RNA–Protein interactions for RNA: ENST00000396175.5

TRAK1-203, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRAK1, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-203ENST00000396175 EVA1CP58658 441 aa17.1■□□□□ 0.33
TRAK1-203ENST00000396175 UVSSAQ2YD98 709 aa17.1■□□□□ 0.33
TRAK1-203ENST00000396175 ANO10Q9NW15 660 aa17.1■□□□□ 0.33
TRAK1-203ENST00000396175 NSD3Q9BZ95 1437 aa17.1■□□□□ 0.33
TRAK1-203ENST00000396175 IQCEQ6IPM2 695 aa17.1■□□□□ 0.33
TRAK1-203ENST00000396175 ZNF692Q9BU19 519 aaPredicted RBP17.1■□□□□ 0.33
TRAK1-203ENST00000396175 TNNT1P13805 278 aa17.1■□□□□ 0.33
TRAK1-203ENST00000396175 FERMT3Q86UX7 667 aa17.1■□□□□ 0.33
TRAK1-203ENST00000396175 CCDC102AQ96A19 550 aa17.1■□□□□ 0.33
TRAK1-203ENST00000396175 RAD21O60216 631 aa17.1■□□□□ 0.33
TRAK1-203ENST00000396175 STIM1Q13586 685 aa17.1■□□□□ 0.33
TRAK1-203ENST00000396175 CAMK4Q16566 473 aa17.1■□□□□ 0.33
TRAK1-203ENST00000396175 CCDC181Q5TID7 509 aa17.1■□□□□ 0.33
TRAK1-203ENST00000396175 EXOC6BQ9Y2D4 811 aa17.1■□□□□ 0.33
TRAK1-203ENST00000396175 ZSCAN12O43309 604 aa17.09■□□□□ 0.33
TRAK1-203ENST00000396175 AACSQ86V21 672 aa17.09■□□□□ 0.33
TRAK1-203ENST00000396175 ATAD2Q6PL18 1390 aa17.09■□□□□ 0.33
TRAK1-203ENST00000396175 CCDC158Q5M9N0 1113 aa17.09■□□□□ 0.33
TRAK1-203ENST00000396175 CDKL5O76039 1030 aa17.09■□□□□ 0.33
TRAK1-203ENST00000396175 ERLIN2O94905 339 aa17.09■□□□□ 0.33
TRAK1-203ENST00000396175 CFAP100Q494V2 611 aa17.09■□□□□ 0.33
TRAK1-203ENST00000396175 CCDC83Q8IWF9 413 aa17.09■□□□□ 0.33
TRAK1-203ENST00000396175 PRM3Q9NNZ6 103 aa17.09■□□□□ 0.33
TRAK1-203ENST00000396175 SYNJ2O15056 1496 aa17.09■□□□□ 0.33
TRAK1-203ENST00000396175 MAP3K1Q13233 1512 aa17.09■□□□□ 0.33
TRAK1-203ENST00000396175 IGHDP01880 384 aa17.08■□□□□ 0.33
TRAK1-203ENST00000396175 CDK19Q9BWU1 502 aa17.08■□□□□ 0.33
TRAK1-203ENST00000396175 HSP90AB2PQ58FF8 381 aa17.08■□□□□ 0.32
TRAK1-203ENST00000396175 ARHGAP29Q52LW3 1261 aa17.08■□□□□ 0.32
TRAK1-203ENST00000396175 GLRX3O76003 335 aaKnown RBP17.08■□□□□ 0.32
TRAK1-203ENST00000396175 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.08■□□□□ 0.328e-7■■■■■ 31.6
TRAK1-203ENST00000396175 AQRO60306 1485 aaKnown RBP eCLIP17.07■□□□□ 0.322e-8■■■■□ 22.9
TRAK1-203ENST00000396175 TRIM34Q9BYJ4 488 aa17.07■□□□□ 0.32
TRAK1-203ENST00000396175 CLIP2Q9UDT6 1046 aa17.07■□□□□ 0.32
TRAK1-203ENST00000396175 KIF1BPQ96EK5 621 aa17.07■□□□□ 0.32
TRAK1-203ENST00000396175 CTNNA3Q9UI47 895 aa17.07■□□□□ 0.32
TRAK1-203ENST00000396175 PRG4Q92954 1404 aaPredicted RBP17.07■□□□□ 0.32
TRAK1-203ENST00000396175 HECW1Q76N89 1606 aa17.07■□□□□ 0.32
TRAK1-203ENST00000396175 GOLGA6L7A0A1B0GV03 622 aa17.07■□□□□ 0.32
TRAK1-203ENST00000396175 CTAGE5O15320 804 aa17.07■□□□□ 0.32
TRAK1-203ENST00000396175 EPB41L2O43491 1005 aaKnown RBP17.07■□□□□ 0.32
TRAK1-203ENST00000396175 TRIM27P14373 513 aa17.07■□□□□ 0.32
TRAK1-203ENST00000396175 HSP90AB3PQ58FF7 597 aa17.07■□□□□ 0.32
TRAK1-203ENST00000396175 ODF2Q5BJF6 829 aa17.07■□□□□ 0.32
TRAK1-203ENST00000396175 PPP4R3BQ5MIZ7 849 aa17.07■□□□□ 0.32
TRAK1-203ENST00000396175 NLRP2Q9NX02 1062 aa17.07■□□□□ 0.32
TRAK1-203ENST00000396175 ADCY5O95622 1261 aa17.06■□□□□ 0.32
TRAK1-203ENST00000396175 TBC1D9Q6ZT07 1266 aa17.06■□□□□ 0.32
TRAK1-203ENST00000396175 CCDC43Q96MW1 224 aaKnown RBP17.06■□□□□ 0.32
TRAK1-203ENST00000396175 DDX19AQ9NUU7 478 aaKnown RBP17.06■□□□□ 0.32
TRAK1-203ENST00000396175 RAB11FIP3O75154 756 aa17.06■□□□□ 0.32
TRAK1-203ENST00000396175 LIMCH1Q9UPQ0 1083 aa17.06■□□□□ 0.32
TRAK1-203ENST00000396175 SIL1Q9H173 461 aa17.06■□□□□ 0.32
TRAK1-203ENST00000396175 C16orf45Q96MC5 204 aaPredicted RBP17.05■□□□□ 0.32
TRAK1-203ENST00000396175 RPGRIP1LQ68CZ1 1315 aa17.05■□□□□ 0.32
TRAK1-203ENST00000396175 GRIN2BQ13224 1484 aa17.05■□□□□ 0.32
TRAK1-203ENST00000396175 ZSCAN23Q3MJ62 389 aa17.05■□□□□ 0.32
TRAK1-203ENST00000396175 TTC39AQ5SRH9 613 aa17.05■□□□□ 0.32
TRAK1-203ENST00000396175 NUTM2GQ5VZR2 741 aa17.05■□□□□ 0.32
TRAK1-203ENST00000396175 CDK5RAP3Q96JB5 506 aa17.05■□□□□ 0.32
TRAK1-203ENST00000396175 FYB1O15117 783 aa17.05■□□□□ 0.32
TRAK1-203ENST00000396175 URI1O94763 535 aaPredicted RBP17.05■□□□□ 0.32
TRAK1-203ENST00000396175 LRSAM1Q6UWE0 723 aa17.04■□□□□ 0.32
TRAK1-203ENST00000396175 CCAR1Q8IX12 1150 aaKnown RBP17.04■□□□□ 0.32
TRAK1-203ENST00000396175 SMARCA5O60264 1052 aaPredicted RBP17.04■□□□□ 0.32
TRAK1-203ENST00000396175 NUTM1Q86Y26 1132 aa17.04■□□□□ 0.32
TRAK1-203ENST00000396175 DDX11Q96FC9 970 aa17.04■□□□□ 0.32
TRAK1-203ENST00000396175 CRACR2AQ9BSW2 395 aa17.04■□□□□ 0.32
TRAK1-203ENST00000396175 NOL7Q9UMY1 257 aaKnown RBP17.04■□□□□ 0.32
TRAK1-203ENST00000396175 GSDMDP57764 484 aa17.03■□□□□ 0.32
TRAK1-203ENST00000396175 RPRD2Q5VT52 1461 aaKnown RBP17.03■□□□□ 0.32
TRAK1-203ENST00000396175 PANK2Q9BZ23 570 aa17.03■□□□□ 0.32
TRAK1-203ENST00000396175 CAVIN2O95810 425 aa17.03■□□□□ 0.32
TRAK1-203ENST00000396175 PRPF40BQ6NWY9 871 aaKnown RBP17.03■□□□□ 0.32
TRAK1-203ENST00000396175 C8orf34Q49A92 452 aa17.03■□□□□ 0.32
TRAK1-203ENST00000396175 NACAP1Q9BZK3 213 aa17.03■□□□□ 0.32
TRAK1-203ENST00000396175 ZHX1Q9UKY1 873 aaPredicted RBP17.03■□□□□ 0.32
TRAK1-203ENST00000396175 SLC3A2P08195 630 aaKnown RBP17.02■□□□□ 0.32
TRAK1-203ENST00000396175 FAM193AP78312 1265 aa17.02■□□□□ 0.32
TRAK1-203ENST00000396175 ABTB2Q8N961 1025 aa17.02■□□□□ 0.32
TRAK1-203ENST00000396175 CCDC148Q8NFR7 591 aa17.02■□□□□ 0.32
TRAK1-203ENST00000396175 CCDC69A6NI79 296 aa17.02■□□□□ 0.31
TRAK1-203ENST00000396175 HDAC1Q13547 482 aaPredicted RBP17.02■□□□□ 0.31
TRAK1-203ENST00000396175 ZSCAN25Q6NSZ9 544 aa17.02■□□□□ 0.31
TRAK1-203ENST00000396175 PAXBP1Q9Y5B6 917 aa17.01■□□□□ 0.31
TRAK1-203ENST00000396175 LRRFIP2Q9Y608 721 aaKnown RBP17.01■□□□□ 0.31
TRAK1-203ENST00000396175 UBE2HP62256 183 aa17.01■□□□□ 0.31
TRAK1-203ENST00000396175 MAP9Q49MG5 647 aa17.01■□□□□ 0.31
TRAK1-203ENST00000396175 SLC52A1Q9NWF4 448 aa17.01■□□□□ 0.31
TRAK1-203ENST00000396175 HS1BP3Q53T59 392 aa17.01■□□□□ 0.31
TRAK1-203ENST00000396175 SNX21Q969T3 373 aa17.01■□□□□ 0.31
TRAK1-203ENST00000396175 THUMPD2Q9BTF0 503 aaKnown RBP17.01■□□□□ 0.31
TRAK1-203ENST00000396175 RBM27Q9P2N5 1060 aaKnown RBP17.01■□□□□ 0.31
TRAK1-203ENST00000396175 ZKSCAN5Q9Y2L8 839 aa17.01■□□□□ 0.31
TRAK1-203ENST00000396175 CKAP2LQ8IYA6 745 aa17■□□□□ 0.31
TRAK1-203ENST00000396175 GDPD2Q9HCC8 539 aa17■□□□□ 0.31
TRAK1-203ENST00000396175 KIF5CO60282 957 aa17■□□□□ 0.31
TRAK1-203ENST00000396175 TOP1P11387 765 aaKnown RBP17■□□□□ 0.31
TRAK1-203ENST00000396175 ZFYVE27Q5T4F4 411 aa17■□□□□ 0.31
TRAK1-203ENST00000396175 JAKMIP3Q5VZ66 844 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms