RNA–Protein interactions for RNA: ENST00000396212.6

CCP110-203, Transcript of centriolar coiled-coil protein 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCP110, Length 5,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-203ENST00000396212 HDGFL1Q5TGJ6 251 aa16.68■□□□□ 0.26
CCP110-203ENST00000396212 CCDC43Q96MW1 224 aaKnown RBP16.68■□□□□ 0.26
CCP110-203ENST00000396212 GAPVD1Q14C86 1478 aa16.68■□□□□ 0.26
CCP110-203ENST00000396212 KIF2AO00139 706 aaPredicted RBP16.68■□□□□ 0.26
CCP110-203ENST00000396212 TTC39AQ5SRH9 613 aa16.68■□□□□ 0.26
CCP110-203ENST00000396212 TBC1D2BQ9UPU7 963 aa16.68■□□□□ 0.26
CCP110-203ENST00000396212 MCM5P33992 734 aa16.68■□□□□ 0.26
CCP110-203ENST00000396212 LRPPRCP42704 1394 aaKnown RBP16.67■□□□□ 0.26
CCP110-203ENST00000396212 SYTL4Q96C24 671 aaPredicted RBP16.67■□□□□ 0.26
CCP110-203ENST00000396212 SRGAP3O43295 1099 aa16.67■□□□□ 0.26
CCP110-203ENST00000396212 ERLIN2O94905 339 aa16.67■□□□□ 0.26
CCP110-203ENST00000396212 CDK5RAP3Q96JB5 506 aa16.67■□□□□ 0.26
CCP110-203ENST00000396212 LARP6Q9BRS8 491 aaKnown RBP16.67■□□□□ 0.26
CCP110-203ENST00000396212 ARHGAP29Q52LW3 1261 aa16.67■□□□□ 0.26
CCP110-203ENST00000396212 RPAP2Q8IXW5 612 aaPredicted RBP16.67■□□□□ 0.26
CCP110-203ENST00000396212 SSH1Q8WYL5 1049 aa16.67■□□□□ 0.26
CCP110-203ENST00000396212 EPB41L2O43491 1005 aaKnown RBP16.67■□□□□ 0.26
CCP110-203ENST00000396212 SAMD1Q6SPF0 538 aaPredicted RBP16.66■□□□□ 0.26
CCP110-203ENST00000396212 TAX1BP1Q86VP1 789 aa16.66■□□□□ 0.26
CCP110-203ENST00000396212 GIMAP7Q8NHV1 300 aa16.66■□□□□ 0.26
CCP110-203ENST00000396212 ZFP91Q96JP5 570 aaPredicted RBP16.66■□□□□ 0.26
CCP110-203ENST00000396212 PRPF40BQ6NWY9 871 aaKnown RBP16.66■□□□□ 0.26
CCP110-203ENST00000396212 TMPOP42166 694 aaKnown RBP16.66■□□□□ 0.26
CCP110-203ENST00000396212 SYNJ1O43426 1573 aa16.66■□□□□ 0.26
CCP110-203ENST00000396212 TANGO6Q9C0B7 1094 aa16.65■□□□□ 0.26
CCP110-203ENST00000396212 KLHL40Q2TBA0 621 aa16.65■□□□□ 0.26
CCP110-203ENST00000396212 PRAM1Q96QH2 718 aa16.65■□□□□ 0.26
CCP110-203ENST00000396212 PLEKHH2Q8IVE3 1493 aa16.65■□□□□ 0.26
CCP110-203ENST00000396212 GOLGA6L7A0A1B0GV03 622 aa16.65■□□□□ 0.26
CCP110-203ENST00000396212 MX1P20591 662 aa16.65■□□□□ 0.26
CCP110-203ENST00000396212 DUSP27Q5VZP5 1158 aa16.65■□□□□ 0.26
CCP110-203ENST00000396212 IQCEQ6IPM2 695 aa16.65■□□□□ 0.26
CCP110-203ENST00000396212 GPATCH11Q8N954 259 aa16.65■□□□□ 0.26
CCP110-203ENST00000396212 RAPGEF4Q8WZA2 1011 aa16.65■□□□□ 0.26
CCP110-203ENST00000396212 THUMPD2Q9BTF0 503 aaKnown RBP16.65■□□□□ 0.26
CCP110-203ENST00000396212 NLRP6P59044 892 aa16.64■□□□□ 0.25
CCP110-203ENST00000396212 TBC1D9Q6ZT07 1266 aa16.64■□□□□ 0.25
CCP110-203ENST00000396212 KIAA1328Q86T90 577 aa16.64■□□□□ 0.25
CCP110-203ENST00000396212 CRACR2AQ9BSW2 395 aa16.64■□□□□ 0.25
CCP110-203ENST00000396212 ZSCAN12O43309 604 aa16.64■□□□□ 0.25
CCP110-203ENST00000396212 ENOX2Q16206 610 aaKnown RBP16.64■□□□□ 0.25
CCP110-203ENST00000396212 ANO10Q9NW15 660 aa16.64■□□□□ 0.25
CCP110-203ENST00000396212 SHTN1A0MZ66 631 aa16.63■□□□□ 0.25
CCP110-203ENST00000396212 CCDC69A6NI79 296 aa16.63■□□□□ 0.25
CCP110-203ENST00000396212 CCDC148Q8NFR7 591 aa16.63■□□□□ 0.25
CCP110-203ENST00000396212 EHBP1L1Q8N3D4 1523 aa16.63■□□□□ 0.25
CCP110-203ENST00000396212 PRIMPOLQ96LW4 560 aa16.63■□□□□ 0.25
CCP110-203ENST00000396212 CCDC158Q5M9N0 1113 aa16.63■□□□□ 0.25
CCP110-203ENST00000396212 TRIM22Q8IYM9 498 aa16.63■□□□□ 0.25
CCP110-203ENST00000396212 NUP133Q8WUM0 1156 aa16.63■□□□□ 0.25
CCP110-203ENST00000396212 STIM1Q13586 685 aa16.62■□□□□ 0.25
CCP110-203ENST00000396212 CABP1Q9NZU7 370 aa16.62■□□□□ 0.25
CCP110-203ENST00000396212 GPRASP1Q5JY77 1395 aa16.62■□□□□ 0.25
CCP110-203ENST00000396212 CCAR1Q8IX12 1150 aaKnown RBP16.62■□□□□ 0.25
CCP110-203ENST00000396212 CTDP1Q9Y5B0 961 aaPredicted RBP16.62■□□□□ 0.25
CCP110-203ENST00000396212 GBP3Q9H0R5 595 aa16.62■□□□□ 0.25
CCP110-203ENST00000396212 NSD3Q9BZ95 1437 aa16.62■□□□□ 0.25
CCP110-203ENST00000396212 NEFHP12036 1026 aa16.62■□□□□ 0.25
CCP110-203ENST00000396212 LRSAM1Q6UWE0 723 aa16.62■□□□□ 0.25
CCP110-203ENST00000396212 KRT18P05783 430 aaKnown RBP16.61■□□□□ 0.25
CCP110-203ENST00000396212 CEP135Q66GS9 1140 aa16.61■□□□□ 0.25
CCP110-203ENST00000396212 NLRP2Q9NX02 1062 aa16.61■□□□□ 0.25
CCP110-203ENST00000396212 JAKMIP3Q5VZ66 844 aa16.61■□□□□ 0.25
CCP110-203ENST00000396212 ANKRD30BQ9BXX2 1392 aa16.61■□□□□ 0.25
CCP110-203ENST00000396212 C9orf84Q5VXU9 1444 aa16.6■□□□□ 0.25
CCP110-203ENST00000396212 ARHGAP5Q13017 1502 aa16.6■□□□□ 0.25
CCP110-203ENST00000396212 KIF4BQ2VIQ3 1234 aa16.6■□□□□ 0.25
CCP110-203ENST00000396212 CDK19Q9BWU1 502 aa16.6■□□□□ 0.25
CCP110-203ENST00000396212 PLEKHH1Q9ULM0 1364 aa16.6■□□□□ 0.25
CCP110-203ENST00000396212 C8orf34Q49A92 452 aa16.6■□□□□ 0.25
CCP110-203ENST00000396212 SCAND2PQ9GZW5 306 aaPredicted RBP16.6■□□□□ 0.25
CCP110-203ENST00000396212 KIF5CO60282 957 aa16.6■□□□□ 0.25
CCP110-203ENST00000396212 TOP1P11387 765 aaKnown RBP16.6■□□□□ 0.25
CCP110-203ENST00000396212 MIS18AQ9NYP9 233 aa16.6■□□□□ 0.25
CCP110-203ENST00000396212 NAIPQ13075 1403 aa16.6■□□□□ 0.25
CCP110-203ENST00000396212 FAM177BA6PVY3 158 aa16.59■□□□□ 0.25
CCP110-203ENST00000396212 KRT32Q14532 448 aa16.59■□□□□ 0.25
CCP110-203ENST00000396212 NCOA1Q15788 1441 aa16.59■□□□□ 0.25
CCP110-203ENST00000396212 LUC7LQ9NQ29 371 aaKnown RBP16.59■□□□□ 0.25
CCP110-203ENST00000396212 DAPK1P53355 1430 aa16.59■□□□□ 0.25
CCP110-203ENST00000396212 HCLS1P14317 486 aaPredicted RBP16.59■□□□□ 0.25
CCP110-203ENST00000396212 LMAN1P49257 510 aa16.59■□□□□ 0.25
CCP110-203ENST00000396212 GUCY1B3Q02153 619 aa16.59■□□□□ 0.25
CCP110-203ENST00000396212 FKBP4Q02790 459 aaKnown RBP eCLIP16.59■□□□□ 0.25
CCP110-203ENST00000396212 NOLC1Q14978 699 aaKnown RBP eCLIP16.59■□□□□ 0.25
CCP110-203ENST00000396212 TIGD1Q96MW7 591 aa16.59■□□□□ 0.25
CCP110-203ENST00000396212 TRIM27P14373 513 aa16.59■□□□□ 0.25
CCP110-203ENST00000396212 RRS1Q15050 365 aaKnown RBP16.59■□□□□ 0.25
CCP110-203ENST00000396212 TMC6Q7Z403 805 aa16.59■□□□□ 0.25
CCP110-203ENST00000396212 NFE2L2Q16236 605 aa16.59■□□□□ 0.25
CCP110-203ENST00000396212 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.59■□□□□ 0.25
CCP110-203ENST00000396212 EIF5P55010 431 aaKnown RBP16.58■□□□□ 0.25
CCP110-203ENST00000396212 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.58■□□□□ 0.25
CCP110-203ENST00000396212 SYCP1Q15431 976 aa16.58■□□□□ 0.24
CCP110-203ENST00000396212 IPO4Q8TEX9 1081 aaKnown RBP16.58■□□□□ 0.24
CCP110-203ENST00000396212 SNW1Q13573 536 aaKnown RBP16.58■□□□□ 0.24
CCP110-203ENST00000396212 RBM33Q96EV2 1170 aaKnown RBP16.58■□□□□ 0.24
CCP110-203ENST00000396212 RAI14Q9P0K7 980 aa16.58■□□□□ 0.24
CCP110-203ENST00000396212 UVSSAQ2YD98 709 aa16.58■□□□□ 0.24
CCP110-203ENST00000396212 GIMAP6Q6P9H5 292 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms