RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 PNPLA7Q6ZV29 1317 aa16.75■□□□□ 0.27
SYNE4-203ENST00000397428 SYTL4Q96C24 671 aaPredicted RBP16.75■□□□□ 0.27
SYNE4-203ENST00000397428 COL24A1Q17RW2 1714 aa16.75■□□□□ 0.27
SYNE4-203ENST00000397428 QSER1Q2KHR3 1735 aa16.75■□□□□ 0.27
SYNE4-203ENST00000397428 RGPD2P0DJD1 1756 aa16.74■□□□□ 0.27
SYNE4-203ENST00000397428 CGNL1Q0VF96 1302 aa16.74■□□□□ 0.27
SYNE4-203ENST00000397428 TMF1P82094 1093 aa16.74■□□□□ 0.27
SYNE4-203ENST00000397428 GGNBP2Q9H3C7 697 aa16.74■□□□□ 0.27
SYNE4-203ENST00000397428 TFCP2L1Q9NZI6 479 aa16.74■□□□□ 0.27
SYNE4-203ENST00000397428 RRS1Q15050 365 aaKnown RBP16.73■□□□□ 0.27
SYNE4-203ENST00000397428 RTL1A6NKG5 1358 aa16.73■□□□□ 0.27
SYNE4-203ENST00000397428 MEGF6O75095 1541 aa16.72■□□□□ 0.27
SYNE4-203ENST00000397428 LY75O60449 1722 aa16.72■□□□□ 0.27
SYNE4-203ENST00000397428 SHANK3Q9BYB0 1731 aa16.72■□□□□ 0.27
SYNE4-203ENST00000397428 POLD1P28340 1107 aa16.71■□□□□ 0.27
SYNE4-203ENST00000397428 HSP90AB2PQ58FF8 381 aa16.71■□□□□ 0.27
SYNE4-203ENST00000397428 INSRP06213 1382 aa16.7■□□□□ 0.26
SYNE4-203ENST00000397428 RAPGEF4Q8WZA2 1011 aa16.7■□□□□ 0.26
SYNE4-203ENST00000397428 CARD14Q9BXL6 1004 aa16.7■□□□□ 0.26
SYNE4-203ENST00000397428 CCNL1Q9UK58 526 aaPredicted RBP16.7■□□□□ 0.26
SYNE4-203ENST00000397428 CHD4Q14839 1912 aa16.7■□□□□ 0.26
SYNE4-203ENST00000397428 GPR162Q16538 588 aa16.69■□□□□ 0.26
SYNE4-203ENST00000397428 CDCA8Q53HL2 280 aa16.69■□□□□ 0.26
SYNE4-203ENST00000397428 COL23A1Q86Y22 540 aaPredicted RBP16.69■□□□□ 0.26
SYNE4-203ENST00000397428 USHBP1Q8N6Y0 703 aa16.69■□□□□ 0.26
SYNE4-203ENST00000397428 DOT1LQ8TEK3 1739 aa16.69■□□□□ 0.26
SYNE4-203ENST00000397428 KIF24Q5T7B8 1368 aa16.68■□□□□ 0.26
SYNE4-203ENST00000397428 TATP17735 454 aaPredicted RBP16.68■□□□□ 0.26
SYNE4-203ENST00000397428 USP47Q96K76 1375 aa16.67■□□□□ 0.26
SYNE4-203ENST00000397428 HMGB2P26583 209 aaKnown RBP16.67■□□□□ 0.26
SYNE4-203ENST00000397428 TUBGCP6Q96RT7 1819 aa16.66■□□□□ 0.26
SYNE4-203ENST00000397428 CYP27B1O15528 508 aa16.65■□□□□ 0.26
SYNE4-203ENST00000397428 NLGN2Q8NFZ4 835 aa16.65■□□□□ 0.26
SYNE4-203ENST00000397428 FLT4P35916 1363 aa16.64■□□□□ 0.26
SYNE4-203ENST00000397428 SMG6Q86US8 1419 aaKnown RBP16.64■□□□□ 0.25
SYNE4-203ENST00000397428 NKX1-1Q15270 411 aaPredicted RBP16.64■□□□□ 0.25
SYNE4-203ENST00000397428 PCDH11XQ9BZA7 1347 aa16.64■□□□□ 0.25
SYNE4-203ENST00000397428 PCDH11YQ9BZA8 1340 aa16.64■□□□□ 0.25
SYNE4-203ENST00000397428 TRIM26Q12899 539 aaPredicted RBP16.63■□□□□ 0.25
SYNE4-203ENST00000397428 KLHL34Q8N239 644 aa16.63■□□□□ 0.25
SYNE4-203ENST00000397428 MSH5O43196 834 aa16.62■□□□□ 0.25
SYNE4-203ENST00000397428 C1QTNF8P60827 252 aa16.62■□□□□ 0.25
SYNE4-203ENST00000397428 MPRIPQ6WCQ1 1025 aa16.62■□□□□ 0.25
SYNE4-203ENST00000397428 FLAD1Q8NFF5 587 aa16.62■□□□□ 0.25
SYNE4-203ENST00000397428 TIMELESSQ9UNS1 1208 aa16.62■□□□□ 0.25
SYNE4-203ENST00000397428 UTRNP46939 3433 aa16.61■□□□□ 0.25
SYNE4-203ENST00000397428 EMILIN1Q9Y6C2 1016 aa16.61■□□□□ 0.25
SYNE4-203ENST00000397428 WASHC2AQ641Q2 1341 aa16.61■□□□□ 0.25
SYNE4-203ENST00000397428 GRIN3BO60391 1043 aa16.6■□□□□ 0.25
SYNE4-203ENST00000397428 YBX3P16989 372 aaKnown RBP eCLIP16.6■□□□□ 0.25
SYNE4-203ENST00000397428 SMARCC1Q92922 1105 aaPredicted RBP16.6■□□□□ 0.25
SYNE4-203ENST00000397428 NCAPD2Q15021 1401 aa16.6■□□□□ 0.25
SYNE4-203ENST00000397428 KIF20BQ96Q89 1820 aa16.59■□□□□ 0.25
SYNE4-203ENST00000397428 PIGBQ92521 554 aa16.59■□□□□ 0.25
SYNE4-203ENST00000397428 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.59■□□□□ 0.25
SYNE4-203ENST00000397428 CD2APQ9Y5K6 639 aa16.59■□□□□ 0.25
SYNE4-203ENST00000397428 PALLDQ8WX93 1383 aa16.59■□□□□ 0.25
SYNE4-203ENST00000397428 PELP1Q8IZL8 1130 aaKnown RBP16.58■□□□□ 0.24
SYNE4-203ENST00000397428 EYA1Q99502 592 aa16.58■□□□□ 0.24
SYNE4-203ENST00000397428 SPG7Q9UQ90 795 aa16.58■□□□□ 0.24
SYNE4-203ENST00000397428 TAF1LQ8IZX4 1826 aa16.57■□□□□ 0.24
SYNE4-203ENST00000397428 C5P01031 1676 aa16.57■□□□□ 0.24
SYNE4-203ENST00000397428 MSL1Q68DK7 614 aa16.57■□□□□ 0.24
SYNE4-203ENST00000397428 POLKQ9UBT6 870 aa16.57■□□□□ 0.24
SYNE4-203ENST00000397428 ITGB4P16144 1822 aa16.56■□□□□ 0.24
SYNE4-203ENST00000397428 NSD3Q9BZ95 1437 aa16.56■□□□□ 0.24
SYNE4-203ENST00000397428 PPM1GO15355 546 aaPredicted RBP16.56■□□□□ 0.24
SYNE4-203ENST00000397428 AMIGO3Q86WK7 504 aa16.56■□□□□ 0.24
SYNE4-203ENST00000397428 PKD1L3Q7Z443 1732 aa16.55■□□□□ 0.24
SYNE4-203ENST00000397428 TOGARAM1Q9Y4F4 1720 aa16.54■□□□□ 0.24
SYNE4-203ENST00000397428 GOLGB1Q14789 3259 aaKnown RBP16.54■□□□□ 0.24
SYNE4-203ENST00000397428 C4BP0C0L5 1744 aa16.53■□□□□ 0.24
SYNE4-203ENST00000397428 LOC102724428A0A0B4J2F2 783 aa16.53■□□□□ 0.24
SYNE4-203ENST00000397428 SIK1P57059 783 aa16.53■□□□□ 0.24
SYNE4-203ENST00000397428 AK7Q96M32 723 aa16.53■□□□□ 0.24
SYNE4-203ENST00000397428 MAP2P11137 1827 aaKnown RBP16.53■□□□□ 0.24
SYNE4-203ENST00000397428 SENP3-EIF4A1A0A087X0R7 540 aa16.52■□□□□ 0.24
SYNE4-203ENST00000397428 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.52■□□□□ 0.24
SYNE4-203ENST00000397428 PHKG2P15735 406 aa16.52■□□□□ 0.24
SYNE4-203ENST00000397428 SMIM5Q71RC9 77 aa16.52■□□□□ 0.24
SYNE4-203ENST00000397428 IFNL2Q8IZJ0 200 aa16.52■□□□□ 0.24
SYNE4-203ENST00000397428 ASAP1Q9ULH1 1129 aa16.52■□□□□ 0.24
SYNE4-203ENST00000397428 ANKRD26Q9UPS8 1709 aa16.52■□□□□ 0.24
SYNE4-203ENST00000397428 GIGYF1O75420 1035 aaPredicted RBP16.51■□□□□ 0.23
SYNE4-203ENST00000397428 LINC00116Q8NCU8 138 aa16.51■□□□□ 0.23
SYNE4-203ENST00000397428 TMOD3Q9NYL9 352 aa16.51■□□□□ 0.23
SYNE4-203ENST00000397428 SSFA2P28290 1259 aa16.5■□□□□ 0.23
SYNE4-203ENST00000397428 ITPK1Q13572 414 aa16.5■□□□□ 0.23
SYNE4-203ENST00000397428 ATG3Q9NT62 314 aa16.5■□□□□ 0.23
SYNE4-203ENST00000397428 UBR3Q6ZT12 1888 aa16.5■□□□□ 0.23
SYNE4-203ENST00000397428 EIF4A2Q14240 407 aaKnown RBP16.49■□□□□ 0.23
SYNE4-203ENST00000397428 CLSPNQ9HAW4 1339 aa16.48■□□□□ 0.23
SYNE4-203ENST00000397428 ATP6V1AP38606 617 aa16.48■□□□□ 0.23
SYNE4-203ENST00000397428 PLEKHG2Q9H7P9 1386 aa16.48■□□□□ 0.23
SYNE4-203ENST00000397428 ERVV-2B6SEH9 535 aa16.47■□□□□ 0.23
SYNE4-203ENST00000397428 PHF14O94880 888 aa16.47■□□□□ 0.23
SYNE4-203ENST00000397428 TNNT2P45379 298 aaPredicted RBP16.45■□□□□ 0.22
SYNE4-203ENST00000397428 SLC4A9Q96Q91 983 aa16.45■□□□□ 0.22
SYNE4-203ENST00000397428 IGSF1Q8N6C5 1336 aa16.45■□□□□ 0.22
SYNE4-203ENST00000397428 GNPATO15228 680 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms