RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 FCHSD2O94868 740 aa28.35■■■□□ 2.13
FXN-202ENST00000396364 OVOS2A0A0G2JMS6 1433 aa28.35■■■□□ 2.13
FXN-202ENST00000396364 PDE3BQ13370 1112 aa28.34■■■□□ 2.13
FXN-202ENST00000396364 SPG7Q9UQ90 795 aa28.34■■■□□ 2.13
FXN-202ENST00000396364 MEGF6O75095 1541 aa28.33■■■□□ 2.13
FXN-202ENST00000396364 LRRC37A3O60309 1634 aa28.33■■■□□ 2.13
FXN-202ENST00000396364 AMOTQ4VCS5 1084 aa28.33■■■□□ 2.13
FXN-202ENST00000396364 AEBP1Q8IUX7 1158 aa28.33■■■□□ 2.13
FXN-202ENST00000396364 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.33■■■□□ 2.13
FXN-202ENST00000396364 RGS12O14924 1447 aa28.33■■■□□ 2.13
FXN-202ENST00000396364 TNS2Q63HR2 1409 aa28.33■■■□□ 2.13
FXN-202ENST00000396364 PLEKHO1Q53GL0 409 aaPredicted RBP28.32■■■□□ 2.12
FXN-202ENST00000396364 ZCRB1Q8TBF4 217 aaKnown RBP28.32■■■□□ 2.12
FXN-202ENST00000396364 MIER1Q8N108 512 aa28.29■■■□□ 2.12
FXN-202ENST00000396364 RSPH6AQ9H0K4 717 aa28.29■■■□□ 2.12
FXN-202ENST00000396364 PKD1L3Q7Z443 1732 aa28.29■■■□□ 2.12
FXN-202ENST00000396364 PCDH11XQ9BZA7 1347 aa28.28■■■□□ 2.12
FXN-202ENST00000396364 PCDH11YQ9BZA8 1340 aa28.28■■■□□ 2.12
FXN-202ENST00000396364 PRKAR2BP31323 418 aa28.28■■■□□ 2.12
FXN-202ENST00000396364 KRT27Q7Z3Y8 459 aa28.28■■■□□ 2.12
FXN-202ENST00000396364 MAPK8IP3Q9UPT6 1336 aa28.27■■■□□ 2.12
FXN-202ENST00000396364 CCDC184Q52MB2 194 aa28.27■■■□□ 2.12
FXN-202ENST00000396364 BRWD3Q6RI45 1802 aa28.27■■■□□ 2.12
FXN-202ENST00000396364 PNISRQ8TF01 805 aaKnown RBP28.25■■■□□ 2.11
FXN-202ENST00000396364 ADAMTS8Q9UP79 889 aa28.24■■■□□ 2.11
FXN-202ENST00000396364 C1orf141Q5JVX7 400 aa28.23■■■□□ 2.11
FXN-202ENST00000396364 GAS2L2Q8NHY3 880 aa28.23■■■□□ 2.11
FXN-202ENST00000396364 DDX54Q8TDD1 881 aaKnown RBP28.22■■■□□ 2.11
FXN-202ENST00000396364 IFNL2Q8IZJ0 200 aa28.21■■■□□ 2.11
FXN-202ENST00000396364 HSP90AB1P08238 724 aaKnown RBP28.2■■■□□ 2.1
FXN-202ENST00000396364 ZNF530Q6P9A1 599 aaPredicted RBP28.2■■■□□ 2.1
FXN-202ENST00000396364 SHANK3Q9BYB0 1731 aa28.2■■■□□ 2.1
FXN-202ENST00000396364 RUNDC1Q96C34 613 aa28.19■■■□□ 2.1
FXN-202ENST00000396364 FAM9BQ8IZU0 186 aa28.18■■■□□ 2.1
FXN-202ENST00000396364 FAM196AQ6ZSG2 479 aa28.17■■■□□ 2.1
FXN-202ENST00000396364 MARCH10Q8NA82 808 aaPredicted RBP28.16■■■□□ 2.1
FXN-202ENST00000396364 PLEKHF1Q96S99 279 aa28.16■■■□□ 2.1
FXN-202ENST00000396364 PHKG2P15735 406 aa28.15■■■□□ 2.1
FXN-202ENST00000396364 MTHFSDQ2M296 383 aaKnown RBP28.15■■■□□ 2.1
FXN-202ENST00000396364 AKAP4Q5JQC9 854 aa28.15■■■□□ 2.1
FXN-202ENST00000396364 PHACTR3Q96KR7 559 aa28.14■■■□□ 2.1
FXN-202ENST00000396364 BCL9O00512 1426 aa28.13■■■□□ 2.09
FXN-202ENST00000396364 CYP27B1O15528 508 aa28.13■■■□□ 2.09
FXN-202ENST00000396364 CCDC146Q8IYE0 955 aa28.13■■■□□ 2.09
FXN-202ENST00000396364 NKX1-1Q15270 411 aaPredicted RBP28.11■■■□□ 2.09
FXN-202ENST00000396364 DCAF5Q96JK2 942 aa28.11■■■□□ 2.09
FXN-202ENST00000396364 GNAT3A8MTJ3 354 aa28.1■■■□□ 2.09
FXN-202ENST00000396364 NFE2L2Q16236 605 aa28.1■■■□□ 2.09
FXN-202ENST00000396364 RTF1Q92541 710 aaKnown RBP28.1■■■□□ 2.09
FXN-202ENST00000396364 MAP3K5Q99683 1374 aa28.1■■■□□ 2.09
FXN-202ENST00000396364 LMOD3Q0VAK6 560 aa28.09■■■□□ 2.09
FXN-202ENST00000396364 HTATSF1O43719 755 aaKnown RBP28.07■■■□□ 2.08
FXN-202ENST00000396364 FAM182BQ5T319 152 aa28.07■■■□□ 2.08
FXN-202ENST00000396364 KAT6BQ8WYB5 2073 aa28.05■■■□□ 2.08
FXN-202ENST00000396364 DOT1LQ8TEK3 1739 aa28.04■■■□□ 2.08
FXN-202ENST00000396364 TMPOP42166 694 aaKnown RBP28.04■■■□□ 2.08
FXN-202ENST00000396364 DLG5Q8TDM6 1919 aa28.03■■■□□ 2.08
FXN-202ENST00000396364 RIPK4P57078 832 aa28.03■■■□□ 2.08
FXN-202ENST00000396364 SBF2Q86WG5 1849 aa28.03■■■□□ 2.08
FXN-202ENST00000396364 SCN11AQ9UI33 1791 aa28.03■■■□□ 2.08
FXN-202ENST00000396364 ERVV-2B6SEH9 535 aa28.02■■■□□ 2.08
FXN-202ENST00000396364 APAF1O14727 1248 aa28.02■■■□□ 2.08
FXN-202ENST00000396364 MPRIPQ6WCQ1 1025 aa28.02■■■□□ 2.08
FXN-202ENST00000396364 NHSQ6T4R5 1651 aa28.02■■■□□ 2.08
FXN-202ENST00000396364 VIRMAQ69YN4 1812 aaKnown RBP28.02■■■□□ 2.08
FXN-202ENST00000396364 ILDR2Q71H61 639 aa28.01■■■□□ 2.07
FXN-202ENST00000396364 NGEFQ8N5V2 710 aa28.01■■■□□ 2.07
FXN-202ENST00000396364 SYTL4Q96C24 671 aaPredicted RBP28.01■■■□□ 2.07
FXN-202ENST00000396364 SF3B2Q13435 895 aaKnown RBP28■■■□□ 2.07
FXN-202ENST00000396364 NEUROD2Q15784 382 aa28■■■□□ 2.07
FXN-202ENST00000396364 CCDC125Q86Z20 511 aa28■■■□□ 2.07
FXN-202ENST00000396364 RNMTO43148 476 aaKnown RBP27.99■■■□□ 2.07
FXN-202ENST00000396364 CABP4P57796 275 aa27.99■■■□□ 2.07
FXN-202ENST00000396364 ACSBG1Q96GR2 724 aa27.99■■■□□ 2.07
FXN-202ENST00000396364 BCL11BQ9C0K0 894 aaPredicted RBP27.99■■■□□ 2.07
FXN-202ENST00000396364 TMOD3Q9NYL9 352 aa27.99■■■□□ 2.07
FXN-202ENST00000396364 TEFQ10587 303 aa27.98■■■□□ 2.07
FXN-202ENST00000396364 NCBP3Q53F19 620 aaKnown RBP27.98■■■□□ 2.07
FXN-202ENST00000396364 KDM6AO15550 1401 aaPredicted RBP27.98■■■□□ 2.07
FXN-202ENST00000396364 ADAMTS7Q9UKP4 1686 aa27.97■■■□□ 2.07
FXN-202ENST00000396364 PRIM1P49642 420 aaKnown RBP27.97■■■□□ 2.07
FXN-202ENST00000396364 RRP7AQ9Y3A4 280 aaKnown RBP27.97■■■□□ 2.07
FXN-202ENST00000396364 TOGARAM1Q9Y4F4 1720 aa27.97■■■□□ 2.07
FXN-202ENST00000396364 ITGB4P16144 1822 aa27.97■■■□□ 2.07
FXN-202ENST00000396364 TRIM37O94972 964 aa27.96■■■□□ 2.07
FXN-202ENST00000396364 CALD1Q05682 793 aaKnown RBP27.94■■■□□ 2.06
FXN-202ENST00000396364 LGR6Q9HBX8 967 aa27.94■■■□□ 2.06
FXN-202ENST00000396364 IL17REQ8NFR9 667 aa27.93■■■□□ 2.06
FXN-202ENST00000396364 SLC52A2Q9HAB3 445 aa27.93■■■□□ 2.06
FXN-202ENST00000396364 CEMIPQ8WUJ3 1361 aa27.93■■■□□ 2.06
FXN-202ENST00000396364 MRC1P22897 1456 aa27.92■■■□□ 2.06
FXN-202ENST00000396364 MCM10Q7L590 875 aa27.92■■■□□ 2.06
FXN-202ENST00000396364 CCDC27Q2M243 656 aa27.91■■■□□ 2.06
FXN-202ENST00000396364 EP400Q96L91 3159 aa27.91■■■□□ 2.06
FXN-202ENST00000396364 KCNQ2O43526 872 aa27.9■■■□□ 2.06
FXN-202ENST00000396364 NFATC2IPQ8NCF5 419 aa27.9■■■□□ 2.06
FXN-202ENST00000396364 BTAF1O14981 1849 aa27.9■■■□□ 2.06
FXN-202ENST00000396364 SMARCC1Q92922 1105 aaPredicted RBP27.89■■■□□ 2.06
FXN-202ENST00000396364 TNS1Q9HBL0 1735 aaKnown RBP27.89■■■□□ 2.05
FXN-202ENST00000396364 DCTN1Q14203 1278 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms