RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 DDX54Q8TDD1 881 aaKnown RBP23.77■■□□□ 1.4
TNFSF13-205ENST00000396545 ATF5Q9Y2D1 282 aaPredicted RBP23.77■■□□□ 1.4
TNFSF13-205ENST00000396545 RGPD2P0DJD1 1756 aa23.76■■□□□ 1.39
TNFSF13-205ENST00000396545 MTFR1LQ9H019 292 aa23.75■■□□□ 1.39
TNFSF13-205ENST00000396545 LRRC4BQ9NT99 713 aa23.75■■□□□ 1.39
TNFSF13-205ENST00000396545 MEGF6O75095 1541 aa23.75■■□□□ 1.39
TNFSF13-205ENST00000396545 SHANK3Q9BYB0 1731 aa23.75■■□□□ 1.39
TNFSF13-205ENST00000396545 RRS1Q15050 365 aaKnown RBP23.74■■□□□ 1.39
TNFSF13-205ENST00000396545 GGNBP2Q9H3C7 697 aa23.74■■□□□ 1.39
TNFSF13-205ENST00000396545 SGIP1Q9BQI5 828 aa23.74■■□□□ 1.39
TNFSF13-205ENST00000396545 UTRNP46939 3433 aa23.73■■□□□ 1.39
TNFSF13-205ENST00000396545 ZNF827Q17R98 1081 aa23.73■■□□□ 1.39
TNFSF13-205ENST00000396545 DCAF8L1A6NGE4 600 aa23.72■■□□□ 1.39
TNFSF13-205ENST00000396545 YY1P25490 414 aa23.72■■□□□ 1.39
TNFSF13-205ENST00000396545 DOT1LQ8TEK3 1739 aa23.71■■□□□ 1.39
TNFSF13-205ENST00000396545 KIF20BQ96Q89 1820 aa23.71■■□□□ 1.39
TNFSF13-205ENST00000396545 SLC27A3Q5K4L6 730 aa23.7■■□□□ 1.38
TNFSF13-205ENST00000396545 NBPF6Q5VWK0 638 aa23.7■■□□□ 1.38
TNFSF13-205ENST00000396545 ZCRB1Q8TBF4 217 aaKnown RBP23.7■■□□□ 1.38
TNFSF13-205ENST00000396545 NBPF4Q96M43 638 aa23.7■■□□□ 1.38
TNFSF13-205ENST00000396545 NSD2O96028 1365 aa23.7■■□□□ 1.38
TNFSF13-205ENST00000396545 PRIM1P49642 420 aaKnown RBP23.69■■□□□ 1.38
TNFSF13-205ENST00000396545 SMG6Q86US8 1419 aaKnown RBP23.69■■□□□ 1.38
TNFSF13-205ENST00000396545 AKT1S1Q96B36 256 aa23.68■■□□□ 1.38
TNFSF13-205ENST00000396545 SYTL4Q96C24 671 aaPredicted RBP23.68■■□□□ 1.38
TNFSF13-205ENST00000396545 FHDC1Q9C0D6 1143 aaPredicted RBP23.68■■□□□ 1.38
TNFSF13-205ENST00000396545 CGNL1Q0VF96 1302 aa23.67■■□□□ 1.38
TNFSF13-205ENST00000396545 INSRP06213 1382 aa23.67■■□□□ 1.38
TNFSF13-205ENST00000396545 QSER1Q2KHR3 1735 aa23.66■■□□□ 1.38
TNFSF13-205ENST00000396545 SYT17Q9BSW7 474 aa23.66■■□□□ 1.38
TNFSF13-205ENST00000396545 KIF24Q5T7B8 1368 aa23.66■■□□□ 1.38
TNFSF13-205ENST00000396545 LY75O60449 1722 aa23.66■■□□□ 1.38
TNFSF13-205ENST00000396545 USHBP1Q8N6Y0 703 aa23.65■■□□□ 1.38
TNFSF13-205ENST00000396545 FLT4P35916 1363 aa23.65■■□□□ 1.38
TNFSF13-205ENST00000396545 HSP90AB2PQ58FF8 381 aa23.65■■□□□ 1.38
TNFSF13-205ENST00000396545 CARD14Q9BXL6 1004 aa23.65■■□□□ 1.38
TNFSF13-205ENST00000396545 PRKRIP1Q9H875 184 aaPredicted RBP23.64■■□□□ 1.37
TNFSF13-205ENST00000396545 NSD3Q9BZ95 1437 aa23.63■■□□□ 1.37
TNFSF13-205ENST00000396545 RAPGEF4Q8WZA2 1011 aa23.63■■□□□ 1.37
TNFSF13-205ENST00000396545 ARXQ96QS3 562 aa23.63■■□□□ 1.37
TNFSF13-205ENST00000396545 MAP3K5Q99683 1374 aa23.62■■□□□ 1.37
TNFSF13-205ENST00000396545 KCNQ4P56696 695 aa23.62■■□□□ 1.37
TNFSF13-205ENST00000396545 POLR3GLQ9BT43 218 aa23.62■■□□□ 1.37
TNFSF13-205ENST00000396545 TUBGCP6Q96RT7 1819 aa23.61■■□□□ 1.37
TNFSF13-205ENST00000396545 PNPLA7Q6ZV29 1317 aa23.61■■□□□ 1.37
TNFSF13-205ENST00000396545 SLC16A10Q8TF71 515 aa23.61■■□□□ 1.37
TNFSF13-205ENST00000396545 COL24A1Q17RW2 1714 aa23.59■■□□□ 1.37
TNFSF13-205ENST00000396545 TATP17735 454 aaPredicted RBP23.59■■□□□ 1.37
TNFSF13-205ENST00000396545 TFCP2L1Q9NZI6 479 aa23.58■■□□□ 1.37
TNFSF13-205ENST00000396545 EMILIN1Q9Y6C2 1016 aa23.58■■□□□ 1.37
TNFSF13-205ENST00000396545 ANKRD26Q9UPS8 1709 aa23.58■■□□□ 1.37
TNFSF13-205ENST00000396545 PCDH11XQ9BZA7 1347 aa23.58■■□□□ 1.37
TNFSF13-205ENST00000396545 PCDH11YQ9BZA8 1340 aa23.58■■□□□ 1.37
TNFSF13-205ENST00000396545 CCNL1Q9UK58 526 aaPredicted RBP23.57■■□□□ 1.36
TNFSF13-205ENST00000396545 GTF3C3Q9Y5Q9 886 aa23.57■■□□□ 1.36
TNFSF13-205ENST00000396545 GOLGB1Q14789 3259 aaKnown RBP23.56■■□□□ 1.36
TNFSF13-205ENST00000396545 NCAPD2Q15021 1401 aa23.56■■□□□ 1.36
TNFSF13-205ENST00000396545 PKD1L3Q7Z443 1732 aa23.54■■□□□ 1.36
TNFSF13-205ENST00000396545 CYP27B1O15528 508 aa23.53■■□□□ 1.36
TNFSF13-205ENST00000396545 POLD1P28340 1107 aa23.52■■□□□ 1.36
TNFSF13-205ENST00000396545 TOGARAM1Q9Y4F4 1720 aa23.51■■□□□ 1.35
TNFSF13-205ENST00000396545 C5P01031 1676 aa23.5■■□□□ 1.35
TNFSF13-205ENST00000396545 PPM1GO15355 546 aaPredicted RBP23.49■■□□□ 1.35
TNFSF13-205ENST00000396545 PALLDQ8WX93 1383 aa23.49■■□□□ 1.35
TNFSF13-205ENST00000396545 MAP2P11137 1827 aaKnown RBP23.48■■□□□ 1.35
TNFSF13-205ENST00000396545 MPRIPQ6WCQ1 1025 aa23.48■■□□□ 1.35
TNFSF13-205ENST00000396545 ITGB4P16144 1822 aa23.47■■□□□ 1.35
TNFSF13-205ENST00000396545 CHD4Q14839 1912 aa23.47■■□□□ 1.35
TNFSF13-205ENST00000396545 COL23A1Q86Y22 540 aaPredicted RBP23.47■■□□□ 1.35
TNFSF13-205ENST00000396545 CCDC184Q52MB2 194 aa23.46■■□□□ 1.35
TNFSF13-205ENST00000396545 POLKQ9UBT6 870 aa23.46■■□□□ 1.35
TNFSF13-205ENST00000396545 TAF1LQ8IZX4 1826 aa23.46■■□□□ 1.35
TNFSF13-205ENST00000396545 NKX1-1Q15270 411 aaPredicted RBP23.45■■□□□ 1.34
TNFSF13-205ENST00000396545 KLHL34Q8N239 644 aa23.45■■□□□ 1.34
TNFSF13-205ENST00000396545 ZNF784Q8NCA9 323 aaPredicted RBP23.45■■□□□ 1.34
TNFSF13-205ENST00000396545 EYA1Q99502 592 aa23.45■■□□□ 1.34
TNFSF13-205ENST00000396545 PANK3Q9H999 370 aa23.45■■□□□ 1.34
TNFSF13-205ENST00000396545 PER1O15534 1290 aaPredicted RBP23.44■■□□□ 1.34
TNFSF13-205ENST00000396545 HMGB2P26583 209 aaKnown RBP23.44■■□□□ 1.34
TNFSF13-205ENST00000396545 SPG7Q9UQ90 795 aa23.44■■□□□ 1.34
TNFSF13-205ENST00000396545 MSH5O43196 834 aa23.43■■□□□ 1.34
TNFSF13-205ENST00000396545 SMARCC1Q92922 1105 aaPredicted RBP23.43■■□□□ 1.34
TNFSF13-205ENST00000396545 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.43■■□□□ 1.34
TNFSF13-205ENST00000396545 GPR162Q16538 588 aa23.42■■□□□ 1.34
TNFSF13-205ENST00000396545 PIGBQ92521 554 aa23.42■■□□□ 1.34
TNFSF13-205ENST00000396545 C4BP0C0L5 1744 aa23.41■■□□□ 1.34
TNFSF13-205ENST00000396545 RALBP1Q15311 655 aa23.41■■□□□ 1.34
TNFSF13-205ENST00000396545 NLGN2Q8NFZ4 835 aa23.41■■□□□ 1.34
TNFSF13-205ENST00000396545 MRS2Q9HD23 443 aa23.4■■□□□ 1.34
TNFSF13-205ENST00000396545 FLAD1Q8NFF5 587 aa23.4■■□□□ 1.34
TNFSF13-205ENST00000396545 EIF4A2Q14240 407 aaKnown RBP23.39■■□□□ 1.33
TNFSF13-205ENST00000396545 MSL1Q68DK7 614 aa23.39■■□□□ 1.33
TNFSF13-205ENST00000396545 PLEKHG2Q9H7P9 1386 aa23.38■■□□□ 1.33
TNFSF13-205ENST00000396545 NPC1L1Q9UHC9 1359 aa23.38■■□□□ 1.33
TNFSF13-205ENST00000396545 TNNT2P45379 298 aaPredicted RBP23.38■■□□□ 1.33
TNFSF13-205ENST00000396545 KNSTRNQ9Y448 316 aa23.38■■□□□ 1.33
TNFSF13-205ENST00000396545 PHKG2P15735 406 aa23.36■■□□□ 1.33
TNFSF13-205ENST00000396545 AMIGO3Q86WK7 504 aa23.36■■□□□ 1.33
TNFSF13-205ENST00000396545 UBR3Q6ZT12 1888 aa23.36■■□□□ 1.33
TNFSF13-205ENST00000396545 IFNL2Q8IZJ0 200 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms