RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 NBPF4Q96M43 638 aa34.7■■■■□ 3.15
U2AF1-203ENST00000398137 HSP90AB2PQ58FF8 381 aa34.69■■■■□ 3.14
U2AF1-203ENST00000398137 INSRP06213 1382 aa34.68■■■■□ 3.14
U2AF1-203ENST00000398137 TXNRD1Q16881 649 aa34.67■■■■□ 3.14
U2AF1-203ENST00000398137 FLT4P35916 1363 aa34.66■■■■□ 3.14
U2AF1-203ENST00000398137 KIF24Q5T7B8 1368 aa34.65■■■■□ 3.14
U2AF1-203ENST00000398137 USHBP1Q8N6Y0 703 aa34.65■■■■□ 3.14
U2AF1-203ENST00000398137 EMILIN1Q9Y6C2 1016 aa34.65■■■■□ 3.14
U2AF1-203ENST00000398137 CASZ1Q86V15 1759 aa34.64■■■■□ 3.14
U2AF1-203ENST00000398137 DDX54Q8TDD1 881 aaKnown RBP34.64■■■■□ 3.14
U2AF1-203ENST00000398137 KAT6BQ8WYB5 2073 aa34.63■■■■□ 3.13
U2AF1-203ENST00000398137 CNGB1Q14028 1251 aaPredicted RBP34.63■■■■□ 3.13
U2AF1-203ENST00000398137 CC2D1BQ5T0F9 858 aaKnown RBP34.63■■■■□ 3.13
U2AF1-203ENST00000398137 MAP2P11137 1827 aaKnown RBP34.62■■■■□ 3.13
U2AF1-203ENST00000398137 NPC1L1Q9UHC9 1359 aa34.61■■■■□ 3.13
U2AF1-203ENST00000398137 MORC1Q86VD1 984 aa34.6■■■■□ 3.13
U2AF1-203ENST00000398137 PDGFDQ9GZP0 370 aaPredicted RBP34.6■■■■□ 3.13
U2AF1-203ENST00000398137 DOT1LQ8TEK3 1739 aa34.6■■■■□ 3.13
U2AF1-203ENST00000398137 PAPPAQ13219 1627 aa34.59■■■■□ 3.13
U2AF1-203ENST00000398137 SMG6Q86US8 1419 aaKnown RBP34.59■■■■□ 3.13
U2AF1-203ENST00000398137 TNNT2P45379 298 aaPredicted RBP34.59■■■■□ 3.13
U2AF1-203ENST00000398137 ZCRB1Q8TBF4 217 aaKnown RBP34.58■■■■□ 3.13
U2AF1-203ENST00000398137 NCAPD2Q15021 1401 aa34.55■■■■□ 3.12
U2AF1-203ENST00000398137 POLKQ9UBT6 870 aa34.52■■■■□ 3.12
U2AF1-203ENST00000398137 LRRC4BQ9NT99 713 aa34.51■■■■□ 3.12
U2AF1-203ENST00000398137 PRIM1P49642 420 aaKnown RBP34.5■■■■□ 3.11
U2AF1-203ENST00000398137 SLC15A2Q16348 729 aa34.5■■■■□ 3.11
U2AF1-203ENST00000398137 RAPGEF4Q8WZA2 1011 aa34.49■■■■□ 3.11
U2AF1-203ENST00000398137 PPM1GO15355 546 aaPredicted RBP34.48■■■■□ 3.11
U2AF1-203ENST00000398137 SPON1Q9HCB6 807 aa34.48■■■■□ 3.11
U2AF1-203ENST00000398137 PKD1L3Q7Z443 1732 aa34.47■■■■□ 3.11
U2AF1-203ENST00000398137 LY75O60449 1722 aa34.47■■■■□ 3.11
U2AF1-203ENST00000398137 TATP17735 454 aaPredicted RBP34.46■■■■□ 3.11
U2AF1-203ENST00000398137 STK32BQ9NY57 414 aa34.46■■■■□ 3.11
U2AF1-203ENST00000398137 SYTL4Q96C24 671 aaPredicted RBP34.43■■■■□ 3.1
U2AF1-203ENST00000398137 TOGARAM1Q9Y4F4 1720 aa34.42■■■■□ 3.1
U2AF1-203ENST00000398137 ZNF827Q17R98 1081 aa34.42■■■■□ 3.1
U2AF1-203ENST00000398137 EYA1Q99502 592 aa34.42■■■■□ 3.1
U2AF1-203ENST00000398137 CYP27B1O15528 508 aa34.41■■■■□ 3.1
U2AF1-203ENST00000398137 ZBTB7AO95365 584 aa34.39■■■■□ 3.1
U2AF1-203ENST00000398137 PCDH11XQ9BZA7 1347 aa34.38■■■■□ 3.09
U2AF1-203ENST00000398137 PCDH11YQ9BZA8 1340 aa34.38■■■■□ 3.09
U2AF1-203ENST00000398137 KCNQ4P56696 695 aa34.38■■■■□ 3.09
U2AF1-203ENST00000398137 PTGER2P43116 358 aa34.37■■■■□ 3.09
U2AF1-203ENST00000398137 EIF4A2Q14240 407 aaKnown RBP34.37■■■■□ 3.09
U2AF1-203ENST00000398137 SLC27A3Q5K4L6 730 aa34.36■■■■□ 3.09
U2AF1-203ENST00000398137 AKT1S1Q96B36 256 aa34.36■■■■□ 3.09
U2AF1-203ENST00000398137 TUBGCP6Q96RT7 1819 aa34.36■■■■□ 3.09
U2AF1-203ENST00000398137 ITGB4P16144 1822 aa34.34■■■■□ 3.09
U2AF1-203ENST00000398137 QSER1Q2KHR3 1735 aa34.34■■■■□ 3.09
U2AF1-203ENST00000398137 ATF5Q9Y2D1 282 aaPredicted RBP34.33■■■■□ 3.09
U2AF1-203ENST00000398137 MTHFSP49914 203 aa34.31■■■■□ 3.08
U2AF1-203ENST00000398137 SGIP1Q9BQI5 828 aa34.31■■■■□ 3.08
U2AF1-203ENST00000398137 PPP2R1AP30153 589 aa34.3■■■■□ 3.08
U2AF1-203ENST00000398137 PPP1R1BQ9UD71 204 aaPredicted RBP34.29■■■■□ 3.08
U2AF1-203ENST00000398137 NKX1-1Q15270 411 aaPredicted RBP34.28■■■■□ 3.08
U2AF1-203ENST00000398137 RALBP1Q15311 655 aa34.27■■■■□ 3.08
U2AF1-203ENST00000398137 MTFR1LQ9H019 292 aa34.27■■■■□ 3.08
U2AF1-203ENST00000398137 IGSF1Q8N6C5 1336 aa34.27■■■■□ 3.08
U2AF1-203ENST00000398137 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.25■■■■□ 3.07
U2AF1-203ENST00000398137 PNPLA7Q6ZV29 1317 aa34.25■■■■□ 3.07
U2AF1-203ENST00000398137 CCNL1Q9UK58 526 aaPredicted RBP34.24■■■■□ 3.07
U2AF1-203ENST00000398137 SPG7Q9UQ90 795 aa34.24■■■■□ 3.07
U2AF1-203ENST00000398137 MPRIPQ6WCQ1 1025 aa34.23■■■■□ 3.07
U2AF1-203ENST00000398137 PRKRIP1Q9H875 184 aaPredicted RBP34.23■■■■□ 3.07
U2AF1-203ENST00000398137 COL24A1Q17RW2 1714 aa34.23■■■■□ 3.07
U2AF1-203ENST00000398137 TAF1LQ8IZX4 1826 aa34.22■■■■□ 3.07
U2AF1-203ENST00000398137 C5P01031 1676 aa34.22■■■■□ 3.07
U2AF1-203ENST00000398137 PHKG2P15735 406 aa34.19■■■■□ 3.06
U2AF1-203ENST00000398137 PIGBQ92521 554 aa34.19■■■■□ 3.06
U2AF1-203ENST00000398137 PALLDQ8WX93 1383 aa34.19■■■■□ 3.06
U2AF1-203ENST00000398137 COL3A1P02461 1466 aaPredicted RBP34.19■■■■□ 3.06
U2AF1-203ENST00000398137 MYBBP1AQ9BQG0 1328 aaKnown RBP34.18■■■■□ 3.06
U2AF1-203ENST00000398137 PLEKHG2Q9H7P9 1386 aa34.17■■■■□ 3.06
U2AF1-203ENST00000398137 TFCP2L1Q9NZI6 479 aa34.16■■■■□ 3.06
U2AF1-203ENST00000398137 ANP32CO43423 234 aa34.14■■■■□ 3.06
U2AF1-203ENST00000398137 AEBP1Q8IUX7 1158 aa34.14■■■■□ 3.06
U2AF1-203ENST00000398137 IFNL2Q8IZJ0 200 aa34.14■■■■□ 3.06
U2AF1-203ENST00000398137 CFAP53Q96M91 514 aa34.14■■■■□ 3.06
U2AF1-203ENST00000398137 FHDC1Q9C0D6 1143 aaPredicted RBP34.12■■■■□ 3.05
U2AF1-203ENST00000398137 IL13P35225 146 aa34.11■■■■□ 3.05
U2AF1-203ENST00000398137 SLC16A10Q8TF71 515 aa34.11■■■■□ 3.05
U2AF1-203ENST00000398137 DIAPH1O60610 1272 aaKnown RBP34.1■■■■□ 3.05
U2AF1-203ENST00000398137 SYT17Q9BSW7 474 aa34.09■■■■□ 3.05
U2AF1-203ENST00000398137 C4BP0C0L5 1744 aa34.09■■■■□ 3.05
U2AF1-203ENST00000398137 COL23A1Q86Y22 540 aaPredicted RBP34.08■■■■□ 3.05
U2AF1-203ENST00000398137 ARXQ96QS3 562 aa34.08■■■■□ 3.05
U2AF1-203ENST00000398137 SMARCC1Q92922 1105 aaPredicted RBP34.07■■■■□ 3.04
U2AF1-203ENST00000398137 KDRP35968 1356 aa34.07■■■■□ 3.04
U2AF1-203ENST00000398137 ASAP1Q9ULH1 1129 aa34.06■■■■□ 3.04
U2AF1-203ENST00000398137 KDM6AO15550 1401 aaPredicted RBP34.05■■■■□ 3.04
U2AF1-203ENST00000398137 AMIGO3Q86WK7 504 aa34.05■■■■□ 3.04
U2AF1-203ENST00000398137 TMOD3Q9NYL9 352 aa34.05■■■■□ 3.04
U2AF1-203ENST00000398137 UBR3Q6ZT12 1888 aa34.03■■■■□ 3.04
U2AF1-203ENST00000398137 SULT6B1Q6IMI4 303 aa34.03■■■■□ 3.04
U2AF1-203ENST00000398137 MAP3K5Q99683 1374 aa34.02■■■■□ 3.04
U2AF1-203ENST00000398137 PLEKHO1Q53GL0 409 aaPredicted RBP34.02■■■■□ 3.04
U2AF1-203ENST00000398137 ATG3Q9NT62 314 aa34.02■■■■□ 3.04
U2AF1-203ENST00000398137 UTRNP46939 3433 aa34.01■■■■□ 3.03
U2AF1-203ENST00000398137 LOC102724428A0A0B4J2F2 783 aa34■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms