RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 IL13P35225 146 aa29.45■■■□□ 2.3
CSNK1E-203ENST00000396832 AEBP1Q8IUX7 1158 aa29.44■■■□□ 2.3
CSNK1E-203ENST00000396832 PRPF40AO75400 957 aaKnown RBP29.44■■■□□ 2.3
CSNK1E-203ENST00000396832 ARHGAP45Q92619 1136 aa29.44■■■□□ 2.3
CSNK1E-203ENST00000396832 RBM27Q9P2N5 1060 aaKnown RBP29.44■■■□□ 2.3
CSNK1E-203ENST00000396832 KNDC1Q76NI1 1749 aa29.43■■■□□ 2.3
CSNK1E-203ENST00000396832 CSPP1Q1MSJ5 1256 aa29.43■■■□□ 2.3
CSNK1E-203ENST00000396832 TTC22Q5TAA0 569 aa29.43■■■□□ 2.3
CSNK1E-203ENST00000396832 BRPF1P55201 1214 aaPredicted RBP29.42■■■□□ 2.3
CSNK1E-203ENST00000396832 ZNF428Q96B54 188 aa29.42■■■□□ 2.3
CSNK1E-203ENST00000396832 CFAP44Q96MT7 982 aa29.42■■■□□ 2.3
CSNK1E-203ENST00000396832 ARID3AQ99856 593 aa29.41■■■□□ 2.3
CSNK1E-203ENST00000396832 CHMP4BQ9H444 224 aaKnown RBP29.41■■■□□ 2.3
CSNK1E-203ENST00000396832 GPT2Q8TD30 523 aa29.41■■■□□ 2.3
CSNK1E-203ENST00000396832 PIK3R4Q99570 1358 aa29.41■■■□□ 2.3
CSNK1E-203ENST00000396832 ARHGEF40Q8TER5 1519 aa29.41■■■□□ 2.3
CSNK1E-203ENST00000396832 RIMBP3CA6NJZ7 1639 aa29.41■■■□□ 2.3
CSNK1E-203ENST00000396832 RIMBP3BA6NNM3 1639 aa29.41■■■□□ 2.3
CSNK1E-203ENST00000396832 RIMBP3Q9UFD9 1639 aa29.41■■■□□ 2.3
CSNK1E-203ENST00000396832 DYNC1I1O14576 645 aa29.41■■■□□ 2.3
CSNK1E-203ENST00000396832 ZNF853P0CG23 659 aa29.41■■■□□ 2.3
CSNK1E-203ENST00000396832 TSHZ3Q63HK5 1081 aa29.41■■■□□ 2.3
CSNK1E-203ENST00000396832 MCM10Q7L590 875 aa29.41■■■□□ 2.3
CSNK1E-203ENST00000396832 API5Q9BZZ5 524 aaKnown RBP29.41■■■□□ 2.3
CSNK1E-203ENST00000396832 SDSP20132 328 aa29.39■■■□□ 2.29
CSNK1E-203ENST00000396832 MCM5P33992 734 aa29.39■■■□□ 2.29
CSNK1E-203ENST00000396832 NOL8Q76FK4 1167 aaKnown RBP29.39■■■□□ 2.29
CSNK1E-203ENST00000396832 RIMS2Q9UQ26 1411 aa29.39■■■□□ 2.29
CSNK1E-203ENST00000396832 DLG5Q8TDM6 1919 aa29.38■■■□□ 2.29
CSNK1E-203ENST00000396832 DIP2CQ9Y2E4 1556 aa29.38■■■□□ 2.29
CSNK1E-203ENST00000396832 MTERF4Q7Z6M4 381 aaKnown RBP29.38■■■□□ 2.29
CSNK1E-203ENST00000396832 MIS18AQ9NYP9 233 aa29.38■■■□□ 2.29
CSNK1E-203ENST00000396832 NUTM2FA1L443 756 aa29.38■■■□□ 2.29
CSNK1E-203ENST00000396832 MLECQ14165 292 aa29.38■■■□□ 2.29
CSNK1E-203ENST00000396832 USP26Q9BXU7 913 aa29.38■■■□□ 2.29
CSNK1E-203ENST00000396832 MEIS3Q99687 375 aa29.37■■■□□ 2.29
CSNK1E-203ENST00000396832 DCTPP1Q9H773 170 aa29.37■■■□□ 2.29
CSNK1E-203ENST00000396832 CWC22Q9HCG8 908 aaKnown RBP29.36■■■□□ 2.29
CSNK1E-203ENST00000396832 MSH6P52701 1360 aa29.36■■■□□ 2.29
CSNK1E-203ENST00000396832 TMEM131LA2VDJ0 1609 aa29.36■■■□□ 2.29
CSNK1E-203ENST00000396832 ALKQ9UM73 1620 aa29.36■■■□□ 2.29
CSNK1E-203ENST00000396832 LRSAM1Q6UWE0 723 aa29.35■■■□□ 2.29
CSNK1E-203ENST00000396832 CCDC39Q9UFE4 941 aa29.35■■■□□ 2.29
CSNK1E-203ENST00000396832 SLC4A10Q6U841 1118 aa29.35■■■□□ 2.29
CSNK1E-203ENST00000396832 SASS6Q6UVJ0 657 aa29.35■■■□□ 2.29
CSNK1E-203ENST00000396832 TXNDC2Q86VQ3 553 aa29.35■■■□□ 2.29
CSNK1E-203ENST00000396832 SYCE3A1L190 88 aa29.34■■■□□ 2.29
CSNK1E-203ENST00000396832 TMEM63CQ9P1W3 806 aa29.34■■■□□ 2.29
CSNK1E-203ENST00000396832 CLTCQ00610 1675 aaKnown RBP29.34■■■□□ 2.29
CSNK1E-203ENST00000396832 TSPOAP1O95153 1857 aa29.34■■■□□ 2.29
CSNK1E-203ENST00000396832 FOXD4L6Q3SYB3 417 aaPredicted RBP29.33■■■□□ 2.29
CSNK1E-203ENST00000396832 INTS3Q68E01 1043 aaKnown RBP29.33■■■□□ 2.29
CSNK1E-203ENST00000396832 SULT6B1Q6IMI4 303 aa29.33■■■□□ 2.29
CSNK1E-203ENST00000396832 FOXD4L3Q6VB84 417 aaPredicted RBP29.33■■■□□ 2.29
CSNK1E-203ENST00000396832 SMAP1Q8IYB5 467 aaPredicted RBP29.33■■■□□ 2.29
CSNK1E-203ENST00000396832 COG3Q96JB2 828 aa29.33■■■□□ 2.29
CSNK1E-203ENST00000396832 CDC42BPGQ6DT37 1551 aa29.33■■■□□ 2.29
CSNK1E-203ENST00000396832 CEP85Q6P2H3 762 aa29.33■■■□□ 2.29
CSNK1E-203ENST00000396832 ZDHHC9Q9Y397 364 aa29.32■■■□□ 2.28
CSNK1E-203ENST00000396832 TPRNQ4KMQ1 711 aa29.31■■■□□ 2.28
CSNK1E-203ENST00000396832 PREX1Q8TCU6 1659 aa29.3■■■□□ 2.28
CSNK1E-203ENST00000396832 F6X3S4 739 aa29.3■■■□□ 2.28
CSNK1E-203ENST00000396832 NSFL1CQ9UNZ2 370 aaKnown RBP29.3■■■□□ 2.28
CSNK1E-203ENST00000396832 ZBTB7CA1YPR0 619 aa29.3■■■□□ 2.28
CSNK1E-203ENST00000396832 ANKRD44Q8N8A2 993 aa29.29■■■□□ 2.28
CSNK1E-203ENST00000396832 ATP10DQ9P241 1426 aa29.29■■■□□ 2.28
CSNK1E-203ENST00000396832 RNF214Q8ND24 703 aa29.29■■■□□ 2.28
CSNK1E-203ENST00000396832 LMOD3Q0VAK6 560 aa29.28■■■□□ 2.28
CSNK1E-203ENST00000396832 ST18O60284 1047 aa29.27■■■□□ 2.28
CSNK1E-203ENST00000396832 REREQ9P2R6 1566 aa29.25■■■□□ 2.27
CSNK1E-203ENST00000396832 CASC1Q6TDU7 716 aa29.25■■■□□ 2.27
CSNK1E-203ENST00000396832 EXOC6BQ9Y2D4 811 aa29.25■■■□□ 2.27
CSNK1E-203ENST00000396832 SLC4A2P04920 1241 aa29.24■■■□□ 2.27
CSNK1E-203ENST00000396832 NUDT16Q96DE0 195 aaKnown RBP29.24■■■□□ 2.27
CSNK1E-203ENST00000396832 PRDM10Q9NQV6 1147 aa29.24■■■□□ 2.27
CSNK1E-203ENST00000396832 WASLO00401 505 aaPredicted RBP29.24■■■□□ 2.27
CSNK1E-203ENST00000396832 CPS1P31327 1500 aa29.24■■■□□ 2.27
CSNK1E-203ENST00000396832 PODXL2Q9NZ53 605 aa29.24■■■□□ 2.27
CSNK1E-203ENST00000396832 RTL1A6NKG5 1358 aa29.23■■■□□ 2.27
CSNK1E-203ENST00000396832 PTMAP06454 111 aaKnown RBP29.23■■■□□ 2.27
CSNK1E-203ENST00000396832 NECTIN2Q92692 538 aa29.23■■■□□ 2.27
CSNK1E-203ENST00000396832 G2E3Q7L622 706 aa29.23■■■□□ 2.27
CSNK1E-203ENST00000396832 NEO1Q92859 1461 aa29.22■■■□□ 2.27
CSNK1E-203ENST00000396832 RGS12O14924 1447 aa29.22■■■□□ 2.27
CSNK1E-203ENST00000396832 NEK4P51957 841 aa29.22■■■□□ 2.27
CSNK1E-203ENST00000396832 FOXO3O43524 673 aa29.21■■■□□ 2.27
CSNK1E-203ENST00000396832 EIF4A2Q14240 407 aaKnown RBP29.21■■■□□ 2.27
CSNK1E-203ENST00000396832 ATP7BP35670 1465 aa29.21■■■□□ 2.27
CSNK1E-203ENST00000396832 CDK12Q9NYV4 1490 aaPredicted RBP29.21■■■□□ 2.27
CSNK1E-203ENST00000396832 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.2■■■□□ 2.27
CSNK1E-203ENST00000396832 CCDC94Q9BW85 323 aaPredicted RBP29.2■■■□□ 2.27
CSNK1E-203ENST00000396832 EDC4Q6P2E9 1401 aaKnown RBP29.2■■■□□ 2.27
CSNK1E-203ENST00000396832 KIAA2012Q0VF49 1180 aa29.2■■■□□ 2.26
CSNK1E-203ENST00000396832 MBD3O95983 291 aa29.18■■■□□ 2.26
CSNK1E-203ENST00000396832 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.18■■■□□ 2.266e-6■□□□□ 8.2
CSNK1E-203ENST00000396832 HSP90AB2PQ58FF8 381 aa29.18■■■□□ 2.26
CSNK1E-203ENST00000396832 RPAP2Q8IXW5 612 aaPredicted RBP29.18■■■□□ 2.26
CSNK1E-203ENST00000396832 DNTTIP2Q5QJE6 756 aaKnown RBP29.17■■■□□ 2.26
CSNK1E-203ENST00000396832 MPNDQ8N594 471 aa29.17■■■□□ 2.26
CSNK1E-203ENST00000396832 ERC2O15083 957 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms