RNA–Protein interactions for RNA: ENST00000396535.7

SHC4-202, Transcript of SHC adaptor protein 4, humanhuman

TSL 1 (best) BASIC

Gene SHC4, Length 2,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-202ENST00000396535 BRD1O95696 1058 aa8.57□□□□□ -1.04
SHC4-202ENST00000396535 TSPY4P0CV99 314 aa8.57□□□□□ -1.04
SHC4-202ENST00000396535 TSPY10P0CW01 314 aa8.57□□□□□ -1.04
SHC4-202ENST00000396535 GCC1Q96CN9 775 aa8.57□□□□□ -1.04
SHC4-202ENST00000396535 ADGRB2O60241 1585 aa8.57□□□□□ -1.04
SHC4-202ENST00000396535 ABCA8O94911 1581 aa8.57□□□□□ -1.04
SHC4-202ENST00000396535 ST18O60284 1047 aa8.56□□□□□ -1.04
SHC4-202ENST00000396535 KRT222Q8N1A0 295 aa8.56□□□□□ -1.04
SHC4-202ENST00000396535 MED14O60244 1454 aa8.56□□□□□ -1.04
SHC4-202ENST00000396535 ATP10AO60312 1499 aa8.56□□□□□ -1.04
SHC4-202ENST00000396535 ERICH4A6NGS2 130 aa8.56□□□□□ -1.04
SHC4-202ENST00000396535 KDM4AO75164 1064 aa8.56□□□□□ -1.04
SHC4-202ENST00000396535 GADD45BO75293 160 aaPredicted RBP8.56□□□□□ -1.04
SHC4-202ENST00000396535 NAA30Q147X3 362 aaPredicted RBP8.56□□□□□ -1.04
SHC4-202ENST00000396535 FAM53CQ9NYF3 392 aa8.56□□□□□ -1.04
SHC4-202ENST00000396535 PPRC1Q5VV67 1664 aaKnown RBP8.56□□□□□ -1.04
SHC4-202ENST00000396535 HCLS1P14317 486 aaPredicted RBP8.56□□□□□ -1.04
SHC4-202ENST00000396535 TSPYL1Q9H0U9 437 aa8.56□□□□□ -1.04
SHC4-202ENST00000396535 ARHGEF5Q12774 1597 aa8.55□□□□□ -1.04
SHC4-202ENST00000396535 TTC37Q6PGP7 1564 aa8.55□□□□□ -1.04
SHC4-202ENST00000396535 SMTNL1A8MU46 457 aa8.55□□□□□ -1.04
SHC4-202ENST00000396535 AP5Z1O43299 807 aa8.55□□□□□ -1.04
SHC4-202ENST00000396535 SECISBP2LQ93073 1101 aaKnown RBP8.55□□□□□ -1.04
SHC4-202ENST00000396535 ERVK-7P63135 1459 aa8.55□□□□□ -1.04
SHC4-202ENST00000396535 ZNF518AQ6AHZ1 1483 aa8.55□□□□□ -1.04
SHC4-202ENST00000396535 ABCC11Q96J66 1382 aa8.55□□□□□ -1.04
SHC4-202ENST00000396535 FEZ2Q9UHY8 353 aaPredicted RBP8.55□□□□□ -1.04
SHC4-202ENST00000396535 TPM3P06753 285 aa8.54□□□□□ -1.04
SHC4-202ENST00000396535 FAM193AP78312 1265 aa8.54□□□□□ -1.04
SHC4-202ENST00000396535 AEBP1Q8IUX7 1158 aa8.54□□□□□ -1.04
SHC4-202ENST00000396535 IQGAP3Q86VI3 1631 aa8.54□□□□□ -1.04
SHC4-202ENST00000396535 ADGRL1O94910 1474 aa8.54□□□□□ -1.04
SHC4-202ENST00000396535 SMARCA5O60264 1052 aaPredicted RBP8.54□□□□□ -1.04
SHC4-202ENST00000396535 JPH4Q96JJ6 628 aa8.54□□□□□ -1.04
SHC4-202ENST00000396535 CCDC183Q5T5S1 534 aa8.53□□□□□ -1.04
SHC4-202ENST00000396535 SIRT2Q8IXJ6 389 aa8.53□□□□□ -1.04
SHC4-202ENST00000396535 GDPD2Q9HCC8 539 aa8.53□□□□□ -1.04
SHC4-202ENST00000396535 DUOX2Q9NRD8 1548 aa8.53□□□□□ -1.04
SHC4-202ENST00000396535 KMT5BQ4FZB7 885 aa8.53□□□□□ -1.04
SHC4-202ENST00000396535 CREBRFQ8IUR6 639 aa8.53□□□□□ -1.04
SHC4-202ENST00000396535 SEMA3EO15041 775 aa8.52□□□□□ -1.05
SHC4-202ENST00000396535 ZBTB7BO15156 539 aaPredicted RBP8.52□□□□□ -1.05
SHC4-202ENST00000396535 IPO8O15397 1037 aaKnown RBP8.52□□□□□ -1.05
SHC4-202ENST00000396535 CAPN15O75808 1086 aa8.52□□□□□ -1.05
SHC4-202ENST00000396535 CYP2C19P33261 490 aa8.52□□□□□ -1.05
SHC4-202ENST00000396535 HNRNPMP52272 730 aaKnown RBP eCLIP8.52□□□□□ -1.05
SHC4-202ENST00000396535 USP48Q86UV5 1035 aa8.52□□□□□ -1.05
SHC4-202ENST00000396535 PLEKHM2Q8IWE5 1019 aa8.52□□□□□ -1.05
SHC4-202ENST00000396535 TMX3Q96JJ7 454 aa8.52□□□□□ -1.05
SHC4-202ENST00000396535 TRERF1Q96PN7 1200 aa8.52□□□□□ -1.05
SHC4-202ENST00000396535 ST7Q9NRC1 585 aa8.52□□□□□ -1.05
SHC4-202ENST00000396535 HNRNPH2P55795 449 aaKnown RBP8.52□□□□□ -1.05
SHC4-202ENST00000396535 TTC22Q5TAA0 569 aa8.52□□□□□ -1.05
SHC4-202ENST00000396535 INTS3Q68E01 1043 aaKnown RBP8.52□□□□□ -1.05
SHC4-202ENST00000396535 MORC1Q86VD1 984 aa8.52□□□□□ -1.05
SHC4-202ENST00000396535 SPC24Q8NBT2 197 aa8.52□□□□□ -1.05
SHC4-202ENST00000396535 ZNF397Q8NF99 534 aaPredicted RBP8.52□□□□□ -1.05
SHC4-202ENST00000396535 ZBTB9Q96C00 473 aa8.52□□□□□ -1.05
SHC4-202ENST00000396535 FUCA2Q9BTY2 467 aa8.52□□□□□ -1.05
SHC4-202ENST00000396535 SPHKAPQ2M3C7 1700 aa8.52□□□□□ -1.05
SHC4-202ENST00000396535 RBM6P78332 1123 aaKnown RBP8.51□□□□□ -1.05
SHC4-202ENST00000396535 RAD51AP2Q09MP3 1159 aa8.51□□□□□ -1.05
SHC4-202ENST00000396535 CUL4AQ13619 759 aa8.51□□□□□ -1.05
SHC4-202ENST00000396535 CARMIL2Q6F5E8 1435 aa8.51□□□□□ -1.05
SHC4-202ENST00000396535 CD109Q6YHK3 1445 aa8.51□□□□□ -1.05
SHC4-202ENST00000396535 C16orf45Q96MC5 204 aaPredicted RBP8.51□□□□□ -1.05
SHC4-202ENST00000396535 MX1P20591 662 aa8.51□□□□□ -1.05
SHC4-202ENST00000396535 TMEM87AQ8NBN3 555 aa8.51□□□□□ -1.05
SHC4-202ENST00000396535 YY1AP1Q9H869 796 aa8.51□□□□□ -1.05
SHC4-202ENST00000396535 NSD3Q9BZ95 1437 aa8.51□□□□□ -1.05
SHC4-202ENST00000396535 PTGS1P23219 599 aa8.5□□□□□ -1.05
SHC4-202ENST00000396535 FOXD4L6Q3SYB3 417 aaPredicted RBP8.5□□□□□ -1.05
SHC4-202ENST00000396535 FOXD4L3Q6VB84 417 aaPredicted RBP8.5□□□□□ -1.05
SHC4-202ENST00000396535 CCDC112Q8NEF3 446 aa8.5□□□□□ -1.05
SHC4-202ENST00000396535 EFCC1Q9HA90 598 aa8.5□□□□□ -1.05
SHC4-202ENST00000396535 PAXBP1Q9Y5B6 917 aa8.5□□□□□ -1.05
SHC4-202ENST00000396535 ZCCHC11Q5TAX3 1644 aaKnown RBP8.5□□□□□ -1.05
SHC4-202ENST00000396535 GOLGA6L6A8MZA4 724 aa8.5□□□□□ -1.05
SHC4-202ENST00000396535 TNNT1P13805 278 aa8.5□□□□□ -1.05
SHC4-202ENST00000396535 MTHFSP49914 203 aa8.5□□□□□ -1.05
SHC4-202ENST00000396535 ZC3H15Q8WU90 426 aaKnown RBP8.5□□□□□ -1.05
SHC4-202ENST00000396535 KIF1BPQ96EK5 621 aa8.5□□□□□ -1.05
SHC4-202ENST00000396535 TRIM35Q9UPQ4 493 aa8.5□□□□□ -1.05
SHC4-202ENST00000396535 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.5□□□□□ -1.05
SHC4-202ENST00000396535 PIK3R4Q99570 1358 aa8.5□□□□□ -1.05
SHC4-202ENST00000396535 ALDH1L2Q3SY69 923 aa8.49□□□□□ -1.05
SHC4-202ENST00000396535 FBXO38Q6PIJ6 1188 aa8.49□□□□□ -1.05
SHC4-202ENST00000396535 GEMIN8Q9NWZ8 242 aaKnown RBP8.49□□□□□ -1.05
SHC4-202ENST00000396535 RPAP1Q9BWH6 1393 aaPredicted RBP8.49□□□□□ -1.05
SHC4-202ENST00000396535 SOX12O15370 315 aa8.49□□□□□ -1.05
SHC4-202ENST00000396535 U2AF1L5P0DN76 240 aaPredicted RBP8.49□□□□□ -1.05
SHC4-202ENST00000396535 MMP14P50281 582 aa8.49□□□□□ -1.05
SHC4-202ENST00000396535 U2AF1Q01081 240 aaKnown RBP eCLIP8.49□□□□□ -1.05
SHC4-202ENST00000396535 LRMPQ12912 555 aa8.49□□□□□ -1.05
SHC4-202ENST00000396535 INTS4Q96HW7 963 aaKnown RBP8.49□□□□□ -1.05
SHC4-202ENST00000396535 ZNF446Q9NWS9 450 aa8.49□□□□□ -1.05
SHC4-202ENST00000396535 SPAG9O60271 1321 aaKnown RBP8.48□□□□□ -1.05
SHC4-202ENST00000396535 IL16Q14005 1332 aa8.48□□□□□ -1.05
SHC4-202ENST00000396535 SDSP20132 328 aa8.48□□□□□ -1.05
SHC4-202ENST00000396535 NEK4P51957 841 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms