RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 MAP3K5Q99683 1374 aa16.55■□□□□ 0.24
TRIM39-204ENST00000396548 NRAPQ86VF7 1730 aa16.55■□□□□ 0.24
TRIM39-204ENST00000396548 ERICH6BQ5W0A0 696 aa16.54■□□□□ 0.24
TRIM39-204ENST00000396548 MCM10Q7L590 875 aa16.54■□□□□ 0.24
TRIM39-204ENST00000396548 CERKQ8TCT0 537 aa16.54■□□□□ 0.24
TRIM39-204ENST00000396548 SHANK3Q9BYB0 1731 aa16.54■□□□□ 0.24
TRIM39-204ENST00000396548 WDR17Q8IZU2 1322 aa16.54■□□□□ 0.24
TRIM39-204ENST00000396548 CT47B1P0C2W7 299 aaPredicted RBP16.54■□□□□ 0.24
TRIM39-204ENST00000396548 PRDM11Q9NQV5 511 aa16.54■□□□□ 0.24
TRIM39-204ENST00000396548 CEMIPQ8WUJ3 1361 aa16.54■□□□□ 0.24
TRIM39-204ENST00000396548 NEFLP07196 543 aa16.54■□□□□ 0.24
TRIM39-204ENST00000396548 GNAI1P63096 354 aa16.54■□□□□ 0.24
TRIM39-204ENST00000396548 IRX6P78412 446 aaPredicted RBP16.53■□□□□ 0.24
TRIM39-204ENST00000396548 MBIPQ9NS73 344 aa16.53■□□□□ 0.24
TRIM39-204ENST00000396548 GNAT3A8MTJ3 354 aa16.53■□□□□ 0.24
TRIM39-204ENST00000396548 CHL1O00533 1208 aa16.53■□□□□ 0.24
TRIM39-204ENST00000396548 UBAP1LF5GYI3 381 aa16.52■□□□□ 0.24
TRIM39-204ENST00000396548 RARSP54136 660 aaKnown RBP16.52■□□□□ 0.24
TRIM39-204ENST00000396548 EXOSC9Q06265 439 aaKnown RBP16.52■□□□□ 0.24
TRIM39-204ENST00000396548 OVOS2A0A0G2JMS6 1433 aa16.52■□□□□ 0.24
TRIM39-204ENST00000396548 KDM3BQ7LBC6 1761 aa16.52■□□□□ 0.24
TRIM39-204ENST00000396548 IL17REQ8NFR9 667 aa16.52■□□□□ 0.24
TRIM39-204ENST00000396548 SCN11AQ9UI33 1791 aa16.52■□□□□ 0.24
TRIM39-204ENST00000396548 WNK3Q9BYP7 1800 aa16.52■□□□□ 0.23
TRIM39-204ENST00000396548 PIP4K2BP78356 416 aa16.52■□□□□ 0.23
TRIM39-204ENST00000396548 AMOTQ4VCS5 1084 aa16.52■□□□□ 0.23
TRIM39-204ENST00000396548 BCAR3O75815 825 aa16.51■□□□□ 0.23
TRIM39-204ENST00000396548 PLEKHO1Q53GL0 409 aaPredicted RBP16.5■□□□□ 0.23
TRIM39-204ENST00000396548 NLRP2Q9NX02 1062 aa16.5■□□□□ 0.23
TRIM39-204ENST00000396548 NWD2Q9ULI1 1742 aa16.5■□□□□ 0.23
TRIM39-204ENST00000396548 AKAP4Q5JQC9 854 aa16.5■□□□□ 0.23
TRIM39-204ENST00000396548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRIM39-204ENST00000396548 PLIN1O60240 522 aa16.49■□□□□ 0.23
TRIM39-204ENST00000396548 HAP1P54257 671 aaPredicted RBP16.48■□□□□ 0.23
TRIM39-204ENST00000396548 CARD10Q9BWT7 1032 aa16.48■□□□□ 0.23
TRIM39-204ENST00000396548 RTF1Q92541 710 aaKnown RBP16.47■□□□□ 0.23
TRIM39-204ENST00000396548 VAMP4O75379 141 aa16.46■□□□□ 0.23
TRIM39-204ENST00000396548 CSB-PGBD3P0DP91 1061 aa16.46■□□□□ 0.23
TRIM39-204ENST00000396548 LARP1Q6PKG0 1096 aaKnown RBP16.46■□□□□ 0.23
TRIM39-204ENST00000396548 BABAM1Q9NWV8 329 aa16.46■□□□□ 0.23
TRIM39-204ENST00000396548 LAS1LQ9Y4W2 734 aaKnown RBP16.46■□□□□ 0.23
TRIM39-204ENST00000396548 C20orf194Q5TEA3 1177 aa16.46■□□□□ 0.23
TRIM39-204ENST00000396548 ZNF530Q6P9A1 599 aaPredicted RBP16.46■□□□□ 0.23
TRIM39-204ENST00000396548 TSPYL6Q8N831 410 aa16.46■□□□□ 0.23
TRIM39-204ENST00000396548 MRC1P22897 1456 aa16.46■□□□□ 0.23
TRIM39-204ENST00000396548 C8orf58Q8NAV2 365 aa16.46■□□□□ 0.22
TRIM39-204ENST00000396548 LGR6Q9HBX8 967 aa16.46■□□□□ 0.22
TRIM39-204ENST00000396548 DISP2A7MBM2 1401 aa16.45■□□□□ 0.22
TRIM39-204ENST00000396548 BRPF1P55201 1214 aaPredicted RBP16.45■□□□□ 0.22
TRIM39-204ENST00000396548 KDM6AO15550 1401 aaPredicted RBP16.45■□□□□ 0.22
TRIM39-204ENST00000396548 TATP17735 454 aaPredicted RBP16.45■□□□□ 0.22
TRIM39-204ENST00000396548 RAPGEF4Q8WZA2 1011 aa16.45■□□□□ 0.22
TRIM39-204ENST00000396548 BTG4Q9NY30 223 aa16.45■□□□□ 0.22
TRIM39-204ENST00000396548 SLIT2O94813 1529 aa16.45■□□□□ 0.22
TRIM39-204ENST00000396548 ZNF428Q96B54 188 aa16.44■□□□□ 0.22
TRIM39-204ENST00000396548 ALDH1L2Q3SY69 923 aa16.44■□□□□ 0.22
TRIM39-204ENST00000396548 PELP1Q8IZL8 1130 aaKnown RBP16.44■□□□□ 0.22
TRIM39-204ENST00000396548 RNMTO43148 476 aaKnown RBP16.44■□□□□ 0.22
TRIM39-204ENST00000396548 TOM1L2Q6ZVM7 507 aa16.43■□□□□ 0.22
TRIM39-204ENST00000396548 SSH1Q8WYL5 1049 aa16.43■□□□□ 0.22
TRIM39-204ENST00000396548 JCADQ9P266 1359 aa16.43■□□□□ 0.22
TRIM39-204ENST00000396548 PHKG2P15735 406 aa16.43■□□□□ 0.22
TRIM39-204ENST00000396548 TAF7Q15545 349 aaPredicted RBP16.42■□□□□ 0.22
TRIM39-204ENST00000396548 MIS18AQ9NYP9 233 aa16.42■□□□□ 0.22
TRIM39-204ENST00000396548 CYP27B1O15528 508 aa16.42■□□□□ 0.22
TRIM39-204ENST00000396548 SPG7Q9UQ90 795 aa16.42■□□□□ 0.22
TRIM39-204ENST00000396548 PPP4R2Q9NY27 417 aa16.41■□□□□ 0.22
TRIM39-204ENST00000396548 TWISTNBQ3B726 338 aaPredicted RBP16.41■□□□□ 0.22
TRIM39-204ENST00000396548 MPRIPQ6WCQ1 1025 aa16.41■□□□□ 0.22
TRIM39-204ENST00000396548 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.41■□□□□ 0.22
TRIM39-204ENST00000396548 EXOC6Q8TAG9 804 aa16.41■□□□□ 0.22
TRIM39-204ENST00000396548 STRN4Q9NRL3 753 aa16.41■□□□□ 0.22
TRIM39-204ENST00000396548 C1orf141Q5JVX7 400 aa16.4■□□□□ 0.22
TRIM39-204ENST00000396548 LRP6O75581 1613 aa16.4■□□□□ 0.22
TRIM39-204ENST00000396548 PDE3AQ14432 1141 aa16.4■□□□□ 0.22
TRIM39-204ENST00000396548 KRT24Q2M2I5 525 aa16.4■□□□□ 0.22
TRIM39-204ENST00000396548 TOGARAM1Q9Y4F4 1720 aa16.4■□□□□ 0.22
TRIM39-204ENST00000396548 EVA1CP58658 441 aa16.4■□□□□ 0.22
TRIM39-204ENST00000396548 TSPYL4Q9UJ04 414 aa16.4■□□□□ 0.22
TRIM39-204ENST00000396548 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.39■□□□□ 0.21
TRIM39-204ENST00000396548 BCL2L13Q9BXK5 485 aa16.39■□□□□ 0.21
TRIM39-204ENST00000396548 PAPPAQ13219 1627 aa16.39■□□□□ 0.21
TRIM39-204ENST00000396548 IL2RBP14784 551 aa16.39■□□□□ 0.21
TRIM39-204ENST00000396548 MRPL50Q8N5N7 158 aaKnown RBP16.39■□□□□ 0.21
TRIM39-204ENST00000396548 CRBNQ96SW2 442 aa16.39■□□□□ 0.21
TRIM39-204ENST00000396548 IFNL2Q8IZJ0 200 aa16.38■□□□□ 0.21
TRIM39-204ENST00000396548 HEG1Q9ULI3 1381 aa16.38■□□□□ 0.21
TRIM39-204ENST00000396548 NKX1-1Q15270 411 aaPredicted RBP16.38■□□□□ 0.21
TRIM39-204ENST00000396548 GLI3P10071 1580 aa16.37■□□□□ 0.21
TRIM39-204ENST00000396548 TNNQ9UQP3 1299 aa16.37■□□□□ 0.21
TRIM39-204ENST00000396548 SMC4Q9NTJ3 1288 aa16.37■□□□□ 0.21
TRIM39-204ENST00000396548 SPATA31A6Q5VVP1 1343 aa16.36■□□□□ 0.21
TRIM39-204ENST00000396548 ADAMTS2O95450 1211 aa16.36■□□□□ 0.21
TRIM39-204ENST00000396548 ZCRB1Q8TBF4 217 aaKnown RBP16.36■□□□□ 0.21
TRIM39-204ENST00000396548 UBR2Q8IWV8 1755 aa16.36■□□□□ 0.21
TRIM39-204ENST00000396548 SOS1Q07889 1333 aaPredicted RBP16.36■□□□□ 0.21
TRIM39-204ENST00000396548 PCDH11XQ9BZA7 1347 aa16.36■□□□□ 0.21
TRIM39-204ENST00000396548 PCDH11YQ9BZA8 1340 aa16.36■□□□□ 0.21
TRIM39-204ENST00000396548 BCL9LQ86UU0 1499 aa16.36■□□□□ 0.21
TRIM39-204ENST00000396548 ELL2O00472 640 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms