RNA–Protein interactions for RNA: ENST00000396020.7

RPS29-202, Transcript of ribosomal protein S29, humanhuman

TSL 1 (best) BASIC

Gene RPS29, Length 7,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29-202ENST00000396020 GOPCQ9HD26 462 aa8.59□□□□□ -1.03
RPS29-202ENST00000396020 ZNHIT6Q9NWK9 470 aaKnown RBP8.59□□□□□ -1.03
RPS29-202ENST00000396020 HIP1O00291 1037 aa8.59□□□□□ -1.03
RPS29-202ENST00000396020 KIAA1328Q86T90 577 aa8.59□□□□□ -1.03
RPS29-202ENST00000396020 NEBLO76041 1014 aa8.59□□□□□ -1.03
RPS29-202ENST00000396020 CASQ1P31415 396 aa8.59□□□□□ -1.03
RPS29-202ENST00000396020 ZNF76P36508 570 aa8.59□□□□□ -1.03
RPS29-202ENST00000396020 MRE11P49959 708 aa8.59□□□□□ -1.03
RPS29-202ENST00000396020 NBPF1Q3BBV0 1214 aa8.59□□□□□ -1.03
RPS29-202ENST00000396020 IL27Q8NEV9 243 aa8.59□□□□□ -1.03
RPS29-202ENST00000396020 THOC2Q8NI27 1593 aaKnown RBP8.59□□□□□ -1.03
RPS29-202ENST00000396020 BTBD11A6QL63 1104 aa8.59□□□□□ -1.03
RPS29-202ENST00000396020 SLC4A8Q2Y0W8 1093 aa8.59□□□□□ -1.04
RPS29-202ENST00000396020 CFAP43Q8NDM7 1665 aa8.58□□□□□ -1.04
RPS29-202ENST00000396020 LRRCC1Q9C099 1032 aa8.58□□□□□ -1.04
RPS29-202ENST00000396020 KIAA0754O94854 1291 aa8.58□□□□□ -1.04
RPS29-202ENST00000396020 TAF3Q5VWG9 929 aa8.58□□□□□ -1.04
RPS29-202ENST00000396020 ZSCAN29Q8IWY8 852 aaPredicted RBP8.58□□□□□ -1.04
RPS29-202ENST00000396020 EXOSC9Q06265 439 aaKnown RBP8.58□□□□□ -1.04
RPS29-202ENST00000396020 ANKLE2Q86XL3 938 aa8.58□□□□□ -1.04
RPS29-202ENST00000396020 CCDC85AQ96PX6 553 aaPredicted RBP8.58□□□□□ -1.04
RPS29-202ENST00000396020 AACSQ86V21 672 aa8.58□□□□□ -1.04
RPS29-202ENST00000396020 BCCIPQ9P287 314 aaKnown RBP eCLIP8.58□□□□□ -1.04
RPS29-202ENST00000396020 SLC4A2P04920 1241 aa8.58□□□□□ -1.04
RPS29-202ENST00000396020 ANKRD18AQ8IVF6 992 aa8.58□□□□□ -1.04
RPS29-202ENST00000396020 CYP46A1Q9Y6A2 500 aa8.58□□□□□ -1.04
RPS29-202ENST00000396020 CFAP65Q6ZU64 1925 aaKnown RBP8.58□□□□□ -1.04
RPS29-202ENST00000396020 TATP17735 454 aaPredicted RBP8.57□□□□□ -1.04
RPS29-202ENST00000396020 CEP57L1Q8IYX8 460 aa8.57□□□□□ -1.04
RPS29-202ENST00000396020 GNL3LQ9NVN8 582 aaKnown RBP8.57□□□□□ -1.04
RPS29-202ENST00000396020 SSBP05455 408 aaKnown RBP eCLIP8.57□□□□□ -1.04
RPS29-202ENST00000396020 ERC1Q8IUD2 1116 aa8.57□□□□□ -1.04
RPS29-202ENST00000396020 PRDM10Q9NQV6 1147 aa8.57□□□□□ -1.04
RPS29-202ENST00000396020 DACH1Q9UI36 760 aa8.57□□□□□ -1.04
RPS29-202ENST00000396020 LRRFIP2Q9Y608 721 aaKnown RBP8.57□□□□□ -1.04
RPS29-202ENST00000396020 STIM1Q13586 685 aa8.57□□□□□ -1.04
RPS29-202ENST00000396020 CABP1Q9NZU7 370 aa8.57□□□□□ -1.04
RPS29-202ENST00000396020 TWISTNBQ3B726 338 aaPredicted RBP8.57□□□□□ -1.04
RPS29-202ENST00000396020 CLASRPQ8N2M8 674 aaKnown RBP8.57□□□□□ -1.04
RPS29-202ENST00000396020 PDRG1Q9NUG6 133 aa8.57□□□□□ -1.04
RPS29-202ENST00000396020 RPGRIP1LQ68CZ1 1315 aa8.57□□□□□ -1.04
RPS29-202ENST00000396020 PRKAR2BP31323 418 aa8.57□□□□□ -1.04
RPS29-202ENST00000396020 TDO2P48775 406 aa8.57□□□□□ -1.04
RPS29-202ENST00000396020 ZNF692Q9BU19 519 aaPredicted RBP8.56□□□□□ -1.04
RPS29-202ENST00000396020 MIS18AQ9NYP9 233 aa8.56□□□□□ -1.04
RPS29-202ENST00000396020 TOM1L2Q6ZVM7 507 aa8.56□□□□□ -1.04
RPS29-202ENST00000396020 XPCQ01831 940 aaPredicted RBP8.56□□□□□ -1.04
RPS29-202ENST00000396020 SOGA3Q5TF21 947 aa8.56□□□□□ -1.04
RPS29-202ENST00000396020 SLC52A1Q9NWF4 448 aa8.56□□□□□ -1.04
RPS29-202ENST00000396020 CCDC192P0DO97 292 aa8.56□□□□□ -1.04
RPS29-202ENST00000396020 K7ELQ4 463 aaPredicted RBP8.56□□□□□ -1.04
RPS29-202ENST00000396020 MYCNP04198 464 aaPredicted RBP8.56□□□□□ -1.04
RPS29-202ENST00000396020 CASTP20810 708 aaKnown RBP8.56□□□□□ -1.04
RPS29-202ENST00000396020 RRS1Q15050 365 aaKnown RBP8.55□□□□□ -1.04
RPS29-202ENST00000396020 NUTM1Q86Y26 1132 aa8.55□□□□□ -1.04
RPS29-202ENST00000396020 CCDC66A2RUB6 948 aa8.55□□□□□ -1.04
RPS29-202ENST00000396020 SMARCA5O60264 1052 aaPredicted RBP8.55□□□□□ -1.04
RPS29-202ENST00000396020 AEBP1Q8IUX7 1158 aa8.55□□□□□ -1.04
RPS29-202ENST00000396020 TTC16Q8NEE8 873 aa8.55□□□□□ -1.04
RPS29-202ENST00000396020 JAKMIP1Q96N16 626 aaKnown RBP8.55□□□□□ -1.04
RPS29-202ENST00000396020 CCDC113Q9H0I3 377 aa8.55□□□□□ -1.04
RPS29-202ENST00000396020 SF3B2Q13435 895 aaKnown RBP8.55□□□□□ -1.04
RPS29-202ENST00000396020 CCDC57Q2TAC2 916 aa8.55□□□□□ -1.04
RPS29-202ENST00000396020 CCDC178Q5BJE1 867 aa8.55□□□□□ -1.04
RPS29-202ENST00000396020 SPG7Q9UQ90 795 aa8.55□□□□□ -1.04
RPS29-202ENST00000396020 CCDC102AQ96A19 550 aa8.55□□□□□ -1.04
RPS29-202ENST00000396020 DDX11Q96FC9 970 aa8.55□□□□□ -1.04
RPS29-202ENST00000396020 SPATA32Q96LK8 384 aa8.55□□□□□ -1.04
RPS29-202ENST00000396020 ZNF608Q9ULD9 1512 aaPredicted RBP8.55□□□□□ -1.04
RPS29-202ENST00000396020 TNNT1P13805 278 aa8.55□□□□□ -1.04
RPS29-202ENST00000396020 NSD3Q9BZ95 1437 aa8.54□□□□□ -1.04
RPS29-202ENST00000396020 CBFA2T2O43439 604 aa8.54□□□□□ -1.04
RPS29-202ENST00000396020 GRPEL1Q9HAV7 217 aa8.54□□□□□ -1.04
RPS29-202ENST00000396020 KAT6BQ8WYB5 2073 aa8.54□□□□□ -1.04
RPS29-202ENST00000396020 LARP1BQ659C4 914 aaKnown RBP8.54□□□□□ -1.04
RPS29-202ENST00000396020 PSMD1Q99460 953 aa8.54□□□□□ -1.04
RPS29-202ENST00000396020 FANCAO15360 1455 aa8.54□□□□□ -1.04
RPS29-202ENST00000396020 ABCC5O15440 1437 aa8.54□□□□□ -1.04
RPS29-202ENST00000396020 TICAM2Q86XR7 235 aa8.54□□□□□ -1.04
RPS29-202ENST00000396020 MPHOSPH8Q99549 860 aa8.54□□□□□ -1.04
RPS29-202ENST00000396020 SLC12A5Q9H2X9 1139 aa8.54□□□□□ -1.04
RPS29-202ENST00000396020 MAP3K1Q13233 1512 aa8.54□□□□□ -1.04
RPS29-202ENST00000396020 DHX8Q14562 1220 aaKnown RBP8.54□□□□□ -1.04
RPS29-202ENST00000396020 ANKRD1Q15327 319 aa8.54□□□□□ -1.04
RPS29-202ENST00000396020 CHD1LQ86WJ1 897 aa8.54□□□□□ -1.04
RPS29-202ENST00000396020 LIG1P18858 919 aa8.53□□□□□ -1.04
RPS29-202ENST00000396020 JAKMIP3Q5VZ66 844 aa8.53□□□□□ -1.04
RPS29-202ENST00000396020 RAI14Q9P0K7 980 aa8.53□□□□□ -1.04
RPS29-202ENST00000396020 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.53□□□□□ -1.04
RPS29-202ENST00000396020 GOLGA6L10A0A0M3HER8 536 aa8.53□□□□□ -1.04
RPS29-202ENST00000396020 TCP11L2Q8N4U5 519 aa8.53□□□□□ -1.04
RPS29-202ENST00000396020 LARP6Q9BRS8 491 aaKnown RBP8.53□□□□□ -1.04
RPS29-202ENST00000396020 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.53□□□□□ -1.04
RPS29-202ENST00000396020 NOL7Q9UMY1 257 aaKnown RBP8.53□□□□□ -1.04
RPS29-202ENST00000396020 DNA2P51530 1060 aa8.53□□□□□ -1.04
RPS29-202ENST00000396020 GUCY1B3Q02153 619 aa8.53□□□□□ -1.04
RPS29-202ENST00000396020 SULT6B1Q6IMI4 303 aa8.53□□□□□ -1.04
RPS29-202ENST00000396020 TRIM22Q8IYM9 498 aa8.53□□□□□ -1.04
RPS29-202ENST00000396020 TERF1P54274 439 aa8.53□□□□□ -1.04
RPS29-202ENST00000396020 NBPF8Q3BBV2 869 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms