RNA–Protein interactions for RNA: ENST00000397893.3

SUMO3-202, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-202ENST00000397893 USP47Q96K76 1375 aa9.59□□□□□ -0.87
SUMO3-202ENST00000397893 TMF1P82094 1093 aa9.58□□□□□ -0.88
SUMO3-202ENST00000397893 RRS1Q15050 365 aaKnown RBP9.58□□□□□ -0.88
SUMO3-202ENST00000397893 AKT1S1Q96B36 256 aa9.58□□□□□ -0.88
SUMO3-202ENST00000397893 ATF5Q9Y2D1 282 aaPredicted RBP9.58□□□□□ -0.88
SUMO3-202ENST00000397893 NSD2O96028 1365 aa9.58□□□□□ -0.88
SUMO3-202ENST00000397893 NHSQ6T4R5 1651 aa9.58□□□□□ -0.88
SUMO3-202ENST00000397893 PAPPAQ13219 1627 aa9.57□□□□□ -0.88
SUMO3-202ENST00000397893 MSH5O43196 834 aa9.57□□□□□ -0.88
SUMO3-202ENST00000397893 AMPHP49418 695 aa9.57□□□□□ -0.88
SUMO3-202ENST00000397893 DDX54Q8TDD1 881 aaKnown RBP9.57□□□□□ -0.88
SUMO3-202ENST00000397893 MTFR1LQ9H019 292 aa9.57□□□□□ -0.88
SUMO3-202ENST00000397893 PPP1R1BQ9UD71 204 aaPredicted RBP9.57□□□□□ -0.88
SUMO3-202ENST00000397893 TIMELESSQ9UNS1 1208 aa9.57□□□□□ -0.88
SUMO3-202ENST00000397893 RTL1A6NKG5 1358 aa9.57□□□□□ -0.88
SUMO3-202ENST00000397893 LTN1O94822 1766 aa9.57□□□□□ -0.88
SUMO3-202ENST00000397893 MEGF6O75095 1541 aa9.56□□□□□ -0.88
SUMO3-202ENST00000397893 FAM208AQ9UK61 1670 aaKnown RBP9.56□□□□□ -0.88
SUMO3-202ENST00000397893 ATXN8OSP0DMR3 200 aa9.56□□□□□ -0.88
SUMO3-202ENST00000397893 PRIM1P49642 420 aaKnown RBP9.56□□□□□ -0.88
SUMO3-202ENST00000397893 HSP90AB2PQ58FF8 381 aa9.56□□□□□ -0.88
SUMO3-202ENST00000397893 ZCRB1Q8TBF4 217 aaKnown RBP9.56□□□□□ -0.88
SUMO3-202ENST00000397893 INSRP06213 1382 aa9.55□□□□□ -0.88
SUMO3-202ENST00000397893 SLC27A3Q5K4L6 730 aa9.55□□□□□ -0.88
SUMO3-202ENST00000397893 SYT17Q9BSW7 474 aa9.55□□□□□ -0.88
SUMO3-202ENST00000397893 KIF24Q5T7B8 1368 aa9.54□□□□□ -0.88
SUMO3-202ENST00000397893 YY1P25490 414 aa9.54□□□□□ -0.88
SUMO3-202ENST00000397893 KCNQ4P56696 695 aa9.54□□□□□ -0.88
SUMO3-202ENST00000397893 CDCA8Q53HL2 280 aa9.54□□□□□ -0.88
SUMO3-202ENST00000397893 USHBP1Q8N6Y0 703 aa9.54□□□□□ -0.88
SUMO3-202ENST00000397893 FHDC1Q9C0D6 1143 aaPredicted RBP9.54□□□□□ -0.88
SUMO3-202ENST00000397893 CGNL1Q0VF96 1302 aa9.54□□□□□ -0.88
SUMO3-202ENST00000397893 PNPLA7Q6ZV29 1317 aa9.54□□□□□ -0.88
SUMO3-202ENST00000397893 MAP3K5Q99683 1374 aa9.53□□□□□ -0.88
SUMO3-202ENST00000397893 BTAF1O14981 1849 aa9.53□□□□□ -0.88
SUMO3-202ENST00000397893 CYP27B1O15528 508 aa9.52□□□□□ -0.89
SUMO3-202ENST00000397893 NCAPD2Q15021 1401 aa9.52□□□□□ -0.89
SUMO3-202ENST00000397893 SLC16A10Q8TF71 515 aa9.52□□□□□ -0.89
SUMO3-202ENST00000397893 ARXQ96QS3 562 aa9.52□□□□□ -0.89
SUMO3-202ENST00000397893 EMILIN1Q9Y6C2 1016 aa9.52□□□□□ -0.89
SUMO3-202ENST00000397893 MYOM1P52179 1685 aa9.51□□□□□ -0.89
SUMO3-202ENST00000397893 FLT4P35916 1363 aa9.51□□□□□ -0.89
SUMO3-202ENST00000397893 NSD3Q9BZ95 1437 aa9.51□□□□□ -0.89
SUMO3-202ENST00000397893 RAPGEF4Q8WZA2 1011 aa9.51□□□□□ -0.89
SUMO3-202ENST00000397893 SYTL4Q96C24 671 aaPredicted RBP9.51□□□□□ -0.89
SUMO3-202ENST00000397893 WASHC2AQ641Q2 1341 aa9.51□□□□□ -0.89
SUMO3-202ENST00000397893 SHANK3Q9BYB0 1731 aa9.51□□□□□ -0.89
SUMO3-202ENST00000397893 TATP17735 454 aaPredicted RBP9.5□□□□□ -0.89
SUMO3-202ENST00000397893 NKX1-1Q15270 411 aaPredicted RBP9.5□□□□□ -0.89
SUMO3-202ENST00000397893 MAPK8IP2Q13387 824 aaPredicted RBP9.49□□□□□ -0.89
SUMO3-202ENST00000397893 COL23A1Q86Y22 540 aaPredicted RBP9.49□□□□□ -0.89
SUMO3-202ENST00000397893 POLKQ9UBT6 870 aa9.49□□□□□ -0.89
SUMO3-202ENST00000397893 CCNL1Q9UK58 526 aaPredicted RBP9.49□□□□□ -0.89
SUMO3-202ENST00000397893 RGPD2P0DJD1 1756 aa9.49□□□□□ -0.89
SUMO3-202ENST00000397893 KAT6BQ8WYB5 2073 aa9.49□□□□□ -0.89
SUMO3-202ENST00000397893 UTRNP46939 3433 aa9.49□□□□□ -0.89
SUMO3-202ENST00000397893 DCAF8L1A6NGE4 600 aa9.48□□□□□ -0.89
SUMO3-202ENST00000397893 EYA1Q99502 592 aa9.48□□□□□ -0.89
SUMO3-202ENST00000397893 TFCP2L1Q9NZI6 479 aa9.48□□□□□ -0.89
SUMO3-202ENST00000397893 PCDH11XQ9BZA7 1347 aa9.48□□□□□ -0.89
SUMO3-202ENST00000397893 PCDH11YQ9BZA8 1340 aa9.48□□□□□ -0.89
SUMO3-202ENST00000397893 SMG6Q86US8 1419 aaKnown RBP9.48□□□□□ -0.89
SUMO3-202ENST00000397893 HOXD11P31277 338 aaPredicted RBP9.47□□□□□ -0.89
SUMO3-202ENST00000397893 AMIGO3Q86WK7 504 aa9.47□□□□□ -0.89
SUMO3-202ENST00000397893 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.47□□□□□ -0.89
SUMO3-202ENST00000397893 COL24A1Q17RW2 1714 aa9.47□□□□□ -0.89
SUMO3-202ENST00000397893 LY75O60449 1722 aa9.46□□□□□ -0.89
SUMO3-202ENST00000397893 MPRIPQ6WCQ1 1025 aa9.46□□□□□ -0.9
SUMO3-202ENST00000397893 ZNF784Q8NCA9 323 aaPredicted RBP9.46□□□□□ -0.9
SUMO3-202ENST00000397893 PIGBQ92521 554 aa9.46□□□□□ -0.9
SUMO3-202ENST00000397893 PALLDQ8WX93 1383 aa9.46□□□□□ -0.9
SUMO3-202ENST00000397893 DOT1LQ8TEK3 1739 aa9.45□□□□□ -0.9
SUMO3-202ENST00000397893 SLC4A2P04920 1241 aa9.45□□□□□ -0.9
SUMO3-202ENST00000397893 HSPA5P11021 654 aaKnown RBP9.45□□□□□ -0.9
SUMO3-202ENST00000397893 POLD1P28340 1107 aa9.45□□□□□ -0.9
SUMO3-202ENST00000397893 EIF4A2Q14240 407 aaKnown RBP9.45□□□□□ -0.9
SUMO3-202ENST00000397893 NLGN2Q8NFZ4 835 aa9.45□□□□□ -0.9
SUMO3-202ENST00000397893 QSER1Q2KHR3 1735 aa9.45□□□□□ -0.9
SUMO3-202ENST00000397893 PPM1GO15355 546 aaPredicted RBP9.44□□□□□ -0.9
SUMO3-202ENST00000397893 SMARCC1Q92922 1105 aaPredicted RBP9.44□□□□□ -0.9
SUMO3-202ENST00000397893 PANK3Q9H999 370 aa9.44□□□□□ -0.9
SUMO3-202ENST00000397893 SPG7Q9UQ90 795 aa9.44□□□□□ -0.9
SUMO3-202ENST00000397893 KIF20BQ96Q89 1820 aa9.43□□□□□ -0.9
SUMO3-202ENST00000397893 IGSF1Q8N6C5 1336 aa9.43□□□□□ -0.9
SUMO3-202ENST00000397893 PHKG2P15735 406 aa9.43□□□□□ -0.9
SUMO3-202ENST00000397893 EIF4G2P78344 907 aaKnown RBP eCLIP9.43□□□□□ -0.93e-7■■■■■ 67
SUMO3-202ENST00000397893 SMIM5Q71RC9 77 aa9.43□□□□□ -0.9
SUMO3-202ENST00000397893 ANKRD26Q9UPS8 1709 aa9.42□□□□□ -0.9
SUMO3-202ENST00000397893 PLEKHG2Q9H7P9 1386 aa9.42□□□□□ -0.9
SUMO3-202ENST00000397893 LOC102724428A0A0B4J2F2 783 aa9.42□□□□□ -0.9
SUMO3-202ENST00000397893 YBX3P16989 372 aaKnown RBP eCLIP9.42□□□□□ -0.9
SUMO3-202ENST00000397893 SIK1P57059 783 aa9.42□□□□□ -0.9
SUMO3-202ENST00000397893 ITPK1Q13572 414 aa9.42□□□□□ -0.9
SUMO3-202ENST00000397893 LINC00116Q8NCU8 138 aa9.42□□□□□ -0.9
SUMO3-202ENST00000397893 FLAD1Q8NFF5 587 aa9.42□□□□□ -0.9
SUMO3-202ENST00000397893 ATG3Q9NT62 314 aa9.42□□□□□ -0.9
SUMO3-202ENST00000397893 ASAP1Q9ULH1 1129 aa9.42□□□□□ -0.9
SUMO3-202ENST00000397893 TUBGCP6Q96RT7 1819 aa9.42□□□□□ -0.9
SUMO3-202ENST00000397893 GOLGB1Q14789 3259 aaKnown RBP9.42□□□□□ -0.9
SUMO3-202ENST00000397893 PKD1L3Q7Z443 1732 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms