RNA–Protein interactions for RNA: ENST00000396247.7

RDH13-202, Transcript of retinol dehydrogenase 13, humanhuman

TSL 1 (best) BASIC

Gene RDH13, Length 1,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-202ENST00000396247 CHL1O00533 1208 aa21.71■■□□□ 1.07
RDH13-202ENST00000396247 VAMP4O75379 141 aa21.71■■□□□ 1.07
RDH13-202ENST00000396247 AXIN2Q9Y2T1 843 aa21.71■■□□□ 1.07
RDH13-202ENST00000396247 COG6Q9Y2V7 657 aa21.71■■□□□ 1.07
RDH13-202ENST00000396247 GNAT3A8MTJ3 354 aa21.7■■□□□ 1.06
RDH13-202ENST00000396247 MS4A1P11836 297 aa21.7■■□□□ 1.06
RDH13-202ENST00000396247 TSPYL6Q8N831 410 aa21.7■■□□□ 1.06
RDH13-202ENST00000396247 KIF16BQ96L93 1317 aa21.69■■□□□ 1.06
RDH13-202ENST00000396247 TWISTNBQ3B726 338 aaPredicted RBP21.69■■□□□ 1.06
RDH13-202ENST00000396247 CABLES1Q8TDN4 633 aa21.69■■□□□ 1.06
RDH13-202ENST00000396247 TNNQ9UQP3 1299 aa21.69■■□□□ 1.06
RDH13-202ENST00000396247 RGPD2P0DJD1 1756 aa21.69■■□□□ 1.06
RDH13-202ENST00000396247 RLBP1P12271 317 aa21.68■■□□□ 1.06
RDH13-202ENST00000396247 C8orf58Q8NAV2 365 aa21.68■■□□□ 1.06
RDH13-202ENST00000396247 MAP3K5Q99683 1374 aa21.68■■□□□ 1.06
RDH13-202ENST00000396247 SOS2Q07890 1332 aaPredicted RBP21.68■■□□□ 1.06
RDH13-202ENST00000396247 NCAPD2Q15021 1401 aa21.68■■□□□ 1.06
RDH13-202ENST00000396247 ELL2O00472 640 aaPredicted RBP21.67■■□□□ 1.06
RDH13-202ENST00000396247 BRPF1P55201 1214 aaPredicted RBP21.67■■□□□ 1.06
RDH13-202ENST00000396247 CLUAP1Q96AJ1 413 aa21.67■■□□□ 1.06
RDH13-202ENST00000396247 IPO8O15397 1037 aaKnown RBP21.67■■□□□ 1.06
RDH13-202ENST00000396247 FTSJ3Q8IY81 847 aaKnown RBP21.67■■□□□ 1.06
RDH13-202ENST00000396247 DZIP1LQ8IYY4 767 aaKnown RBP21.67■■□□□ 1.06
RDH13-202ENST00000396247 NOB1Q9ULX3 412 aaKnown RBP21.67■■□□□ 1.06
RDH13-202ENST00000396247 ERBB3P21860 1342 aa21.66■■□□□ 1.06
RDH13-202ENST00000396247 ATF7IPQ6VMQ6 1270 aa21.66■■□□□ 1.06
RDH13-202ENST00000396247 CRYBG1Q9Y4K1 1723 aa21.65■■□□□ 1.06
RDH13-202ENST00000396247 TRIM27P14373 513 aa21.65■■□□□ 1.06
RDH13-202ENST00000396247 CAMTA1Q9Y6Y1 1673 aa21.65■■□□□ 1.06
RDH13-202ENST00000396247 KIAA0232Q92628 1395 aa21.65■■□□□ 1.06
RDH13-202ENST00000396247 AAMPQ13685 434 aa21.65■■□□□ 1.06
RDH13-202ENST00000396247 RGPD5Q99666 1765 aa21.64■■□□□ 1.06
RDH13-202ENST00000396247 LRRC37A3O60309 1634 aa21.64■■□□□ 1.05
RDH13-202ENST00000396247 HAP1P54257 671 aaPredicted RBP21.63■■□□□ 1.05
RDH13-202ENST00000396247 CPDO75976 1380 aa21.63■■□□□ 1.05
RDH13-202ENST00000396247 ABCC6O95255 1503 aa21.63■■□□□ 1.05
RDH13-202ENST00000396247 PLEKHO1Q53GL0 409 aaPredicted RBP21.63■■□□□ 1.05
RDH13-202ENST00000396247 MRPL50Q8N5N7 158 aaKnown RBP21.63■■□□□ 1.05
RDH13-202ENST00000396247 TSPYL4Q9UJ04 414 aa21.63■■□□□ 1.05
RDH13-202ENST00000396247 KDM2BQ8NHM5 1336 aa21.62■■□□□ 1.05
RDH13-202ENST00000396247 MVPQ14764 893 aaKnown RBP21.62■■□□□ 1.05
RDH13-202ENST00000396247 CENPQQ7L2Z9 268 aaPredicted RBP21.62■■□□□ 1.05
RDH13-202ENST00000396247 IL17REQ8NFR9 667 aa21.62■■□□□ 1.05
RDH13-202ENST00000396247 COL18A1P39060 1754 aa21.62■■□□□ 1.05
RDH13-202ENST00000396247 AMOTQ4VCS5 1084 aa21.61■■□□□ 1.05
RDH13-202ENST00000396247 BCL11AQ9H165 835 aa21.61■■□□□ 1.05
RDH13-202ENST00000396247 MIS18AQ9NYP9 233 aa21.61■■□□□ 1.05
RDH13-202ENST00000396247 CHRNA2Q15822 529 aa21.59■■□□□ 1.05
RDH13-202ENST00000396247 KRT24Q2M2I5 525 aa21.59■■□□□ 1.05
RDH13-202ENST00000396247 LMO7Q8WWI1 1683 aa21.59■■□□□ 1.05
RDH13-202ENST00000396247 NHSL1Q5SYE7 1610 aa21.59■■□□□ 1.05
RDH13-202ENST00000396247 ZNF530Q6P9A1 599 aaPredicted RBP21.59■■□□□ 1.05
RDH13-202ENST00000396247 ARHGAP45Q92619 1136 aa21.59■■□□□ 1.05
RDH13-202ENST00000396247 NLRP2Q9NX02 1062 aa21.59■■□□□ 1.05
RDH13-202ENST00000396247 AKAP4Q5JQC9 854 aa21.58■■□□□ 1.05
RDH13-202ENST00000396247 TCERG1O14776 1098 aaKnown RBP21.57■■□□□ 1.04
RDH13-202ENST00000396247 BABAM1Q9NWV8 329 aa21.57■■□□□ 1.04
RDH13-202ENST00000396247 TAF7Q15545 349 aaPredicted RBP21.57■■□□□ 1.04
RDH13-202ENST00000396247 CEMIPQ8WUJ3 1361 aa21.57■■□□□ 1.04
RDH13-202ENST00000396247 CSB-PGBD3P0DP91 1061 aa21.56■■□□□ 1.04
RDH13-202ENST00000396247 ITPRIPQ8IWB1 547 aa21.56■■□□□ 1.04
RDH13-202ENST00000396247 DDX19BQ9UMR2 479 aa21.56■■□□□ 1.04
RDH13-202ENST00000396247 C1orf141Q5JVX7 400 aa21.55■■□□□ 1.04
RDH13-202ENST00000396247 TMEM57Q8N5G2 664 aa21.55■■□□□ 1.04
RDH13-202ENST00000396247 NOP58Q9Y2X3 529 aaKnown RBP21.55■■□□□ 1.04
RDH13-202ENST00000396247 FAM208AQ9UK61 1670 aaKnown RBP21.54■■□□□ 1.04
RDH13-202ENST00000396247 RAPGEF4Q8WZA2 1011 aa21.54■■□□□ 1.04
RDH13-202ENST00000396247 PRDM11Q9NQV5 511 aa21.54■■□□□ 1.04
RDH13-202ENST00000396247 LGR6Q9HBX8 967 aa21.53■■□□□ 1.04
RDH13-202ENST00000396247 LTBP4Q8N2S1 1624 aa21.53■■□□□ 1.04
RDH13-202ENST00000396247 API5Q9BZZ5 524 aaKnown RBP21.52■■□□□ 1.04
RDH13-202ENST00000396247 IGHDP01880 384 aa21.51■■□□□ 1.03
RDH13-202ENST00000396247 TATP17735 454 aaPredicted RBP21.51■■□□□ 1.03
RDH13-202ENST00000396247 PCDHB15Q9Y5E8 787 aa21.51■■□□□ 1.03
RDH13-202ENST00000396247 ABCA3Q99758 1704 aa21.51■■□□□ 1.03
RDH13-202ENST00000396247 ANP32AP39687 249 aaKnown RBP21.5■■□□□ 1.03
RDH13-202ENST00000396247 MPRIPQ6WCQ1 1025 aa21.5■■□□□ 1.03
RDH13-202ENST00000396247 ABCC4O15439 1325 aa21.49■■□□□ 1.03
RDH13-202ENST00000396247 OVOS2A0A0G2JMS6 1433 aa21.49■■□□□ 1.03
RDH13-202ENST00000396247 RNMTO43148 476 aaKnown RBP21.49■■□□□ 1.03
RDH13-202ENST00000396247 TEFQ10587 303 aa21.49■■□□□ 1.03
RDH13-202ENST00000396247 SOS1Q07889 1333 aaPredicted RBP21.49■■□□□ 1.03
RDH13-202ENST00000396247 PLEKHG2Q9H7P9 1386 aa21.48■■□□□ 1.03
RDH13-202ENST00000396247 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.48■■□□□ 1.03
RDH13-202ENST00000396247 SPG7Q9UQ90 795 aa21.47■■□□□ 1.03
RDH13-202ENST00000396247 MEGF6O75095 1541 aa21.47■■□□□ 1.03
RDH13-202ENST00000396247 ROBO1Q9Y6N7 1651 aa21.47■■□□□ 1.03
RDH13-202ENST00000396247 ZBTB40Q9NUA8 1239 aa21.47■■□□□ 1.03
RDH13-202ENST00000396247 WDR17Q8IZU2 1322 aa21.46■■□□□ 1.03
RDH13-202ENST00000396247 SLC4A2P04920 1241 aa21.46■■□□□ 1.03
RDH13-202ENST00000396247 CHMP4BQ9H444 224 aaKnown RBP21.46■■□□□ 1.03
RDH13-202ENST00000396247 PTPRCP08575 1304 aa21.46■■□□□ 1.03
RDH13-202ENST00000396247 RWDD1Q9H446 243 aaPredicted RBP21.45■■□□□ 1.02
RDH13-202ENST00000396247 SKAP1Q86WV1 359 aa21.45■■□□□ 1.02
RDH13-202ENST00000396247 IPO9Q96P70 1041 aaKnown RBP21.45■■□□□ 1.02
RDH13-202ENST00000396247 COL5A2P05997 1499 aaPredicted RBP21.44■■□□□ 1.02
RDH13-202ENST00000396247 BTBD11A6QL63 1104 aa21.44■■□□□ 1.02
RDH13-202ENST00000396247 CCDC30Q5VVM6 783 aa21.44■■□□□ 1.02
RDH13-202ENST00000396247 STK31Q9BXU1 1019 aa21.44■■□□□ 1.02
RDH13-202ENST00000396247 AHDC1Q5TGY3 1603 aaPredicted RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms