RNA–Protein interactions for RNA: ENST00000397012.6

PPARG-206, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPARG, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-206ENST00000397012 MCM10Q7L590 875 aa17.26■□□□□ 0.35
PPARG-206ENST00000397012 LAS1LQ9Y4W2 734 aaKnown RBP17.26■□□□□ 0.35
PPARG-206ENST00000397012 KIAA0232Q92628 1395 aa17.25■□□□□ 0.35
PPARG-206ENST00000397012 RTF1Q92541 710 aaKnown RBP17.25■□□□□ 0.35
PPARG-206ENST00000397012 CRBNQ96SW2 442 aa17.25■□□□□ 0.35
PPARG-206ENST00000397012 GNAT3A8MTJ3 354 aa17.25■□□□□ 0.35
PPARG-206ENST00000397012 B4GALNT3Q6L9W6 998 aa17.25■□□□□ 0.35
PPARG-206ENST00000397012 MAP3K5Q99683 1374 aa17.24■□□□□ 0.35
PPARG-206ENST00000397012 ALDH1L2Q3SY69 923 aa17.23■□□□□ 0.35
PPARG-206ENST00000397012 VAMP4O75379 141 aa17.23■□□□□ 0.35
PPARG-206ENST00000397012 PLEKHG2Q9H7P9 1386 aa17.22■□□□□ 0.35
PPARG-206ENST00000397012 BRPF1P55201 1214 aaPredicted RBP17.22■□□□□ 0.35
PPARG-206ENST00000397012 AMOTQ4VCS5 1084 aa17.22■□□□□ 0.35
PPARG-206ENST00000397012 SSH1Q8WYL5 1049 aa17.22■□□□□ 0.35
PPARG-206ENST00000397012 CHRNA2Q15822 529 aa17.21■□□□□ 0.35
PPARG-206ENST00000397012 PLEKHO1Q53GL0 409 aaPredicted RBP17.21■□□□□ 0.35
PPARG-206ENST00000397012 PELP1Q8IZL8 1130 aaKnown RBP17.21■□□□□ 0.35
PPARG-206ENST00000397012 IL17REQ8NFR9 667 aa17.21■□□□□ 0.35
PPARG-206ENST00000397012 CCDC136Q96JN2 1154 aa17.21■□□□□ 0.35
PPARG-206ENST00000397012 BCL2L13Q9BXK5 485 aa17.2■□□□□ 0.34
PPARG-206ENST00000397012 CEMIPQ8WUJ3 1361 aa17.2■□□□□ 0.34
PPARG-206ENST00000397012 COL22A1Q8NFW1 1626 aaPredicted RBP17.2■□□□□ 0.34
PPARG-206ENST00000397012 TSPYL6Q8N831 410 aa17.2■□□□□ 0.34
PPARG-206ENST00000397012 SMC4Q9NTJ3 1288 aa17.2■□□□□ 0.34
PPARG-206ENST00000397012 VIRMAQ69YN4 1812 aaKnown RBP17.19■□□□□ 0.34
PPARG-206ENST00000397012 TWISTNBQ3B726 338 aaPredicted RBP17.19■□□□□ 0.34
PPARG-206ENST00000397012 C8orf58Q8NAV2 365 aa17.19■□□□□ 0.34
PPARG-206ENST00000397012 FRAT1Q92837 279 aaPredicted RBP17.19■□□□□ 0.34
PPARG-206ENST00000397012 BABAM1Q9NWV8 329 aa17.19■□□□□ 0.34
PPARG-206ENST00000397012 AKAP4Q5JQC9 854 aa17.18■□□□□ 0.34
PPARG-206ENST00000397012 CANXP27824 592 aaKnown RBP17.18■□□□□ 0.34
PPARG-206ENST00000397012 PRDM11Q9NQV5 511 aa17.18■□□□□ 0.34
PPARG-206ENST00000397012 ADAMTS7Q9UKP4 1686 aa17.17■□□□□ 0.34
PPARG-206ENST00000397012 ZKSCAN2Q63HK3 967 aa17.17■□□□□ 0.34
PPARG-206ENST00000397012 NLRP2Q9NX02 1062 aa17.17■□□□□ 0.34
PPARG-206ENST00000397012 KIF16BQ96L93 1317 aa17.16■□□□□ 0.34
PPARG-206ENST00000397012 COL5A2P05997 1499 aaPredicted RBP17.16■□□□□ 0.34
PPARG-206ENST00000397012 OVOS2A0A0G2JMS6 1433 aa17.16■□□□□ 0.34
PPARG-206ENST00000397012 HAP1P54257 671 aaPredicted RBP17.16■□□□□ 0.34
PPARG-206ENST00000397012 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.16■□□□□ 0.348e-10■□□□□ 8.2
PPARG-206ENST00000397012 WDR17Q8IZU2 1322 aa17.15■□□□□ 0.34
PPARG-206ENST00000397012 MS4A1P11836 297 aa17.15■□□□□ 0.34
PPARG-206ENST00000397012 ZNF530Q6P9A1 599 aaPredicted RBP17.15■□□□□ 0.34
PPARG-206ENST00000397012 PANK1Q8TE04 598 aa17.15■□□□□ 0.34
PPARG-206ENST00000397012 PKD1L3Q7Z443 1732 aa17.15■□□□□ 0.34
PPARG-206ENST00000397012 CSB-PGBD3P0DP91 1061 aa17.14■□□□□ 0.34
PPARG-206ENST00000397012 TAF7Q15545 349 aaPredicted RBP17.14■□□□□ 0.34
PPARG-206ENST00000397012 MRPL50Q8N5N7 158 aaKnown RBP17.14■□□□□ 0.34
PPARG-206ENST00000397012 RAPGEF4Q8WZA2 1011 aa17.14■□□□□ 0.34
PPARG-206ENST00000397012 TSPYL4Q9UJ04 414 aa17.14■□□□□ 0.34
PPARG-206ENST00000397012 COL16A1Q07092 1604 aaPredicted RBP17.14■□□□□ 0.33
PPARG-206ENST00000397012 MEGF6O75095 1541 aa17.14■□□□□ 0.33
PPARG-206ENST00000397012 PHLPP1O60346 1717 aa17.14■□□□□ 0.33
PPARG-206ENST00000397012 ELL2O00472 640 aaPredicted RBP17.14■□□□□ 0.33
PPARG-206ENST00000397012 RLBP1P12271 317 aa17.14■□□□□ 0.33
PPARG-206ENST00000397012 ATF7IPQ6VMQ6 1270 aa17.14■□□□□ 0.33
PPARG-206ENST00000397012 NOB1Q9ULX3 412 aaKnown RBP17.14■□□□□ 0.33
PPARG-206ENST00000397012 IPO8O15397 1037 aaKnown RBP17.13■□□□□ 0.33
PPARG-206ENST00000397012 AAMPQ13685 434 aa17.13■□□□□ 0.33
PPARG-206ENST00000397012 TNNQ9UQP3 1299 aa17.13■□□□□ 0.33
PPARG-206ENST00000397012 KDM3BQ7LBC6 1761 aa17.13■□□□□ 0.33
PPARG-206ENST00000397012 TOM1O60784 492 aa17.13■□□□□ 0.33
PPARG-206ENST00000397012 TRIM27P14373 513 aa17.13■□□□□ 0.33
PPARG-206ENST00000397012 TATP17735 454 aaPredicted RBP17.13■□□□□ 0.33
PPARG-206ENST00000397012 ARHGAP45Q92619 1136 aa17.13■□□□□ 0.33
PPARG-206ENST00000397012 MIS18AQ9NYP9 233 aa17.13■□□□□ 0.33
PPARG-206ENST00000397012 COG6Q9Y2V7 657 aa17.13■□□□□ 0.33
PPARG-206ENST00000397012 SIPA1L3O60292 1781 aaPredicted RBP17.12■□□□□ 0.33
PPARG-206ENST00000397012 C1orf141Q5JVX7 400 aa17.12■□□□□ 0.33
PPARG-206ENST00000397012 DZIP1LQ8IYY4 767 aaKnown RBP17.12■□□□□ 0.33
PPARG-206ENST00000397012 LGR6Q9HBX8 967 aa17.12■□□□□ 0.33
PPARG-206ENST00000397012 KRT24Q2M2I5 525 aa17.11■□□□□ 0.33
PPARG-206ENST00000397012 SOS1Q07889 1333 aaPredicted RBP17.11■□□□□ 0.33
PPARG-206ENST00000397012 COL14A1Q05707 1796 aaKnown RBP17.11■□□□□ 0.33
PPARG-206ENST00000397012 SCN11AQ9UI33 1791 aa17.11■□□□□ 0.33
PPARG-206ENST00000397012 PARP4Q9UKK3 1724 aaKnown RBP17.11■□□□□ 0.33
PPARG-206ENST00000397012 RNMTO43148 476 aaKnown RBP17.11■□□□□ 0.33
PPARG-206ENST00000397012 SPG7Q9UQ90 795 aa17.1■□□□□ 0.33
PPARG-206ENST00000397012 MVPQ14764 893 aaKnown RBP17.09■□□□□ 0.33
PPARG-206ENST00000397012 CLUAP1Q96AJ1 413 aa17.09■□□□□ 0.33
PPARG-206ENST00000397012 MPRIPQ6WCQ1 1025 aa17.09■□□□□ 0.33
PPARG-206ENST00000397012 CARD10Q9BWT7 1032 aa17.09■□□□□ 0.33
PPARG-206ENST00000397012 CACNA1FO60840 1977 aa17.08■□□□□ 0.33
PPARG-206ENST00000397012 FTSJ3Q8IY81 847 aaKnown RBP17.08■□□□□ 0.33
PPARG-206ENST00000397012 TOM1L2Q6ZVM7 507 aa17.08■□□□□ 0.32
PPARG-206ENST00000397012 PHKG2P15735 406 aa17.07■□□□□ 0.32
PPARG-206ENST00000397012 TEFQ10587 303 aa17.07■□□□□ 0.32
PPARG-206ENST00000397012 KDM2BQ8NHM5 1336 aa17.07■□□□□ 0.32
PPARG-206ENST00000397012 IFNL2Q8IZJ0 200 aa17.06■□□□□ 0.32
PPARG-206ENST00000397012 KDM6AO15550 1401 aaPredicted RBP17.05■□□□□ 0.32
PPARG-206ENST00000397012 TCERG1O14776 1098 aaKnown RBP17.04■□□□□ 0.32
PPARG-206ENST00000397012 EVA1CP58658 441 aa17.04■□□□□ 0.32
PPARG-206ENST00000397012 LARP1Q6PKG0 1096 aaKnown RBP17.04■□□□□ 0.32
PPARG-206ENST00000397012 DDX19BQ9UMR2 479 aa17.04■□□□□ 0.32
PPARG-206ENST00000397012 CYP27B1O15528 508 aa17.04■□□□□ 0.32
PPARG-206ENST00000397012 EIF4A1P60842 406 aaKnown RBP17.04■□□□□ 0.32
PPARG-206ENST00000397012 TMEM57Q8N5G2 664 aa17.04■□□□□ 0.32
PPARG-206ENST00000397012 ABCC4O15439 1325 aa17.04■□□□□ 0.32
PPARG-206ENST00000397012 MRC1P22897 1456 aa17.04■□□□□ 0.32
PPARG-206ENST00000397012 SHANK3Q9BYB0 1731 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms