
SMAGP-202ENST00000398453 SHANK3Q9BYB0 1731 aa21.39■■□□□ 1.01
SMAGP-202ENST00000398453 GOLGA2Q08379 1002 aa21.39■■□□□ 1.01
SMAGP-202ENST00000398453 PDE3BQ13370 1112 aa21.39■■□□□ 1.01
SMAGP-202ENST00000398453 CDCA7LQ96GN5 454 aa21.38■■□□□ 1.01
SMAGP-202ENST00000398453 SPG7Q9UQ90 795 aa21.38■■□□□ 1.01
SMAGP-202ENST00000398453 VIRMAQ69YN4 1812 aaKnown RBP21.38■■□□□ 1.01
SMAGP-202ENST00000398453 LRRC37A3O60309 1634 aa21.37■■□□□ 1.01
SMAGP-202ENST00000398453 DCTN1Q14203 1278 aa21.37■■□□□ 1.01
SMAGP-202ENST00000398453 VPS72Q15906 364 aa21.37■■□□□ 1.01
SMAGP-202ENST00000398453 WDR63Q8IWG1 891 aa21.37■■□□□ 1.01
SMAGP-202ENST00000398453 THUMPD2Q9BTF0 503 aaKnown RBP21.37■■□□□ 1.01
SMAGP-202ENST00000398453 GNAT3A8MTJ3 354 aa21.36■■□□□ 1.01
SMAGP-202ENST00000398453 C1orf141Q5JVX7 400 aa21.36■■□□□ 1.01
SMAGP-202ENST00000398453 MCM10Q7L590 875 aa21.36■■□□□ 1.01
SMAGP-202ENST00000398453 RTF1Q92541 710 aaKnown RBP21.36■■□□□ 1.01
SMAGP-202ENST00000398453 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.36■■□□□ 1.01
SMAGP-202ENST00000398453 AKAP4Q5JQC9 854 aa21.35■■□□□ 1.01
SMAGP-202ENST00000398453 THRAP3Q9Y2W1 955 aaKnown RBP21.35■■□□□ 1.01
SMAGP-202ENST00000398453 ZCRB1Q8TBF4 217 aaKnown RBP21.34■■□□□ 1.01
SMAGP-202ENST00000398453 SPINK5Q9NQ38 1064 aaPredicted RBP21.34■■□□□ 1.01
SMAGP-202ENST00000398453 ATRNO75882 1429 aa21.33■■□□□ 1.01
SMAGP-202ENST00000398453 HTATSF1O43719 755 aaKnown RBP21.33■■□□□ 1.01
SMAGP-202ENST00000398453 CALD1Q05682 793 aaKnown RBP21.33■■□□□ 1.01
SMAGP-202ENST00000398453 PCDH11XQ9BZA7 1347 aa21.32■■□□□ 1
SMAGP-202ENST00000398453 PCDH11YQ9BZA8 1340 aa21.32■■□□□ 1
SMAGP-202ENST00000398453 E9PSI1 815 aa21.32■■□□□ 1
SMAGP-202ENST00000398453 SLFN5Q08AF3 891 aa21.32■■□□□ 1
SMAGP-202ENST00000398453 GLI3P10071 1580 aa21.31■■□□□ 1
SMAGP-202ENST00000398453 IL16Q14005 1332 aa21.31■■□□□ 1
SMAGP-202ENST00000398453 ADAMTS7Q9UKP4 1686 aa21.31■■□□□ 1
SMAGP-202ENST00000398453 TNS2Q63HR2 1409 aa21.31■■□□□ 1
SMAGP-202ENST00000398453 SCN11AQ9UI33 1791 aa21.31■■□□□ 1
SMAGP-202ENST00000398453 PHKG2P15735 406 aa21.31■■□□□ 1
SMAGP-202ENST00000398453 CYP27B1O15528 508 aa21.3■■□□□ 1
SMAGP-202ENST00000398453 BARGINQ6ZT62 677 aa21.3■■□□□ 1
SMAGP-202ENST00000398453 IFNL2Q8IZJ0 200 aa21.3■■□□□ 1
SMAGP-202ENST00000398453 CDCA7Q9BWT1 371 aaPredicted RBP21.3■■□□□ 1
SMAGP-202ENST00000398453 LAS1LQ9Y4W2 734 aaKnown RBP21.3■■□□□ 1
SMAGP-202ENST00000398453 MPRIPQ6WCQ1 1025 aa21.29■■□□□ 1
SMAGP-202ENST00000398453 TRPC5Q9UL62 973 aaPredicted RBP21.29■■□□□ 1
SMAGP-202ENST00000398453 FAM98CQ17RN3 349 aaKnown RBP21.28■■□□□ 1
SMAGP-202ENST00000398453 DUSP27Q5VZP5 1158 aa21.28■■□□□ 1
SMAGP-202ENST00000398453 IL17REQ8NFR9 667 aa21.28■■□□□ 1
SMAGP-202ENST00000398453 MYH16Q9H6N6 1097 aa21.28■■□□□ 1
SMAGP-202ENST00000398453 KDM6AO15550 1401 aaPredicted RBP21.28■■□□□ 1
SMAGP-202ENST00000398453 THSD7AQ9UPZ6 1657 aa21.28■■□□□ 1
SMAGP-202ENST00000398453 CEMIPQ8WUJ3 1361 aa21.27■■□□□ 1
SMAGP-202ENST00000398453 RNMTO43148 476 aaKnown RBP21.27■■□□□ 1
SMAGP-202ENST00000398453 TRMT2AQ8IZ69 625 aaKnown RBP21.27■■□□□ 1
SMAGP-202ENST00000398453 DDX54Q8TDD1 881 aaKnown RBP21.27■■□□□ 1
SMAGP-202ENST00000398453 LGR6Q9HBX8 967 aa21.27■■□□□ 1
SMAGP-202ENST00000398453 IFT57Q9NWB7 429 aa21.27■■□□□ 1
SMAGP-202ENST00000398453 FANCIQ9NVI1 1328 aa21.27■□□□□ 0.99
SMAGP-202ENST00000398453 EXOC5O00471 708 aa21.26■□□□□ 0.99
SMAGP-202ENST00000398453 HSP90AB1P08238 724 aaKnown RBP21.26■□□□□ 0.99
SMAGP-202ENST00000398453 GNAI1P63096 354 aa21.26■□□□□ 0.99
SMAGP-202ENST00000398453 TSR2Q969E8 191 aaKnown RBP21.26■□□□□ 0.99
SMAGP-202ENST00000398453 SIPA1L3O60292 1781 aaPredicted RBP21.25■□□□□ 0.99
SMAGP-202ENST00000398453 GJD4Q96KN9 370 aaPredicted RBP21.25■□□□□ 0.99
SMAGP-202ENST00000398453 A0A0G2JS52 829 aa21.24■□□□□ 0.99
SMAGP-202ENST00000398453 MYT1Q01538 1121 aa21.24■□□□□ 0.99
SMAGP-202ENST00000398453 DDB1Q16531 1140 aa21.24■□□□□ 0.99
SMAGP-202ENST00000398453 QTRT2Q9H974 415 aaKnown RBP21.24■□□□□ 0.99
SMAGP-202ENST00000398453 TOGARAM1Q9Y4F4 1720 aa21.24■□□□□ 0.99
SMAGP-202ENST00000398453 ZNF853P0CG23 659 aa21.23■□□□□ 0.99
SMAGP-202ENST00000398453 DCAF5Q96JK2 942 aa21.23■□□□□ 0.99
SMAGP-202ENST00000398453 CFAP44Q96MT7 982 aa21.23■□□□□ 0.99
SMAGP-202ENST00000398453 MRC1P22897 1456 aa21.23■□□□□ 0.99
SMAGP-202ENST00000398453 TEFQ10587 303 aa21.22■□□□□ 0.99
SMAGP-202ENST00000398453 ZNF772Q68DY9 489 aaPredicted RBP21.22■□□□□ 0.99
SMAGP-202ENST00000398453 MBIPQ9NS73 344 aa21.22■□□□□ 0.99
SMAGP-202ENST00000398453 KDM3BQ7LBC6 1761 aa21.21■□□□□ 0.99
SMAGP-202ENST00000398453 NKX1-1Q15270 411 aaPredicted RBP21.2■□□□□ 0.98
SMAGP-202ENST00000398453 TSPYL4Q9UJ04 414 aa21.2■□□□□ 0.98
SMAGP-202ENST00000398453 DOT1LQ8TEK3 1739 aa21.2■□□□□ 0.98
SMAGP-202ENST00000398453 CHL1O00533 1208 aa21.19■□□□□ 0.98
SMAGP-202ENST00000398453 TAF7Q15545 349 aaPredicted RBP21.19■□□□□ 0.98
SMAGP-202ENST00000398453 MIS18AQ9NYP9 233 aa21.19■□□□□ 0.98
SMAGP-202ENST00000398453 SLC52A2Q9HAB3 445 aa21.18■□□□□ 0.98
SMAGP-202ENST00000398453 EXOSC9Q06265 439 aaKnown RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms