RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 SLAIN2Q9P270 581 aa21.97■■□□□ 1.11
SCNN1A-205ENST00000396966 CRYBG1Q9Y4K1 1723 aa21.97■■□□□ 1.11
SCNN1A-205ENST00000396966 SPATA31A3Q5VYP0 1347 aa21.96■■□□□ 1.11
SCNN1A-205ENST00000396966 KDM2BQ8NHM5 1336 aa21.96■■□□□ 1.11
SCNN1A-205ENST00000396966 NBPF6Q5VWK0 638 aa21.96■■□□□ 1.11
SCNN1A-205ENST00000396966 NPM2Q86SE8 214 aaKnown RBP21.96■■□□□ 1.11
SCNN1A-205ENST00000396966 USHBP1Q8N6Y0 703 aa21.96■■□□□ 1.11
SCNN1A-205ENST00000396966 NBPF4Q96M43 638 aa21.96■■□□□ 1.11
SCNN1A-205ENST00000396966 KIF16BQ96L93 1317 aa21.96■■□□□ 1.11
SCNN1A-205ENST00000396966 COG6Q9Y2V7 657 aa21.95■■□□□ 1.1
SCNN1A-205ENST00000396966 CAMTA1Q9Y6Y1 1673 aa21.95■■□□□ 1.1
SCNN1A-205ENST00000396966 VAMP4O75379 141 aa21.95■■□□□ 1.1
SCNN1A-205ENST00000396966 GNAT3A8MTJ3 354 aa21.94■■□□□ 1.1
SCNN1A-205ENST00000396966 AAMPQ13685 434 aa21.94■■□□□ 1.1
SCNN1A-205ENST00000396966 ANKRD24Q8TF21 1146 aa21.94■■□□□ 1.1
SCNN1A-205ENST00000396966 BACH2Q9BYV9 841 aa21.94■■□□□ 1.1
SCNN1A-205ENST00000396966 LRRC37A3O60309 1634 aa21.94■■□□□ 1.1
SCNN1A-205ENST00000396966 CRB1P82279 1406 aa21.94■■□□□ 1.1
SCNN1A-205ENST00000396966 CHL1O00533 1208 aa21.94■■□□□ 1.1
SCNN1A-205ENST00000396966 IPO8O15397 1037 aaKnown RBP21.94■■□□□ 1.1
SCNN1A-205ENST00000396966 ZC3H6P61129 1189 aaKnown RBP21.94■■□□□ 1.1
SCNN1A-205ENST00000396966 TWISTNBQ3B726 338 aaPredicted RBP21.94■■□□□ 1.1
SCNN1A-205ENST00000396966 FTSJ3Q8IY81 847 aaKnown RBP21.93■■□□□ 1.1
SCNN1A-205ENST00000396966 HAP1P54257 671 aaPredicted RBP21.92■■□□□ 1.1
SCNN1A-205ENST00000396966 DZIP1LQ8IYY4 767 aaKnown RBP21.92■■□□□ 1.1
SCNN1A-205ENST00000396966 MAP3K5Q99683 1374 aa21.92■■□□□ 1.1
SCNN1A-205ENST00000396966 COL18A1P39060 1754 aa21.92■■□□□ 1.1
SCNN1A-205ENST00000396966 BRPF1P55201 1214 aaPredicted RBP21.91■■□□□ 1.1
SCNN1A-205ENST00000396966 TSPYL6Q8N831 410 aa21.91■■□□□ 1.1
SCNN1A-205ENST00000396966 LRRC59Q96AG4 307 aaKnown RBP21.91■■□□□ 1.1
SCNN1A-205ENST00000396966 NOB1Q9ULX3 412 aaKnown RBP21.91■■□□□ 1.1
SCNN1A-205ENST00000396966 ABCC6O95255 1503 aa21.91■■□□□ 1.1
SCNN1A-205ENST00000396966 NCAPD2Q15021 1401 aa21.91■■□□□ 1.1
SCNN1A-205ENST00000396966 ATF7IPQ6VMQ6 1270 aa21.91■■□□□ 1.1
SCNN1A-205ENST00000396966 CLUAP1Q96AJ1 413 aa21.91■■□□□ 1.1
SCNN1A-205ENST00000396966 ZBTB47Q9UFB7 747 aaPredicted RBP21.91■■□□□ 1.1
SCNN1A-205ENST00000396966 FAM208AQ9UK61 1670 aaKnown RBP21.91■■□□□ 1.1
SCNN1A-205ENST00000396966 CENPQQ7L2Z9 268 aaPredicted RBP21.9■■□□□ 1.1
SCNN1A-205ENST00000396966 ELL2O00472 640 aaPredicted RBP21.9■■□□□ 1.1
SCNN1A-205ENST00000396966 RLBP1P12271 317 aa21.9■■□□□ 1.1
SCNN1A-205ENST00000396966 C8orf58Q8NAV2 365 aa21.9■■□□□ 1.1
SCNN1A-205ENST00000396966 TNNQ9UQP3 1299 aa21.9■■□□□ 1.1
SCNN1A-205ENST00000396966 AXIN2Q9Y2T1 843 aa21.9■■□□□ 1.1
SCNN1A-205ENST00000396966 NHSL1Q5SYE7 1610 aa21.89■■□□□ 1.1
SCNN1A-205ENST00000396966 VIRMAQ69YN4 1812 aaKnown RBP21.89■■□□□ 1.1
SCNN1A-205ENST00000396966 KIAA0232Q92628 1395 aa21.89■■□□□ 1.09
SCNN1A-205ENST00000396966 LMO7Q8WWI1 1683 aa21.89■■□□□ 1.09
SCNN1A-205ENST00000396966 SOS2Q07890 1332 aaPredicted RBP21.88■■□□□ 1.09
SCNN1A-205ENST00000396966 TRIM27P14373 513 aa21.88■■□□□ 1.09
SCNN1A-205ENST00000396966 MVPQ14764 893 aaKnown RBP21.88■■□□□ 1.09
SCNN1A-205ENST00000396966 CABLES1Q8TDN4 633 aa21.88■■□□□ 1.09
SCNN1A-205ENST00000396966 ERBB3P21860 1342 aa21.87■■□□□ 1.09
SCNN1A-205ENST00000396966 TSPYL4Q9UJ04 414 aa21.87■■□□□ 1.09
SCNN1A-205ENST00000396966 PLEKHO1Q53GL0 409 aaPredicted RBP21.86■■□□□ 1.09
SCNN1A-205ENST00000396966 MRPL50Q8N5N7 158 aaKnown RBP21.86■■□□□ 1.09
SCNN1A-205ENST00000396966 AMOTQ4VCS5 1084 aa21.86■■□□□ 1.09
SCNN1A-205ENST00000396966 ARHGAP45Q92619 1136 aa21.84■■□□□ 1.09
SCNN1A-205ENST00000396966 CPDO75976 1380 aa21.84■■□□□ 1.09
SCNN1A-205ENST00000396966 IL17REQ8NFR9 667 aa21.83■■□□□ 1.09
SCNN1A-205ENST00000396966 BABAM1Q9NWV8 329 aa21.83■■□□□ 1.09
SCNN1A-205ENST00000396966 ABCA3Q99758 1704 aa21.83■■□□□ 1.09
SCNN1A-205ENST00000396966 NBR1Q14596 966 aa21.83■■□□□ 1.08
SCNN1A-205ENST00000396966 DDX19BQ9UMR2 479 aa21.83■■□□□ 1.08
SCNN1A-205ENST00000396966 MIS18AQ9NYP9 233 aa21.82■■□□□ 1.08
SCNN1A-205ENST00000396966 AKAP4Q5JQC9 854 aa21.81■■□□□ 1.08
SCNN1A-205ENST00000396966 TAF7Q15545 349 aaPredicted RBP21.81■■□□□ 1.08
SCNN1A-205ENST00000396966 ZNF530Q6P9A1 599 aaPredicted RBP21.81■■□□□ 1.08
SCNN1A-205ENST00000396966 ITPRIPQ8IWB1 547 aa21.81■■□□□ 1.08
SCNN1A-205ENST00000396966 CSB-PGBD3P0DP91 1061 aa21.79■■□□□ 1.08
SCNN1A-205ENST00000396966 CHRNA2Q15822 529 aa21.79■■□□□ 1.08
SCNN1A-205ENST00000396966 KRT24Q2M2I5 525 aa21.79■■□□□ 1.08
SCNN1A-205ENST00000396966 C1orf141Q5JVX7 400 aa21.79■■□□□ 1.08
SCNN1A-205ENST00000396966 NLRP2Q9NX02 1062 aa21.79■■□□□ 1.08
SCNN1A-205ENST00000396966 CEMIPQ8WUJ3 1361 aa21.79■■□□□ 1.08
SCNN1A-205ENST00000396966 TMEM57Q8N5G2 664 aa21.79■■□□□ 1.08
SCNN1A-205ENST00000396966 CACNA1FO60840 1977 aa21.79■■□□□ 1.08
SCNN1A-205ENST00000396966 KDM3BQ7LBC6 1761 aa21.77■■□□□ 1.08
SCNN1A-205ENST00000396966 RAPGEF4Q8WZA2 1011 aa21.77■■□□□ 1.08
SCNN1A-205ENST00000396966 API5Q9BZZ5 524 aaKnown RBP21.77■■□□□ 1.08
SCNN1A-205ENST00000396966 CHMP4BQ9H444 224 aaKnown RBP21.76■■□□□ 1.07
SCNN1A-205ENST00000396966 SOS1Q07889 1333 aaPredicted RBP21.76■■□□□ 1.07
SCNN1A-205ENST00000396966 IGHDP01880 384 aa21.75■■□□□ 1.07
SCNN1A-205ENST00000396966 RGS3P49796 1198 aa21.75■■□□□ 1.07
SCNN1A-205ENST00000396966 ROBO1Q9Y6N7 1651 aa21.75■■□□□ 1.07
SCNN1A-205ENST00000396966 OVOS2A0A0G2JMS6 1433 aa21.75■■□□□ 1.07
SCNN1A-205ENST00000396966 TATP17735 454 aaPredicted RBP21.74■■□□□ 1.07
SCNN1A-205ENST00000396966 PRDM11Q9NQV5 511 aa21.74■■□□□ 1.07
SCNN1A-205ENST00000396966 PLEKHG2Q9H7P9 1386 aa21.74■■□□□ 1.07
SCNN1A-205ENST00000396966 TEFQ10587 303 aa21.74■■□□□ 1.07
SCNN1A-205ENST00000396966 LGR6Q9HBX8 967 aa21.74■■□□□ 1.07
SCNN1A-205ENST00000396966 PCDHB15Q9Y5E8 787 aa21.74■■□□□ 1.07
SCNN1A-205ENST00000396966 LTBP4Q8N2S1 1624 aa21.74■■□□□ 1.07
SCNN1A-205ENST00000396966 RWDD1Q9H446 243 aaPredicted RBP21.73■■□□□ 1.07
SCNN1A-205ENST00000396966 ABCC4O15439 1325 aa21.73■■□□□ 1.07
SCNN1A-205ENST00000396966 ADAMTS7Q9UKP4 1686 aa21.72■■□□□ 1.07
SCNN1A-205ENST00000396966 SIPA1L3O60292 1781 aaPredicted RBP21.72■■□□□ 1.07
SCNN1A-205ENST00000396966 SCN11AQ9UI33 1791 aa21.72■■□□□ 1.07
SCNN1A-205ENST00000396966 MPRIPQ6WCQ1 1025 aa21.72■■□□□ 1.07
SCNN1A-205ENST00000396966 PTPRCP08575 1304 aa21.71■■□□□ 1.07
SCNN1A-205ENST00000396966 RNMTO43148 476 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms