RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 STK32BQ9NY57 414 aa12.46□□□□□ -0.41
CAPN3-208ENST00000397204 SLC15A2Q16348 729 aa12.45□□□□□ -0.42
CAPN3-208ENST00000397204 DCBLD2Q96PD2 775 aa12.45□□□□□ -0.42
CAPN3-208ENST00000397204 NUP188Q5SRE5 1749 aa12.45□□□□□ -0.42
CAPN3-208ENST00000397204 PEAK1Q9H792 1746 aa12.45□□□□□ -0.42
CAPN3-208ENST00000397204 UTRNP46939 3433 aa12.44□□□□□ -0.42
CAPN3-208ENST00000397204 USP31Q70CQ4 1352 aa12.44□□□□□ -0.42
CAPN3-208ENST00000397204 COL18A1P39060 1754 aa12.44□□□□□ -0.42
CAPN3-208ENST00000397204 ZBTB7AO95365 584 aa12.44□□□□□ -0.42
CAPN3-208ENST00000397204 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.44□□□□□ -0.42
CAPN3-208ENST00000397204 PDGFDQ9GZP0 370 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-208ENST00000397204 NLRP2Q9NX02 1062 aa12.44□□□□□ -0.42
CAPN3-208ENST00000397204 QRICH2Q9H0J4 1663 aa12.44□□□□□ -0.42
CAPN3-208ENST00000397204 POTEIP0CG38 1075 aa12.43□□□□□ -0.42
CAPN3-208ENST00000397204 PTGER2P43116 358 aa12.43□□□□□ -0.42
CAPN3-208ENST00000397204 HDGFL2Q7Z4V5 671 aaPredicted RBP12.43□□□□□ -0.42
CAPN3-208ENST00000397204 PUS7Q96PZ0 661 aaKnown RBP12.43□□□□□ -0.42
CAPN3-208ENST00000397204 SBNO2Q9Y2G9 1366 aa12.43□□□□□ -0.42
CAPN3-208ENST00000397204 PIK3C2AO00443 1686 aa12.42□□□□□ -0.42
CAPN3-208ENST00000397204 IL2RBP14784 551 aa12.42□□□□□ -0.42
CAPN3-208ENST00000397204 TMC1Q8TDI8 760 aa12.42□□□□□ -0.42
CAPN3-208ENST00000397204 CARD11Q9BXL7 1154 aa12.42□□□□□ -0.42
CAPN3-208ENST00000397204 MTFR1LQ9H019 292 aa12.42□□□□□ -0.42
CAPN3-208ENST00000397204 TERF2IPQ9NYB0 399 aa12.42□□□□□ -0.42
CAPN3-208ENST00000397204 PCDHB13Q9Y5F0 798 aa12.42□□□□□ -0.42
CAPN3-208ENST00000397204 ERBB3P21860 1342 aa12.41□□□□□ -0.42
CAPN3-208ENST00000397204 TRPM1Q7Z4N2 1603 aa12.41□□□□□ -0.42
CAPN3-208ENST00000397204 NME9Q86XW9 330 aa12.41□□□□□ -0.42
CAPN3-208ENST00000397204 SYT17Q9BSW7 474 aa12.41□□□□□ -0.42
CAPN3-208ENST00000397204 SLC12A5Q9H2X9 1139 aa12.41□□□□□ -0.42
CAPN3-208ENST00000397204 LRRC37A3O60309 1634 aa12.4□□□□□ -0.42
CAPN3-208ENST00000397204 ANKRD24Q8TF21 1146 aa12.4□□□□□ -0.42
CAPN3-208ENST00000397204 ACSBG1Q96GR2 724 aa12.4□□□□□ -0.42
CAPN3-208ENST00000397204 RGPD3A6NKT7 1758 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-208ENST00000397204 RGPD4Q7Z3J3 1758 aa12.4□□□□□ -0.42
CAPN3-208ENST00000397204 SBF2Q86WG5 1849 aa12.39□□□□□ -0.43
CAPN3-208ENST00000397204 NFAT5O94916 1531 aa12.39□□□□□ -0.43
CAPN3-208ENST00000397204 ABCC6O95255 1503 aa12.39□□□□□ -0.43
CAPN3-208ENST00000397204 SLC24A1O60721 1099 aa12.39□□□□□ -0.43
CAPN3-208ENST00000397204 IP6K1Q92551 441 aa12.39□□□□□ -0.43
CAPN3-208ENST00000397204 SGIP1Q9BQI5 828 aa12.39□□□□□ -0.43
CAPN3-208ENST00000397204 TNS2Q63HR2 1409 aa12.38□□□□□ -0.43
CAPN3-208ENST00000397204 IFNL1Q8IU54 200 aa12.38□□□□□ -0.43
CAPN3-208ENST00000397204 FHDC1Q9C0D6 1143 aaPredicted RBP12.38□□□□□ -0.43
CAPN3-208ENST00000397204 TRPC6Q9Y210 931 aa12.38□□□□□ -0.43
CAPN3-208ENST00000397204 ARXQ96QS3 562 aa12.37□□□□□ -0.43
CAPN3-208ENST00000397204 EDC4Q6P2E9 1401 aaKnown RBP12.37□□□□□ -0.43
CAPN3-208ENST00000397204 SLC27A3Q5K4L6 730 aa12.36□□□□□ -0.43
CAPN3-208ENST00000397204 SLC16A10Q8TF71 515 aa12.36□□□□□ -0.43
CAPN3-208ENST00000397204 CD163L1Q9NR16 1453 aa12.35□□□□□ -0.43
CAPN3-208ENST00000397204 DDX54Q8TDD1 881 aaKnown RBP12.35□□□□□ -0.43
CAPN3-208ENST00000397204 LRRC4BQ9NT99 713 aa12.35□□□□□ -0.43
CAPN3-208ENST00000397204 AKAP12Q02952 1782 aa12.35□□□□□ -0.43
CAPN3-208ENST00000397204 CASZ1Q86V15 1759 aa12.34□□□□□ -0.43
CAPN3-208ENST00000397204 COG3Q96JB2 828 aa12.34□□□□□ -0.43
CAPN3-208ENST00000397204 RGPD5Q99666 1765 aa12.33□□□□□ -0.44
CAPN3-208ENST00000397204 CHRM1P11229 460 aaPredicted RBP12.33□□□□□ -0.44
CAPN3-208ENST00000397204 ZNF784Q8NCA9 323 aaPredicted RBP12.33□□□□□ -0.44
CAPN3-208ENST00000397204 GOLGB1Q14789 3259 aaKnown RBP12.33□□□□□ -0.44
CAPN3-208ENST00000397204 A0A1W2PP64 1363 aa12.32□□□□□ -0.44
CAPN3-208ENST00000397204 MAP3K5Q99683 1374 aa12.32□□□□□ -0.44
CAPN3-208ENST00000397204 PRIM1P49642 420 aaKnown RBP12.32□□□□□ -0.44
CAPN3-208ENST00000397204 ZNF827Q17R98 1081 aa12.32□□□□□ -0.44
CAPN3-208ENST00000397204 ZCRB1Q8TBF4 217 aaKnown RBP12.32□□□□□ -0.44
CAPN3-208ENST00000397204 LTV1Q96GA3 475 aaPredicted RBP12.32□□□□□ -0.44
CAPN3-208ENST00000397204 TESK2Q96S53 571 aa12.32□□□□□ -0.44
CAPN3-208ENST00000397204 PCDHB8Q9UN66 801 aa12.32□□□□□ -0.44
CAPN3-208ENST00000397204 POLD1P28340 1107 aa12.31□□□□□ -0.44
CAPN3-208ENST00000397204 HOXC9P31274 260 aa12.31□□□□□ -0.44
CAPN3-208ENST00000397204 AMPHP49418 695 aa12.31□□□□□ -0.44
CAPN3-208ENST00000397204 TFCP2L1Q9NZI6 479 aa12.31□□□□□ -0.44
CAPN3-208ENST00000397204 TONSLQ96HA7 1378 aa12.3□□□□□ -0.44
CAPN3-208ENST00000397204 WNK3Q9BYP7 1800 aa12.3□□□□□ -0.44
CAPN3-208ENST00000397204 KAT6BQ8WYB5 2073 aa12.3□□□□□ -0.44
CAPN3-208ENST00000397204 ST20-MTHFSA0A0A6YYL1 179 aa12.3□□□□□ -0.44
CAPN3-208ENST00000397204 ATMINO43313 823 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-208ENST00000397204 HMGB2P26583 209 aaKnown RBP12.3□□□□□ -0.44
CAPN3-208ENST00000397204 ASTLQ6HA08 431 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-208ENST00000397204 SYTL4Q96C24 671 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-208ENST00000397204 BMP2KQ9NSY1 1161 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-208ENST00000397204 MON2Q7Z3U7 1717 aa12.3□□□□□ -0.44
CAPN3-208ENST00000397204 MAP3K19Q56UN5 1328 aa12.3□□□□□ -0.44
CAPN3-208ENST00000397204 GPR162Q16538 588 aa12.29□□□□□ -0.44
CAPN3-208ENST00000397204 NHSQ6T4R5 1651 aa12.29□□□□□ -0.44
CAPN3-208ENST00000397204 USP54Q70EL1 1684 aa12.29□□□□□ -0.44
CAPN3-208ENST00000397204 TIE1P35590 1138 aa12.28□□□□□ -0.44
CAPN3-208ENST00000397204 PELP1Q8IZL8 1130 aaKnown RBP12.28□□□□□ -0.44
CAPN3-208ENST00000397204 CGNL1Q0VF96 1302 aa12.28□□□□□ -0.44
CAPN3-208ENST00000397204 ANKRD36BQ8N2N9 1353 aa12.28□□□□□ -0.44
CAPN3-208ENST00000397204 FYB1O15117 783 aa12.27□□□□□ -0.45
CAPN3-208ENST00000397204 FBLN1P23142 703 aa12.27□□□□□ -0.45
CAPN3-208ENST00000397204 ATN1P54259 1190 aaPredicted RBP12.27□□□□□ -0.45
CAPN3-208ENST00000397204 PNPLA7Q6ZV29 1317 aa12.27□□□□□ -0.45
CAPN3-208ENST00000397204 MYOM1P52179 1685 aa12.26□□□□□ -0.45
CAPN3-208ENST00000397204 KCNQ4P56696 695 aa12.26□□□□□ -0.45
CAPN3-208ENST00000397204 NBPF6Q5VWK0 638 aa12.26□□□□□ -0.45
CAPN3-208ENST00000397204 ZNF467Q7Z7K2 595 aaPredicted RBP12.26□□□□□ -0.45
CAPN3-208ENST00000397204 RAPGEF4Q8WZA2 1011 aa12.26□□□□□ -0.45
CAPN3-208ENST00000397204 NBPF4Q96M43 638 aa12.26□□□□□ -0.45
CAPN3-208ENST00000397204 TTLL13PA6NNM8 815 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms